Smos009492.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- Ubp1
- Assembly
- GCA_009176505.1
- Location
- VUAH01006161.1:792252-818075[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-66 1.1e-62 211.4 1.2 13 221 307 529 294 531 0.90
Sequence Information
- Coding Sequence
- ATGGCGATATCGGTTGCAAAGCAATACTGCCCGGATTTCAACAGCCTGATTGATCCTCTGCGCACGCTGCAGAGCTTTGACTACTTTGGTTCACACACGGATCAGATGGAATTTACCATTACCACTGACTCGGATGAGATAATCAATCGAAACAACTTCCACACAGCCCAGAATCAAGATTTACAAGGTATTGATTTTAACGAATCACCAGAACATTCACCAACGTCGTGGCCAGCCGATTATCAAAAACTCATGCACGGATCAACCATTGACGTGAATCAAATGCAGCCGCAAGGTAAAAAGCGCCGAATGGATTGGGATGCATTGGATCTGAATGAGAATGGAAGCGGTAGCAGTGGTATTGGAGTTGTTGAATCGAAGATGCCAAATCTAGTGGCTAATGGGAAAGAATGCGAACGTAATCGCAAAAATGTCAACGGAGCTCGGCTCGGTTGGACGGAcgatattgattttgattacaATGGCGATTTAACCAACAATTCATATTTGAATAATGATTCTTTCTTATCATTATCATCGGCTTTGACTGTGTTAAAGCAGGAGATACCATCACCGTTTGGCAATGATCATGGCAAAAAGATTGTTAAGGGATCGCCGATGAGCAAGGAGCAAGTGGACGAAATCTCTCAAATTGAGCAGGTAGCAAATGGTGGTAAAAATGgtaacaacaacaccaccgcaaataacaacaataccACCAACGGAACGgtcaatagcaacaacaacaacacgaacGCCGTTGGCGGTGCCAACAATGCCAACAACATGGCATGCCATTTGAATGGTAACAGCAATAGCAGTGCATCCAACGATCTAGTCAACTGTTTGGATAGCGTTGGCCAAAATCAATCGTCACCAAATGATCCAAATGACGAGCGCAACGATTCGAACAACCTGAAAGCAATCAACGGTCAAACAAAGGAGGAAAAATCCTCTGAAGAATCCAAATTTCAATATGTGTTGGCTGCAGCTACATCGATTGcaacgaaaaacaacgaaGAGACCATCACATATTTGAATCAAGGTCAGAGCTACGAGATCAAGCTCAAGAAATTGGGTGATTTAACTGCTTATCGTGGGAAAATTTTGAAGAGTGTGatcaaaatatgttttcacGAGCGTCGCCTTCAGTACATGGAACGTGAACAGATGCATTTGTGGCAAGCATCGCGTCCGGGTGAGCGTATCATTGAAATCGATGTACCGTTATCGTATGGTTTGTGTCATGTTACACAGCCGCACAATTCCAGTCTCTTGAATGTGGTGGAAGTGTTGTGGGATCCGATGAAAGAGGTCGGTGTttacatcaaaatcaattgcatttcaacGGAATTCACACCGAAAAAGCATGGCGGCGAAAAAGGTGTACCGTTTCgtattcaaatcgaaaccTATTTGGAGAATACGATGAATGGTAATGGAAACggtataaataataatatcacTGGTGCCATCGCTGATAATACGAAGGCAATCCATGCTGCTGCCTGTCAGATTAAGGTGTTTAAATTGAAGGGAGCCGATCGCAAGCACAAACAGGATCGAGAAAAGATTCAAAAGCGGCCAGCTGCCGAAAAGGAGAAATACCAACCGAGCTACGAATGCACCATCCTCAATGACATCCCAAATGATCTTGTGAATGCCAATACCTACAGCCCGGAAcaTATTCGAGGATCTAGCTCGCCATTGATGTCAAACTCACCGATCCACATGACCAAATTCGATGGTCTATTCTCGACTGGCAATAGCAATGGCGGAACTGGCAATCCGATTGGCATCAACAGCGTTTCGTCGACCAATTCAAATGTTAAAATTATggatcaaaatattttgtcgCCATCAACACCACAACAAGCCATCATCGATAGCGACGAATACAACAGCTCAAGTGGTGGTTTCATTTCAACACCGTTGAACATTTCCAAAGATGCAACGCCATTAATTCTGGCTCAATGGCTAAACATGCATCGTCTTGGCCAATACGTTTCAACATTCGCCCAATTCTCCGGCGCCGATCTATTTCGCATGTCCAAAGAGGATTTGGTGCAGATTTGCGGATTGGCCGATGGCATTCGTCTATACAATACACTTCATTCGAAAGCAATCGCACCACGTCTCACGATCTACGTGAGTTCTGATGGCAGCTCATATCATGCCATTTATCTGCATGCAAACACGGCTAAGGAGCTCATTCAAAAGATTGTCAAATTGCCTGGATTCTCCGATTGTTTGGCAAATGCATCGgcaaatgtggaaaacaatCTCTTCTCGGGATGGAATTTGCAATCGAAATATTCGGGAAGCGCATCGAATTTGTGTGATTCAACGAAGTTCAGTGTATACATAAATGGGCCGGCTGGCATTCACGTTTTTGTGACGGATGAGGTATTGAGTAACATCAAAGATGAGAGCCTCTTCACGTTGGACGTGCAAAATAATAAAGTAATCATGAAGATTGtctacaaaaatgaaatttaa
- Protein Sequence
- MAISVAKQYCPDFNSLIDPLRTLQSFDYFGSHTDQMEFTITTDSDEIINRNNFHTAQNQDLQGIDFNESPEHSPTSWPADYQKLMHGSTIDVNQMQPQGKKRRMDWDALDLNENGSGSSGIGVVESKMPNLVANGKECERNRKNVNGARLGWTDDIDFDYNGDLTNNSYLNNDSFLSLSSALTVLKQEIPSPFGNDHGKKIVKGSPMSKEQVDEISQIEQVANGGKNGNNNTTANNNNTTNGTVNSNNNNTNAVGGANNANNMACHLNGNSNSSASNDLVNCLDSVGQNQSSPNDPNDERNDSNNLKAINGQTKEEKSSEESKFQYVLAAATSIATKNNEETITYLNQGQSYEIKLKKLGDLTAYRGKILKSVIKICFHERRLQYMEREQMHLWQASRPGERIIEIDVPLSYGLCHVTQPHNSSLLNVVEVLWDPMKEVGVYIKINCISTEFTPKKHGGEKGVPFRIQIETYLENTMNGNGNGINNNITGAIADNTKAIHAAACQIKVFKLKGADRKHKQDREKIQKRPAAEKEKYQPSYECTILNDIPNDLVNANTYSPEHIRGSSSPLMSNSPIHMTKFDGLFSTGNSNGGTGNPIGINSVSSTNSNVKIMDQNILSPSTPQQAIIDSDEYNSSSGGFISTPLNISKDATPLILAQWLNMHRLGQYVSTFAQFSGADLFRMSKEDLVQICGLADGIRLYNTLHSKAIAPRLTIYVSSDGSSYHAIYLHANTAKELIQKIVKLPGFSDCLANASANVENNLFSGWNLQSKYSGSASNLCDSTKFSVYINGPAGIHVFVTDEVLSNIKDESLFTLDVQNNKVIMKIVYKNEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01287867; iTF_00132990;
- 90% Identity
- -
- 80% Identity
- -