Smos017621.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- Snapc4
- Assembly
- GCA_009176505.1
- Location
- VUAH01000074.1:342918-345930[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.3 4.6e+03 -2.0 0.0 2 18 133 149 132 150 0.87 2 5 7.3e-13 1e-09 38.5 0.0 1 44 238 282 238 284 0.96 3 5 2.9e-12 4e-09 36.6 0.0 3 43 294 338 292 341 0.96 4 5 5e-08 6.9e-05 23.0 0.0 2 46 348 393 347 393 0.90 5 5 6.2e-12 8.6e-09 35.5 0.2 1 44 399 443 399 445 0.95
Sequence Information
- Coding Sequence
- ATGTCACGCTCATCTGTGAATGGCAGTGAATACGATGAATACGTGCTTGACGAAGCGGATTATGTGCGAGAAGCCGAACAAACTGTGTACAATCACAACGAgatatcaattgaaaatgcccTCACCCTGAACAAACACATGCGAATTTACTTAAACGATTTGAAACACGAGCTGGAGCAATTGATCAACGTGTGCCAACAGAAgtacaaacaaaacgaattgtTGATTGCCGcaacaaacaaagcaaaaaatgaaccgaaacTCTATACGACATACTATTTTTGTGGTTATCCATTTTTCAAAGATCGAAAGGGTGGCGCACCACCACAATCGGCCGAATATTTGAAACGCACCGAAAAAGGCGATGAAATTTTCCCATTGGATCTAGAGAAGCGATGTGTTTGGCTGCCTCGAGACAAAGTTCAGTTGGTGCAAGGCGTTAAGAAGCAAGTGATCACATACTTACAGTCACAAAATCGGACGAAAATTCGAAAGACAGTCGGCAAACGATGCGCTAGCGAACTGTCAGCTAGGATTCAAAATGAAAGTTCTTCTTTCGAATCGATGCATTTGAAGGATTTGCTCAAAAAGACGGAGGGAAGTAATTTCCGAATAAATTGGCTGGATGTTTCAATGAACGCTCTGGATGATCGGCATCCGCCTAATGAGTGCATGGGAATGTGGTATGGTTACTTAATGCCAACATTGAATCGTCAACCATGGACACCGGCCGAAGAAGATAAATTATTGAATGCTGCAAATGATTTTGAGCATCAAGATTGGGCGGAAATCGCAAAAGAAGTGGATGGTCGATCAGCTTATCAATGCTTTGTCCATTatcaaacgaaattcaatcCAAAACATGTGCAGAAAAATGTTCGTTGGACACCCGAAGAGGATAAGAAGCTGCTggatttcattgaaaagtaTCGAATCGGTAATATCATACCGTGGACTAAGATTATGGAGAAATGTCCGGGTCGTTCAAAGCCACAGCTTTACAATCGGTACATGTTTTCATTACATCCGGAGATAAATCGAGCGCCGTTTACCGTTGAAGAGGACTGTATATTGATGGCAGCCATTAAGGAGTACGGACTGAATTTCTGTgaatttccatcgaatttgTTGCCCGGTCGAAATATGCGGCAAATTCGAAGCCGCTATAACAATGTTTTGCGGCATGTAAATGTACGTGAACATTGGACGGAACAACATGACATTAAACTAATGGAATTGATTGATCGTTATGGTACATCTGACTGGGTACGCATATCCGATGAGATGGTGAGTCATACGCGGACATCATGCCGTCAAAGATACACCACGATTCGGAAATTTCTTGATAAATATCCTAGCAAAACGGTATCGGATGTTCCACGCAGAAAACGACCCTTCTCAACGAATGTAACAACGGAGAACTGGATGGAAGCGATCATTGAAGCCAAGAATTTCGAATCAATCACCGCAGcaagtgaagaagaagaagacgaagcGGAGAACTCAATACTACCACGAGGAAAATCAGTGGCCCAAAGCCTTCATAATACGGACTATTATGATTTcctaaaatattcattcaactTTAAATTTGGTGAAGCGATTCCCGGCAGCGATGCACTCTTCGAGAACATACAAATCGCATGCCAATTGTTACGAGCATCGAATTtgccaaacaaaataaatacgtATGACCAATCGTTTAGCTGCTACGTGACAATGAAAAATCCCTGTAAGAAGGTGCAATTAGAGGTGGACCTACTAAGATCGCTCAGCGAACTGggtcgaaatgattttttatatCCGGTAAATGTGAATACGGTGCTTGGTTTGCGTGGCATAACAGCAATGCTTGCGCTAGCAAGTGAAGAGAAGAAAGGACCacggaaaaagaagaaaattccaGAGACAGAAATCAAACCGGAATCAAACAGCGTACAAGATTATCAGGCATTGGATTTGTTCAAAatgcgattcaattcaatcttCAAGCAAACAGCGACACTGGCCAAGATGCATCGACAAATTACTTCGGTGTCACTACGACTGCGGAATCAAAAGCGAAAACGAGTGACCATACCCACATCTACGGTGACATCAACATCAgttgcagcagcagccacaACCACTGACTTCCATAATAATGAAACATTGGTGCGAATATCTGCCGCCAATCAGAGCAACGACGAAGAGTTTGAGAGCTACATCATGAGTGAAACCGAAGAGAAACCATGCAAACGAAATCGAATCACTGTACTTGAAAGCATCACCGTCGGATTGAATGATATAGAAGAAGTTGATCCACTGCAATTGCCACCACCAACCGTTTCCaatgattcattcaatttctacACTCGATACAGAGTCGAAACATCGGATACAGTTCAAGAAATTAATATACAGCCGGATGTGAGTGGCAGTGAAACTGAAGGCTTTGCCGATGATCAGAGCACATATTCCAATACAGATTTTGTCATTTGGACACCAACCATCACTGACGAAGCGACTGGATCATCTCAGCAGTGA
- Protein Sequence
- MSRSSVNGSEYDEYVLDEADYVREAEQTVYNHNEISIENALTLNKHMRIYLNDLKHELEQLINVCQQKYKQNELLIAATNKAKNEPKLYTTYYFCGYPFFKDRKGGAPPQSAEYLKRTEKGDEIFPLDLEKRCVWLPRDKVQLVQGVKKQVITYLQSQNRTKIRKTVGKRCASELSARIQNESSSFESMHLKDLLKKTEGSNFRINWLDVSMNALDDRHPPNECMGMWYGYLMPTLNRQPWTPAEEDKLLNAANDFEHQDWAEIAKEVDGRSAYQCFVHYQTKFNPKHVQKNVRWTPEEDKKLLDFIEKYRIGNIIPWTKIMEKCPGRSKPQLYNRYMFSLHPEINRAPFTVEEDCILMAAIKEYGLNFCEFPSNLLPGRNMRQIRSRYNNVLRHVNVREHWTEQHDIKLMELIDRYGTSDWVRISDEMVSHTRTSCRQRYTTIRKFLDKYPSKTVSDVPRRKRPFSTNVTTENWMEAIIEAKNFESITAASEEEEDEAENSILPRGKSVAQSLHNTDYYDFLKYSFNFKFGEAIPGSDALFENIQIACQLLRASNLPNKINTYDQSFSCYVTMKNPCKKVQLEVDLLRSLSELGRNDFLYPVNVNTVLGLRGITAMLALASEEKKGPRKKKKIPETEIKPESNSVQDYQALDLFKMRFNSIFKQTATLAKMHRQITSVSLRLRNQKRKRVTIPTSTVTSTSVAAAATTTDFHNNETLVRISAANQSNDEEFESYIMSETEEKPCKRNRITVLESITVGLNDIEEVDPLQLPPPTVSNDSFNFYTRYRVETSDTVQEINIQPDVSGSETEGFADDQSTYSNTDFVIWTPTITDEATGSSQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -