Smos004824.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- kn
- Assembly
- GCA_009176505.1
- Location
- VUAH01006164.1:2592923-2598134[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-112 1.5e-108 363.7 0.0 205 385 1 206 1 211 0.99 2 2 1.5e-08 0.00014 20.4 14.6 426 517 213 307 207 332 0.64
Sequence Information
- Coding Sequence
- ATGCGAAGATTTCAAGTGGTAATTGCAACACAAGTTTCAGTCGAAGGTCCACTGATGGCCATCTCCGATCAAATGTTTGTGCACAACAATTCGAAGCATGGGCGACGAGCCAAGCGATTGGACGCAAGCGATGGTACATCACCGTTATCAATTTCACATCCATTGGCTCCAGACAGTACGTACGATgGTCTCTACCCACCGATGCCTGTTGCAACACCGTGTATAAAAGCAATATCACCAACTGAAGGATGGACCATCGGCGGTGCACAAGTTATCATTGTCGgcgataatttttttgatggCCTACAAGTCGTATTCGGAACAATGCTCGTATGGAGTGAGCTGATAACATCACACGCGATTCGAGTACAAACACCACCCAGACATATTCCGGGTGTCGTTGATGTCACTCTATCCTACAAAAGTAAGCAGTTCTGTAAGGGACAACCCGGCCGattcgtgtatgtgtCTTTAAGCGAACCAACACTTGACTACAATTTCCAACGATTACAAAAGTCCGTACCGCGGCATCCAGGCGATCCCGACAAGCTACCAAAGGAGATTCTACTTAAACGTGCTGCCGACATTGCTGAAGCTCTCTATTCGATGCCACGGTCACCAAATAGTTCGAGCACATTCAATTCGTATGCCGGCCAATTGGCGGTGAGTGTTCAAGACAGTAATGCACAGTGGACTGAAGATGATTATCAACGAACACAAACGAGTAGTGTGAGCCCGCGTGGTGGCTATTGCAGTAGTGCATCAACGCCACATTCATCCGGAGGCGGTTCATATGGTGCTGGCAATGGAAATGGATATGCACCAAATATGGGCACCTTATCAGCGTCCTCATCGAGTGTGTTCAATTCGACATCGACTAGTGCCTTTGCACCATTAGTAACCACATCATCAGCTTGGCATCAAGCTTTAGTCCCTGTTCACACATCTACACACCAAACCTGGCATAATCCTTCTGCTACAACAGCAGCCGCTGTTTAA
- Protein Sequence
- MRRFQVVIATQVSVEGPLMAISDQMFVHNNSKHGRRAKRLDASDGTSPLSISHPLAPDSTYDGLYPPMPVATPCIKAISPTEGWTIGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVDVTLSYKSKQFCKGQPGRFVYVSLSEPTLDYNFQRLQKSVPRHPGDPDKLPKEILLKRAADIAEALYSMPRSPNSSSTFNSYAGQLAVSVQDSNAQWTEDDYQRTQTSSVSPRGGYCSSASTPHSSGGGSYGAGNGNGYAPNMGTLSASSSSVFNSTSTSAFAPLVTTSSAWHQALVPVHTSTHQTWHNPSATTAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00285204; iTF_00133015;
- 90% Identity
- iTF_00285204; iTF_00133015;
- 80% Identity
- -