Smos014974.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sitodiplosis mosellana
Gene Symbol
jarid2b
Assembly
GCA_009176505.1
Location
VUAH01006166.1:462636-470959[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-22 5.6e-19 68.4 0.0 7 89 1444 1524 1440 1524 0.93

Sequence Information

Coding Sequence
ATGGTGATCTCAAAGGTGGGGAAGCGCAAACGGAATCCACCGCCGGTTAAAGAAACACGTCCTGTACAGGAACAGCCCAAAAGaCCAAAAGTGCAGGCTCAACGTAAATTTGCCCAAGTATGCGGTGGAAGTGCATCATCAACGCTACCCTCTAGCTTGCTTGCAAGCCAATCGACGACACAGAATGGAAGTGTAAAAACAGATGGAATAAATCATGATCCGCCACAAGAACTGCTACCGAACAGACGGCCAAATACAGAGGACTTCCTaacatttctttgttttcgcGGAACATCGGTTCTTCCATCAcatttagatttttttaatacaaataaaaattcggaTCCGAGACAAGCGAAGCCGAAGACAGAAGCGATGGCGCCTAGCTGTAGCTCAAAAGAAGTTAAGCAAGAGGATAAGCGGTCTGAGATCAAGAATGAAAAGAGCGATGTTGTAAAAGATGCGAAAAAAGACGACGATCCACCGAAATTTATTCCGTTTGCCGTACGGAAACGGGCTGATACTGTTGCCGCTGGATCGCGTAAACAAACCGTTCAagcattgaagaaaaagtatCAAGACCAACGAATTGCTAAAAATAAAGCACAATGTAAAACAAGGTCGTCCACGGCAAAAGAAGCTGAAATGAGTAAAATGcagaaatcgaaacaaaatgaagttGATGTGACCCCAAACGATAGCCCTGGAAAAGGCCGAAATAAGAGAAAACTTCGCGGAAATGTTGGAAATATTCAACCCGAAGAAGAACCGGTTATAGTGAAAGCGCCGAAAACAGCCAGAGATTCAATTACGCGGCCACAAAAAACTCTCCCAGCTGACACGACTAAAGGACAAAAAGTAGGAACTCGTACGACAAAATCAATCGGGTCCATTCCAGCTAAAagcgaagagaaagaaaaagaaaaagataaGGAGAAAGCGAAGgagaaggagaaagaaaaagaaacagaagagAGTACGAGAACAACGAGACAAAGGAGTTATTCGTTGCCTAAGCCGGAAGTGAAACCACCTAAAACTCCGGAAAAAAGTGCAAATCAAGCTGAGTCTGCAACTCCAAAAAGTGCAAAGAGCAAAAACGCCAAGAAAAATGCCAATGACACAGTTGAAGGAGATTTTTCATCCGACGACGATTTGCCATTGGTCGAGAAAAAGAAGGCTAAAGCGGCACGCCAAGAAAAGCCAAAACGGAATTTAAAGCGAATCTCCAATCGTCAGAACCAGTCCATTGAGTCGAATGAACGGGAGAGATCTGGTGACAGAAAGTCAGATGTAAGCTCATCAGAGCCGAAACGAAAAGTACTTGCCACAAATAGAAAATCGGCGCAGAACAAAAATACTTCCAATGCACAAAGCCACGCCAAGTCGACTGTTAGTGACAAATCAGAAAATGAATCGCAGCAAGAGAgcaaaaatgatgcaaaagttGTGAGTCGAAAGCGCCGTAATGAATTTACCGATCTTTCGCAAACCGATCAAAgtgagaatgaaacgaaaactgGCCGTCCGATGCGTAAAACTAAGGAAGCAGCCGCTATATACATGGAACTGATAggtcaaaaattaaatttgagcGATTTCGACGATGATTTGTCCGTTGATAGTTTTCCAGAATTGCCCAATGTCAAGAAAACTGAACAAATGGAGAACGAATTGAAGGCAAACTTGGGGAAAGAGAAGCGTGAACTCACATCAACACCCAAAAGAGGTCGACCGAAACGAGAAGATGCGAGTTTAGTGCCCGAAGAAAAACCCGAAACAactcaaaaatcgattgaaaatggccATAAGGAGGAAAAATCGAAGACAggggaaaagaagaaattagaaaaaagtTTCAGCGATTCGGATGATGAGCCATTGGCCAGTAAATTagaacgaaaatcaaaatctcCCAAAAACCAAAGGAAGTCCATTGCGATTCCGGtgggaaaaatcgatttgaaccAAGAAAATAGAACGGAGAATAAGCATGAAGCATCATTTAGAAGTGCTGACAATTCAGGCGAATGCAAACCTTTAGAAACGACAGCTAACAATACAACTATCGCTCTTAATTCTACTATGACAACACCAGCAAAACATAATACATCAACAACCACTGAACccacaacaaaaacgaaaaatacttCATCACCACCAAAAagcattgatttgaatgaaaccgAGTTTAAAATGCCGGCTGAAAGTGTGAAGCAACTTTTGAGCCCACCCATAAATGTGAGCCCGATCAAAATTCCAACCATTCGGCCAAAAACAGCTGCCTTCAACAAGGACCTTCTGCTGGCTTCATCGTCTGGAAAAAATACATCGCAAAGCATATCATCCATTTTAGCCGATTTAATGCCGAGCAAAGAGGAATCGggaaaaatatttggtatCGCTAGTGTAACATTAGCACAGAGCTCTGGTCCAATTGACACCAAGTGCACACTCGGAAAATGTGGTTCAATACACAAGCCATCACTGGGGCCAGGCGTTCCAACTGAGGCTTATTTAGGTGaccaaatgtcaaataaaGATCGACGAAAAGCCAAGGTCAACATGACTCAtgagcaaattgaaaaatggttgtCGGAATGTTCAATGACTGCCGATCCATTCGTTAATGATTCGCTCGACGACGAACTTGACTTGACAAGTTCGCCGAAACCAATCAATTATTTATCCACGCCATCACCGTTGCATACGCTACGCGATGGCGACAATTTCCGAGATGAAAGTTCATCTTCAACCAAATTCAGAACTCAAACGCCCAAAGAGGGTAAATTGACTCAAGTACAACAAACAACACCGGTGAAGGGCAAAATAAACTTATTTCCAAAAGGTGAATGTACCAAAACTTcgacagaaaaagaagataaGACTTTGGCAAATCAAACCAAGCCGATtgttgcaaaaaaagaagctcAGATTGTTTTAGAAAAGGCATCGGTTTCGAAAAAGCCGACTTCAACCAATCAAATCAAGAGCGCAGATGCGGACGAATCGAAGAATGAAAGCATCAAACCAATTTCAGTGGTGAAAGTACAGTCATCGCCAAATAAACCAAATGTGAGTGGTATACCAATAACGCCCGACAAGAAACCGATTTACAATCGAAGAACACCCGTTTATAATACCAAGAAAACGGATCAAGGCACTGTGAAAAGTCCCCCAGTTGTGAACACATTTGGTGCCTTCTCGCCCGAAAACGAAGCAAGTGTCTACTCTTTTGACAAAGAAGAAGATAACATGCCGGCATCAATTCCATTTCGTAGACATAGTAGAAGAGGTTCAACGCattcgaaaaataatgaaaatgatacaaCAATCAAGACGACAAATATTGCACAGATGGCTAAATCAAATCAACGGGATCAACCGGCGAAGAAACAACAGATATTTTTAGCCTTAGGCCCTGAAGACGGTAAAACGTCTGCCCCAATTCCAGTTCTAGCCAAGCCGAATGCCAAAGACAAAGACAAAGACAAAGACAAAGACAAAGACAAAGACAAAGGAATGAAATCGCTGGTGAATGAAAGTGAATTAGGAAAAGCAATTATGGCATCAGATAATGATGGAAAGGATTCTGATTCGGAAGGGCACACATTTTATATACCGCTACAATGTATGGCCAATACCGGTAATGCATCCGATCAGCTCATTCAAGGAGTGGCTGTTAAGCTTGGTACTGAAGGACCAGAAGGGCCGAATCAAAAGGTTATTATGCACGCCAAATTAGTGACCAAATCACAAATGAGCGCAAACACAGCTCCAATACCAGAAGGTATGGGCATGGCCAACATACACGAAATAGTTAAAAATTTGATAGCCAACAAAGAAGTGGTTGGTTCGAAATCCGTTCCAATCGGCACCATTCAGCCACAGTCCAAGTGCAATGACTCAACGAAACCAAGTACATCGGTGTTACCATCAGAGCCAGTATTATCTAACCAACCAACTACATCGAACTTAACACGGCACAATTCTAATCAATCATTATTCTCTCAAAAGACCAAAAGCACCAAACGCACTAAAAACGAGCAAACCATTCAACCGAGTAACAACACTGCATTTCCCCGATACGATGACCCGGCACAAATGGTCGAGGCGCCCGTATTTAAACCAACTGAAAGAGAATTTCAAGATCCAATCGAATTTATAAATCGTATCACTCCAATTGCCGCTCGTTTTGGTTTGTGTCGCATTATCCCACCGTCAACATTCAAACCCGAATGTAAAATAAGCGATGACATGAGATTCACGGCCTACAATCAGTACGTGCATAAAATGTTGCATCGATGGGGGCCGAGTGTCAAAGAGTTCagcgcaataaaaaaatacttgGCTACTCAATGCATAACGTTGAATCAGCCACCATTGATTGGAGGCATGGAAGTGGATTTGCCACGATTATACCACACGGTTCAAGAGTTGGGCGGTCTCAGAGAAGTCattgagaagaaaaagtgGGCGCGTGTGGCTGAAGAAATGTGCATACCCAAATCAGCTCAAGATCGTGTAACGAAACTCGATGACATATATTGCAAATATTTACTACCATATGATACACTTTCACCCAGTGAACggcagaaattgtttgaaagtGTTGAGGCCGATTGGGCAAAGAGCGAAGCGAAAGCTCGACGCAATGCGGACCGAAGTGCACTGAGTGAAAGTAACTCAAACGAAAATTCCGACGAAGAGCAATctgatgaagatgatgatgaatcgGGGGATAGTGGTTCGATGGAGTGTATTGTTAAGGGGAAAAGCATGGCCCTCAGTGCATTTTTCCGTGTTGCAAGGAACACTATGGCGCTTTGGTTCCGGAACACTGAACCAATCACAAGTGAAGTCGAAGCGGAGTTTTGGCGACACGTTGCAGTTCGCGATAGTCACGTATGCGTTCACTCAGGCTCCATTGATTCAAGCGGATGGGGATATGGTTTCCCTTCACCGGGCCCAAAGACTAAAAACTCTACGTGCAGCAAACATCCATGGAATTTGAAAGTTCTCACAAACAATCACAATTCGATTTTGAGATCGATTGGTCCAATTACAGGAGTTACCGTGCCCACGCTGCATGTTGGAATGCTTTTCAGTGCTTGTTGCTGGTATCGTGATCCCCACGGTTTGCCTTGGATCGAATACTTGCATACAGGTGGCAGTAAAATTTGGTACAGTGTACCAAATGAGCAAAGCACCAATTTCCGTACAGCATTTACATCGCTTGTACCAACCCATTGTCAGAATAAAACGGTTTGGCTACCATGCGACACAGCAATGGTACCGCCACACATGTTGACTGATCGCGGGGTTTCACTGTGTCGAACCGAACAAGAACCAGGACAGTTTGTTGTAGTTTTCCCACGTGCCTACACCTCCAACATATGCACCGGCTACTCCATTTCGGAGAGCGTCTACTTTGCCCCGATGTCGTGGTTGGAAACAGCCAAAGAAGATTTCAAGGATATTCACGAAAGTTGTGAACCAGCCATGTTCTCTTTGGAACAGCTTCTCTTTTCTGTTGCATCAGATGTTCGAACCAATGTTGATATATTGGAAACTGTACTTCCAATGCTAAAGGAGGTGTACGATCGTGAGATTAAAGAAAGAGCTGAAATTCAGGCATGCGGTGTTAATCGTACGGAAAAAATCGTGCTCAAACCAAAAAAGccacaaacagaagaaaatgaatgtgatatCTGTCGTGCAAATGTGTATATTTCATGGATTAAATGCGATGATGACAGTATTTACTGTTTACAGCATGCcgttaaatatttgaaaaattgtcgaaTACAAGCTAAGCAGTGCAAGTTACTATTTATGTATAGAAAAGAGGAAATTGACGAATTGATTAGtaaagtgaatgaaaagataacgcaacagaagaaaaagaatgaaagcaaaaaatga
Protein Sequence
MVISKVGKRKRNPPPVKETRPVQEQPKRPKVQAQRKFAQVCGGSASSTLPSSLLASQSTTQNGSVKTDGINHDPPQELLPNRRPNTEDFLTFLCFRGTSVLPSHLDFFNTNKNSDPRQAKPKTEAMAPSCSSKEVKQEDKRSEIKNEKSDVVKDAKKDDDPPKFIPFAVRKRADTVAAGSRKQTVQALKKKYQDQRIAKNKAQCKTRSSTAKEAEMSKMQKSKQNEVDVTPNDSPGKGRNKRKLRGNVGNIQPEEEPVIVKAPKTARDSITRPQKTLPADTTKGQKVGTRTTKSIGSIPAKSEEKEKEKDKEKAKEKEKEKETEESTRTTRQRSYSLPKPEVKPPKTPEKSANQAESATPKSAKSKNAKKNANDTVEGDFSSDDDLPLVEKKKAKAARQEKPKRNLKRISNRQNQSIESNERERSGDRKSDVSSSEPKRKVLATNRKSAQNKNTSNAQSHAKSTVSDKSENESQQESKNDAKVVSRKRRNEFTDLSQTDQSENETKTGRPMRKTKEAAAIYMELIGQKLNLSDFDDDLSVDSFPELPNVKKTEQMENELKANLGKEKRELTSTPKRGRPKREDASLVPEEKPETTQKSIENGHKEEKSKTGEKKKLEKSFSDSDDEPLASKLERKSKSPKNQRKSIAIPVGKIDLNQENRTENKHEASFRSADNSGECKPLETTANNTTIALNSTMTTPAKHNTSTTTEPTTKTKNTSSPPKSIDLNETEFKMPAESVKQLLSPPINVSPIKIPTIRPKTAAFNKDLLLASSSGKNTSQSISSILADLMPSKEESGKIFGIASVTLAQSSGPIDTKCTLGKCGSIHKPSLGPGVPTEAYLGDQMSNKDRRKAKVNMTHEQIEKWLSECSMTADPFVNDSLDDELDLTSSPKPINYLSTPSPLHTLRDGDNFRDESSSSTKFRTQTPKEGKLTQVQQTTPVKGKINLFPKGECTKTSTEKEDKTLANQTKPIVAKKEAQIVLEKASVSKKPTSTNQIKSADADESKNESIKPISVVKVQSSPNKPNVSGIPITPDKKPIYNRRTPVYNTKKTDQGTVKSPPVVNTFGAFSPENEASVYSFDKEEDNMPASIPFRRHSRRGSTHSKNNENDTTIKTTNIAQMAKSNQRDQPAKKQQIFLALGPEDGKTSAPIPVLAKPNAKDKDKDKDKDKDKDKGMKSLVNESELGKAIMASDNDGKDSDSEGHTFYIPLQCMANTGNASDQLIQGVAVKLGTEGPEGPNQKVIMHAKLVTKSQMSANTAPIPEGMGMANIHEIVKNLIANKEVVGSKSVPIGTIQPQSKCNDSTKPSTSVLPSEPVLSNQPTTSNLTRHNSNQSLFSQKTKSTKRTKNEQTIQPSNNTAFPRYDDPAQMVEAPVFKPTEREFQDPIEFINRITPIAARFGLCRIIPPSTFKPECKISDDMRFTAYNQYVHKMLHRWGPSVKEFSAIKKYLATQCITLNQPPLIGGMEVDLPRLYHTVQELGGLREVIEKKKWARVAEEMCIPKSAQDRVTKLDDIYCKYLLPYDTLSPSERQKLFESVEADWAKSEAKARRNADRSALSESNSNENSDEEQSDEDDDESGDSGSMECIVKGKSMALSAFFRVARNTMALWFRNTEPITSEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKTKNSTCSKHPWNLKVLTNNHNSILRSIGPITGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGGSKIWYSVPNEQSTNFRTAFTSLVPTHCQNKTVWLPCDTAMVPPHMLTDRGVSLCRTEQEPGQFVVVFPRAYTSNICTGYSISESVYFAPMSWLETAKEDFKDIHESCEPAMFSLEQLLFSVASDVRTNVDILETVLPMLKEVYDREIKERAEIQACGVNRTEKIVLKPKKPQTEENECDICRANVYISWIKCDDDSIYCLQHAVKYLKNCRIQAKQCKLLFMYRKEEIDELISKVNEKITQQKKKNESKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00367008;
90% Identity
-
80% Identity
-