Smos014068.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_009176505.1
- Location
- VUAH01006225.1:10961438-10970534[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-17 1.1e-14 53.9 0.1 1 45 356 401 356 401 0.96 2 2 1.6e-18 1.7e-15 56.5 0.0 1 43 785 828 785 830 0.95
Sequence Information
- Coding Sequence
- ATGAGCTTAGAACGAATTGCTGAAGAATTGATGGGTCGCAGGAAATGGAAACTATATCAAGAAGTCCTTGTGCGTTCCCATTCGAATTCAAATacaacagtaacaacagcCAATCAAATCAACAATATTACCGAAACCGTTTTACGAAATAAAAGTTTTCTGATAGACGTGCATTGCAACAACGGCGAAGGGAATTCGTCATCGcttcaacaaaatacacaaaactcATCACGTGCCGACAACGTCAGCCAGCAACAGCAActacaacagcaacaagaaCTACAGAATTTGAAACAATCCATCATTCCACAAGAAAAGCTAGAAAACGCTCTTGGGACAAAAACGAGCGACAAAGATAATACAGATAATAAATTGGTCACAGAGCAAAGTTCCGAAATCGGAAATTCTGACAAAAACCTAGACGATAATTCGCATAATAACAATAGTATTAGTGACGAAGCAAACGATCAAGAGAAATTACCAACGCCCATCGATTGGAAGCCACAAGAAAATTGTTACTTTTGTGTGGACGGCAAATTACTCACCGTGAACGACAAAGGAGACTTAGTGGCAGAGTCGGGTTCGGTGAATACCGAACCAGAACTCGCCAACAGAACGATAATAGAGTCAGACTCTGACTCTAGTGTTTGTTCTGAGCCCGAAATTGCAAATTACAACACACCATTGAATAAGATAAACAAGCAATCGCCATCCGTAGCCGATCTGTTACGTAATTCACTATTACAGCAGAATATGACTTCCTTTGAATCGATGACAGCACAGTTAGCAACCATCGCATCGCTAAATGGACTATCACCGTTATATCCAGGGTTAATCTATAATCCGTTTATGCATCAAATGCATTCGAACGCAACGACTACGACCGAATCCACGTCTGCTGAAAGTCCAGGTGCAAAGCCATCACCGAGCCCAGTTGATCTGAATACAGAACAGCCGCTTGATTTAAGCGCTAAGCCATCAACAACGCCAACACTTTCCAATGATCCGAAACAAGTTTTCAGAGCGAAACCACGTCTGTCAACTGTGGCCGGTCGAAAAACATACACTGAAGAGGAGTTACAAAATGCCCTTGAAGCGATTCTAAGTGGAAAACTTGGCACACGAAGAGCTGCCGTACTTTATGGTATACCGAGATCGACTTTACGAAACAAAGTCTATAAATTGGCTATGGAGCAAAAACGGGAAGCAAATCTGCTAAATCAAGCCTCTGTTTTAGATGACcttgacgatgatgacgataaGGAATTGTCTGGCGGCGAAGAAGACAAACTGAAAGATGATTCAATGCTCACACCCGAAGAAATGATTCGGCTCTCATCATCTCGTGCATCCTCGGCGGCCGCCAGTCTGCAGAAGATTTTCGAGAACAACAGTCCAAAATCGGATGGCCTCACAGCGCCCACCTCGCATCCGATGCAATCGAATAAATCACAAACATCCACGTCAACCACTTCCTCACCGCCCCTGGTCAACAATCCATGGCTTAACCCAGACATGTTCTCCAATCTGCTGCTAGCCACCGGCCTAATGCAGCAAAAATATGACGATCCAACGTTCCAGGAGATTTTGCGCAGTCTATTGATACGGCAACAGGAATTGATGAAGCTGAACACAGCGAATCAAACGACGTCACCCACAAAGGCAACGGTCGATCATTTGAACAATGGTAAGCCATCGGATTCGAGAAATCTAATGCACAACATTTCATTgcttcaacaacaacaaaatagactGATCAAGTCCGAAACACCAGACACAGTGCCGACATTAGATTTGAACAATGCCGATGAAGCGGCTGCTCTTCTAAAAATTCCGTCCTATTCCAAATTATTGGGATCATCGTCATCGACCAGTGGCAAGAATGGTGATAACGCAAACGATTCCACTCCGCAAACGACACCGCCATTGCATTCACGTAGTCCTCAGGCGCATCTATCGACCGACGTATCGCCGCCGGTCAATCGACAAAACAATGATTCTCAATCGCCACCGATACCGGGCATTGGCAGCAAGGGGATGCTATCGCTGCGCGATGTTATTGCCAAAAGTATCACTAGAACGTTTAGTCAACAGAATGCGGAAACAATGAACAAGCCTTCCATGGAGCATCTAGAATACAAGCGGCCAAGCATATCGGTCATTAAGAATTTGGGCGGCACGGATATATCGAGGTTCGCCACAAATCCAAACATGATCGCCTCGATGCATTCGCACTCGCACTcgcactcacactcacactcacattcGCATCCAAACAACTCCCAATCGCCATCAAATCTAAACAACACCGGCAAAGGTACACGACCCAAGCGCGGCAAATACCGTAACTATGATCGTGACAGTTTGGTGGAAGCGGTCAAGGCCGTTCAGCGTGGCGAAATGTCAGTTCACCGAGCCGGCAGTTACTATGGTGTACCGCACTCAACGCTAGAATACAAAGTCAAAGAGAGACACTTGATGCGACCAAGAAAGCGAGAACCAAAGCCACAGCCATTGGACAGCAGTGGCGGCAGCACATCGTCGATTTCGTCGGTGAAAAGTCACGATTTGGCCGGATCGGTGAATGCGGGCATTCGTGGACTGGACAAAGCATCGAAATCGTCCATGCCAACAACAAAGACGCCAATGAAAACGCCCCCATTTCCGGCTGCATCGGAGAACGGCTTGAAAATGGGCCTGTTTGATCCGTCACAATTGCAGTATCCACCTCAATTATTCTGGCCACATGCACCCGGCTTCGCCGGTTTACCGATCGATTTCCCTCAACGAACGTCCGGAACGAGTGCCGCCGCATTCGGTGGTAATGCCGAAACCTACTTTGCAACCCAAATGATGCGCTTCCAAGAAGATGCATTACGTTCCAATGCCAACAATTCCAATAACAAATCGGACAGCGATTTAGCACGAAAGAAAAGTAAGAGCGAACGCGAATTAACATTAGAAAATCTGTACGATGGTGGCGCGAATGGCTCATTTTTGGATGGTATCATTCGTCACAGCTTAGATAGAAAATCCGATTCGATTCCACATGGTGCACTTTTAGATCAATTAGTCAAAAATAATCGACAGTCGGTGTGCGATCCGGAAAATaacaccaacagcaacaataagcGTGCGGCCAGCCCATACAGTTTTGTTCATCAGGCGATCAAGCGCGAACGAACGGGATCATCGTCCGGCGATACCGATCGTGAATCCGTTGAACGTGACATGTCCAAGGAGTCGGTCGAAACGCTGCTTAAATTCCGAGATAACCTAACCCTACGCATGGACGAGAAAAACCTCAAAGACTCTGTGGAAGATTTGAACGGGTTATCATCCGACAACAAGAGTGTCCGCAACACAGAGGCCGACGACAGTTCATAG
- Protein Sequence
- MSLERIAEELMGRRKWKLYQEVLVRSHSNSNTTVTTANQINNITETVLRNKSFLIDVHCNNGEGNSSSLQQNTQNSSRADNVSQQQQLQQQQELQNLKQSIIPQEKLENALGTKTSDKDNTDNKLVTEQSSEIGNSDKNLDDNSHNNNSISDEANDQEKLPTPIDWKPQENCYFCVDGKLLTVNDKGDLVAESGSVNTEPELANRTIIESDSDSSVCSEPEIANYNTPLNKINKQSPSVADLLRNSLLQQNMTSFESMTAQLATIASLNGLSPLYPGLIYNPFMHQMHSNATTTTESTSAESPGAKPSPSPVDLNTEQPLDLSAKPSTTPTLSNDPKQVFRAKPRLSTVAGRKTYTEEELQNALEAILSGKLGTRRAAVLYGIPRSTLRNKVYKLAMEQKREANLLNQASVLDDLDDDDDKELSGGEEDKLKDDSMLTPEEMIRLSSSRASSAAASLQKIFENNSPKSDGLTAPTSHPMQSNKSQTSTSTTSSPPLVNNPWLNPDMFSNLLLATGLMQQKYDDPTFQEILRSLLIRQQELMKLNTANQTTSPTKATVDHLNNGKPSDSRNLMHNISLLQQQQNRLIKSETPDTVPTLDLNNADEAAALLKIPSYSKLLGSSSSTSGKNGDNANDSTPQTTPPLHSRSPQAHLSTDVSPPVNRQNNDSQSPPIPGIGSKGMLSLRDVIAKSITRTFSQQNAETMNKPSMEHLEYKRPSISVIKNLGGTDISRFATNPNMIASMHSHSHSHSHSHSHSHPNNSQSPSNLNNTGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDSSGGSTSSISSVKSHDLAGSVNAGIRGLDKASKSSMPTTKTPMKTPPFPAASENGLKMGLFDPSQLQYPPQLFWPHAPGFAGLPIDFPQRTSGTSAAAFGGNAETYFATQMMRFQEDALRSNANNSNNKSDSDLARKKSKSERELTLENLYDGGANGSFLDGIIRHSLDRKSDSIPHGALLDQLVKNNRQSVCDPENNTNSNNKRAASPYSFVHQAIKRERTGSSSGDTDRESVERDMSKESVETLLKFRDNLTLRMDEKNLKDSVEDLNGLSSDNKSVRNTEADDSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00133164;
- 90% Identity
- iTF_00133164; iTF_00367149;
- 80% Identity
- -