Smos011953.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- ARID4B
- Assembly
- GCA_009176505.1
- Location
- VUAH01006180.1:392783-400126[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-29 5.4e-26 90.9 0.1 1 89 309 395 309 395 0.96
Sequence Information
- Coding Sequence
- ATGCAGCAAGTCGATGATCCTCCCTATCTGACGGTGGGCACGGAGGTAAGCGCCAAATACAAGGGTGCTTTTTGCGAAGCGAAGGTGCGTAAAGTGGTTcgcaatatcaaatgcaagGTTGCTTATAAACAAGGTCTTGGCTCCGGTACGGTGTCCGATGACCAAATCAAATGTGACCTTTTGCGTGTCGGTGCAACGGTCGAAGTGAAACACCCGGATCGACGAGAGACGGTCGAAGCAACCATAACAAAAATTCAAGATTACTCACAATATACCGTCGTGTTTGACGATGGTGACATTACAACATTACGACGCAGTGCATTGTGTCTGAAGAGCGGACGACATTTTAACGAAAGCGAAACGTTGGATCAGCTACCGTTGACACATCCCGAACATTTTGGGAATCCAGTGATTGGTGGACGCCGCGGCAGAAGCTTGGAGTTGTACAAAAAGAGTGTTGCTCGATCACGACAAGGTCAAACACCAGATGAAAGTTCCGAAGAGGACGAAGAGCCAGAAGCAGTGAAGCCACGAATCGTCGAAAAAGAAGAGCACATTGGCAAGATTGTCTGCGTTGAAAGTACAGACACCAAGAAAAAAGGGCCAAAAGAAAACTGGTTCCCAGCTTTGGTTGTAGCACCAACGGCACAAGACACTGTGAGAATTCGTGTGAAAGAGGAATATTTGGTGAGATCATTCAAAGACGGCCGTTATTACACCGTTCCTAAGAAAGAGGCCACTGAGTTCACACGTGAACAAGCAACGAAACAAGATACGGCGGCCGTACAGGCAGCGTTAGAATATTTGCATAGTGATTGTCTGCCTGCGCATTGGGATCGCGAGGTATTGTTTGGCTTGGGCAATTCATCGAGCGATTTTTACAATGAATTCGATTCTGACACGTCGGACGATGAGCCCACTGAAGAGAAAGACCATTTCGTAGCACAACTCTACAAGTACATGGATGATCGCGGAACACCGTTGAACAAAGGTCCAAGTATCATCAATAAGGATGTCGATTTATACCGGCTTTATCGAGCTGTTCAAAAGCTCGGCGGTTACAATCGCGTTACATCGCAAAATCAATGGAAACAAATTGCGATTCGGCTGGGCTTTGTTCCGACAACCACGAGCATTCAGAATCTCGTAAAACAAGCCTACAAAAAATTCCTATTGCCATTCGAAGAGTTCGATCGAAAATTGGGCTGTTCGTTGGTCGCACACCCACGAGCCAATCGCATCAAAGGTCGAAGTTTGTTGCGAGCCAATTCAGTCGCTTCACCGAAACCGGAAAAAGAGGCCAAATCCACCACATCAGCGGCTGAAGAGTCGGAGAATACAAGTGAATCAAGTATtgacacaaaaccaaaaactaaAACCGGTAAAGTGAAATCATTGGTTGATCGATACGAAGAGAAAGTGGATGAAAGTCGACGCGAATCGAAGGAAAATCCAaaggaaaaggaaaaagaaaaggaaaaggaCAAAGAAAAGGAGACGAAGAAAGAGAGTGGGAAACGAGATAAGGAGAAGGACAAGGACAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGACAAGGAGAAGGAGAAGGAGAAGGACAAGGACAAGGATACGGCATCAAGTTCCAAGATTGATGTGCCAGTGACGCCATCAagtaaaaaagagaaatcgaacaaaaaaccaGTCACACCGCAGGTTGATGAAAGGAAAAGCCGAAAGAAGGGCAAAGACGTCGAAAGCAATGAAAAGATTAAAGTCGAAACCGACGAAAAAGACAAGGTCGATCAAAGCAATGTGCAACCAATCAATGTTGGTGATAAATTGCGAGTTTATTATCATGAACAAAAAGTCACGTACGAAGcaaaagtaattgaaatttccaaacaaaatgacaatttgTTGTACCTCGTACATTACACCGGGTGGAATACAAGGTATGACGAATGGGTGCCGAAGGAGCGGATTGCCGAAAATTTAACGAACAGTAAAACGAGCAAGCGTGCAAAAGCTGGTGTTAAAAATGAAACTCGTTCAAATAGTTCGACGTCAGAGAAATTGCCAGGTCCATCGCCAGTGATTCGTTCATCGAGTAAACGAAATCGCGTCAGTTCAAGGGGTGATTCACAACCGCCTCGTTCTACAACCCCATCATCGATTGCCTCGAATTCAAGTCGAACAAAATCTCCGGCAACACCAGCTCAACAGCGTCGCACAACTCGTGGTCAACCGGGTAAATTGCGACGAACATCCAACAACACCGACATATCATCGCTGCAAACCGACTCAGACAGTGATTCCGATGAGCCAGTCGTGAAAAAACCAACGCCAAAACGGAAATCAGGCGCGGTTAAAGCGAAAGTCAAACGTGAGGCTGCTATCGAAGcggttgaaataaaaaaagaaaaagactCGAATCCAAGTTCGGAAGAGGAGACATTGGCCAGTGCGGTTGCGAAGAGACGTGgtgaaatcgatttgaatcaaatgcGTTCCGAACTCAAAGGCTTCAATGACATTGATAAACCATCGACTGATGCCGGCGTTTCAAGTTCAACGACGATGgttgaaaagaaatttgatTACATCCCAAAAGTGGAACCGACCGAAGCGGATatcacaacaacagcaacaacatcaagcACGACCGTTAGCACCAGCACTGGTATCACAGCTCGAACGAAAGCATCACCTGTCAATTCATCCGATACGAATGATTCGTCTGGCGACGAAGATTCACAATTCTCCGATAAAACGACTACACTTGAGAATGTGTcagataaattgaataaattcattttcgataaaaatgcgTCGGGCAGTAAACATGATATGGTAGCAACATTGAAACAGTCAGGCATCGAGAAAATCATCAAAAGCACACTGGCAGAGAAACCAAAAGCATTGCCCGATAAACCAACGATGAAAACACTCGTCGAACACACACCATTAAAGGAGGTCGACAAAAAGGTCGAAAGTGATGCAACGACCGATAGGGAATCGAAACCATCGGCAGCGTCCGAACAAAAGCACACAACAACACACGATAAAGAAGCGGCCAAAGAGACAAAGACAAAAGGAGCTGTGGTTGAGCCTGGTTCAGAACAAGTGAGTGGTGTGACGGTGAAAATTGAGGCAGATAAATCAATTTTAGCAGAGAAACCGGATCAAGAATCGGATCTTACTAAAACGAAGCTACCTGATGCGGAGAGCAAAACGGATACTCCATCACAAACGCCAACGACATCAACACAATCTTCCACCAGTCAAGAGCAACTGACATTGGACCCGAAACTCAACACCGATGTTACGTTAAAGGTTGAAGCTGGCGAAAAGCCAACGCCGAAACAAATCTTTGCCGAAAAACCTAAATCATTCAACAAGACAATGATACGGCAACCGCTGGCATCTCCTAAAGACGAACCGAAATCGAGTGGTGATTCCGATGCAGTGGCCAGTGGCAGTGCATCAACTTGTGATATTTATGAGTTTAAAGAACCAGAACTGTTCGAATTCGAAACATCAAAGAAACTATCGCCAGAAGTGGACAAAAAGGCAAAGCGAAAAGCACAAATTGATACAGCGAAACCATCCGcattatcatcatcgtcgtcctTATCACCAACGTCAACGGCCATGCCagcaaaacgaacaaaaaaaccgaGTAAAGAGCCGGAAAAACCGACCAAAGAGAGTGACGACCGAAAATCACCAAAATCATTGCTAACCACCGGTTCTGTGTTTTCGGTGCGTGTTGATTCGATATTCGATTCGTTGCGCAAATCACCATGCTATATGCCAGATCAAGTCGATGAAGCCATGATGATGAGTGAGGATTGCCCATCAACATCCGAAGCAATACCAGTACAACAATTGCAATCTGAGATGAAGCCATTGtttatcaattcatttgtcGATGCAACGCCGGCAGATACAtcgaaaatattcgatttgaaaagtgGCCCCAGTGATTTTAAAGAGGATCTGGAAAATGATTTGGAATcagcaaaaaaattcattctgaGCGATGAAGTGTTGAATCAAGAGCCGCCAAAAATTGACAAGCCATCATCAATTGCCGATAAAGTGTTGAAAGCGCTTCATTCAGCACAGCAAATGCCTGGTACATCTGCAGCAGCTGGCTCTGAAACTTCGTCGATCGAAatatcaacagcagcagcagcagcaaaagaCACGGAATCAGAGAGCACAAAACCAATTACGGTTGATGTCAAACCAAAGGTGTTATCCTTTGACAAATCGGTTACACCATCCACATCGACATGTGGCGTTAGTGATTCAGCGACGACATCGGCACGAGCTacttcatcatcttcatcatcatcatcagcatcatcaacaacatcatcatcatatcgGGCTGGCATCTCGCCAACCACCGAATCAGCAACCATTAAGCCAGTTCTCAATAAGATTGATATTCTGGAATCAATATCACCGAAAAATAACGATCTCAGTGAAACGATCCAGAAATTGGAATCAGCCATTCAGAAATCGGGTGAGCACACTCACATGTCCGAAGATACATCGGACAGCACGGACTCAGAGCAACGACTTGTTATCGAAGATGAATCTCAAAGTTCGGAAACGCCGAATGAATTCGTTTTGAGCAAGCAGGAAAGTGATCAATCATATGGCGGTAAGCAAATtggcaaagaaaaagagaaaccaTCAACGGTGGCTGCTCCAGTGGTTCTTGATAAGAAACTGCATGATTTCgatgagaaagagagtgcTGAAAAATCAACGCCAACAATATCAACGGCCACGACAGCACCGGTGTCGAATATCACACCAAGTGTCACAAATACTACCGCAAGTCCAGATTCAAAGGCTCAGGACGAGCCAAGTAGCAGGGATCAAATGGCAACAGCAGTGAAAACCGAAGAATCTGCCGATAAAGTTAAGATTGAGGATGAACTTGCCGCTGAGAATgctcaaaatgaatcaatatcgttgttgttgtgcgaAGAAACCATTCCGGGTAGCCCAGCACCAGCCTGTCCAAAGGAACAATGCGATTTAATCAAAAAGAATTATGATAGTATATTCACTAGTCCATCGACAGTAGCTGAGGTTGATGCCAAGCCAATTCCCACCGAAACCAGCACCAGTAGCACCACCACCGCTGTCGCTGATGGCAAACACAATAAGAGTAAAAATGCTACGCCTCGCAGTTCTCCCAGAGATTCAATGAGTCAGGAAGATAGTAGCGaagagaacaacaaaaaaccagAACCTGATCGCATTGGATCAGCCAAAAAGCGACGTTGCACTCGTAAGCAATCTGAAGCAGAAGTAGCATCAAAACGACGAAAAACGGCTGCGAGAAGGAACACCCAAACTGgCTCCGAAAGTGAAGATAACTCAGATGCAATAACTCCACATAAGCTACAACGACCATCAAAACATTATCAATACAATTTTCTTGTTCAGCTTGATCCGGCTATGAATAGCAGTCAGCGAATCACTTTGCTCAAGAAGAAGATTCAAGATTTGCGCAAAACCTACAACATGATCAAAACTGAGTTGGCAAGCATTGATCGGCGGCGGAAAAAGTTGCGGCGTCGCGAGcgagaaatgaagaaaaatgtccAGAAGCAGttacaacagcagcaacagcaacaacagcagcagcaacagcagcaaaatcAGCCAATACAAGTCGATGAAAATCACCCATCAATAATATAA
- Protein Sequence
- MQQVDDPPYLTVGTEVSAKYKGAFCEAKVRKVVRNIKCKVAYKQGLGSGTVSDDQIKCDLLRVGATVEVKHPDRRETVEATITKIQDYSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFGNPVIGGRRGRSLELYKKSVARSRQGQTPDESSEEDEEPEAVKPRIVEKEEHIGKIVCVESTDTKKKGPKENWFPALVVAPTAQDTVRIRVKEEYLVRSFKDGRYYTVPKKEATEFTREQATKQDTAAVQAALEYLHSDCLPAHWDREVLFGLGNSSSDFYNEFDSDTSDDEPTEEKDHFVAQLYKYMDDRGTPLNKGPSIINKDVDLYRLYRAVQKLGGYNRVTSQNQWKQIAIRLGFVPTTTSIQNLVKQAYKKFLLPFEEFDRKLGCSLVAHPRANRIKGRSLLRANSVASPKPEKEAKSTTSAAEESENTSESSIDTKPKTKTGKVKSLVDRYEEKVDESRRESKENPKEKEKEKEKDKEKETKKESGKRDKEKDKDKEKEKEKEKEKEKDKEKEKEKDKDKDTASSSKIDVPVTPSSKKEKSNKKPVTPQVDERKSRKKGKDVESNEKIKVETDEKDKVDQSNVQPINVGDKLRVYYHEQKVTYEAKVIEISKQNDNLLYLVHYTGWNTRYDEWVPKERIAENLTNSKTSKRAKAGVKNETRSNSSTSEKLPGPSPVIRSSSKRNRVSSRGDSQPPRSTTPSSIASNSSRTKSPATPAQQRRTTRGQPGKLRRTSNNTDISSLQTDSDSDSDEPVVKKPTPKRKSGAVKAKVKREAAIEAVEIKKEKDSNPSSEEETLASAVAKRRGEIDLNQMRSELKGFNDIDKPSTDAGVSSSTTMVEKKFDYIPKVEPTEADITTTATTSSTTVSTSTGITARTKASPVNSSDTNDSSGDEDSQFSDKTTTLENVSDKLNKFIFDKNASGSKHDMVATLKQSGIEKIIKSTLAEKPKALPDKPTMKTLVEHTPLKEVDKKVESDATTDRESKPSAASEQKHTTTHDKEAAKETKTKGAVVEPGSEQVSGVTVKIEADKSILAEKPDQESDLTKTKLPDAESKTDTPSQTPTTSTQSSTSQEQLTLDPKLNTDVTLKVEAGEKPTPKQIFAEKPKSFNKTMIRQPLASPKDEPKSSGDSDAVASGSASTCDIYEFKEPELFEFETSKKLSPEVDKKAKRKAQIDTAKPSALSSSSSLSPTSTAMPAKRTKKPSKEPEKPTKESDDRKSPKSLLTTGSVFSVRVDSIFDSLRKSPCYMPDQVDEAMMMSEDCPSTSEAIPVQQLQSEMKPLFINSFVDATPADTSKIFDLKSGPSDFKEDLENDLESAKKFILSDEVLNQEPPKIDKPSSIADKVLKALHSAQQMPGTSAAAGSETSSIEISTAAAAAKDTESESTKPITVDVKPKVLSFDKSVTPSTSTCGVSDSATTSARATSSSSSSSSASSTTSSSYRAGISPTTESATIKPVLNKIDILESISPKNNDLSETIQKLESAIQKSGEHTHMSEDTSDSTDSEQRLVIEDESQSSETPNEFVLSKQESDQSYGGKQIGKEKEKPSTVAAPVVLDKKLHDFDEKESAEKSTPTISTATTAPVSNITPSVTNTTASPDSKAQDEPSSRDQMATAVKTEESADKVKIEDELAAENAQNESISLLLCEETIPGSPAPACPKEQCDLIKKNYDSIFTSPSTVAEVDAKPIPTETSTSSTTTAVADGKHNKSKNATPRSSPRDSMSQEDSSEENNKKPEPDRIGSAKKRRCTRKQSEAEVASKRRKTAARRNTQTGSESEDNSDAITPHKLQRPSKHYQYNFLVQLDPAMNSSQRITLLKKKIQDLRKTYNMIKTELASIDRRRKKLRRREREMKKNVQKQLQQQQQQQQQQQQQQNQPIQVDENHPSII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -