Smos013923.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- cnc
- Assembly
- GCA_009176505.1
- Location
- VUAH01006225.1:1356382-1444302[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-15 3.2e-12 46.4 11.0 3 63 794 854 792 856 0.91
Sequence Information
- Coding Sequence
- atgatggaAATTGACTTGCCGCGTATGCAATCGTTGTCACCACAATTCGATTCGCCATCAATGGACGCAATGCCTGGTATAACAAATCTAACAGATGTATCGTCATCTACAGAACCAGAACCACAACCGCAGCCACAACCATCCAGTTGTTCGATGAAAATAGCGAACAACTGCGACTGGAAATTCGATTCGGAAATCTGTGGATGCAAATACACGAATAAATCCGGTTGCGGGTGCAAATACATCAACAAAGAGAGCGAAATTGTTGAAGTACTATGGAAACAGGACGTTGATTTGGGTTACACTTTAGCGCCAGTTAAGTCAAGTTCACCCAAGGAATCGGCTACCGTTTCTGGACCATCGTTCAGCACCGaagacaatgaaaaattaaaagcacTTCAAGAACTCAAAAATGACAAgCCAAAACAGGATGAGGCCAAATCGCCTTTGGACGATGAATGGGCTGGCATTAATTTTACCGTCGACAATGAAACTGGTGAATACATCCAATTACCATTACAATTGGAAGAAATTTTGCAGGATGTTTTACAATTGGCCGATCTTGCGAATGAAAACGATCAAGTTGATGAAATTTTAGCCGAAGAACTGAAAAAGAGTGAATATTCGGACGTAAACGGTGAATCGAGTAGTGCGGCCACTGCCAGTACATCGAATCAATTTGATACGAATTTTGCGTTTCCAACGGACAAAGTGCCAACACAAGACCAACAAAAAGACAATAAAGCAACGAATCAAAGTGAAATTCACAGCAGTGAATTGCCACTTTTGCTAGATCCTCCGTTGACCGAGGAAGAAATTTCCGCTGATTTAAGCGCAATAATTAATGAGGCAAGCGATTTAGACGAATTGGATATGATGATTCAATCAGCTGGTCCGTTTCAACATCCACGTTCGGTGGCTCAAAACTATGGCCATGCCAACGCCAATATGTACCATCGACAGCCGTCTTATCATTCGCATCACCATCATCAGTCGCGATTGTCCCTTAGCCGAGCTTCAATGGAGCAACGTGGTTTAGATATTGCCAGTTTGTTCAGCCCATTGCCCGGAATGGGCGTCGGTATGAATGTCACTGATATGGGCTCCTATACACACTATCCACCACACTATTCTTATCAGGGTGCCAGTTCGATGCCTCAGCATGATCAGTATGGTGCTCATCAACATATGGCATTGCACAATGTATCGACTGGTGATATGGGAGCAAATCAATCGATTCCCACAATTGCACCATTGCCATCGCAACGGTCACACTATGCCACACCAAATTTGGGATCGGCCGTGTCATCGAGCATGCATCTTACCAATTCCAGTCATGATAGCGATGTTCTCGGTGCTACAAGCAACTATAAAACCGAACACGAAATGATGTACTATTCGAATGCATCATCTGAATTGAATCACACCACAGACAATTTTATCGCTTCCATAATGAATTATGATGACGACTTGCTTATGGATATCAGCACTAACGTCAACGATGGTTTTTACACAATGCGTATGCTGGAACCAAATGCCACCAACAACAATTCAGCCGTGCTAAGTGCACAGGCCGCACAAGCAGCAGGTAGCCTAAATAGTAATGGCGCTGGATTGTTGCCAAATGCGGCTGGAGCCCCACAAATGCAGACCACATTGAACGGCAACACTGCAACCACTGATCGTTTGGATGCATCCAGCGACAGTGCCGTCAGTTCGATGGGCTCGGAACGAGTACCATCATTGTCAGATGGCGAATGGGGTGACACTGGTAGCGATTCCGCTCAAGAATACCATAGTAAATATGGCCCATACGATTATAGCAGCTACAACGGCCGCTTGGGTGATGCCGTTCGTCATCCGGTTGCTCAAAAGAAACACCAAATGTTTGGCAAACGATATTTACATGACCAAAGTGGACCGAATCTTAATATTTCACAATCGGCATCGAATGCTGGCGTTGTACAGCCACAACAGCCTGATATGCCAATCAAATATGAATTTGAACCATACCCAATGCATCATCCACTGGCTACAAATCTTGATGGTGCCGCTGGCGGTATGCCGATCATGAACAAGCATCAGTCACAACAACAATGTTCAATTGACTTTGGCCGACACAATCCACGTGGCATTCATGATATCGTTGGGCAcaatcacacatacactttgCCTCAAGCAAGCGGTGCAACACCACGGTCGCAACCGCGTGAtaagaaaaattccaaaaaagcTGAAGAGGAACATCTTACTCGGGACGAGAAACGTGCTCGTGCATTGAATGTTCCAATTGCAGTCATTGATATTATCAATTTGCCAATGGATGAATTCAATGAGCGGCTATCTAAATACGATCTCAGCGAAAATCAGCTATCACTGATTCGAGACATTAGACGTCGTGGCAAGAACAAGGTGGCCGCACAAAACTGCCGAAAACGTAAATTGGACCAAATTCTATCGTTGGCCGACGAAGTTGAAGAGGTGCGCAAGCGCAAAGAGCGTTTAATAAAAGAGCAGGAGGCCGCTTTAGCTGAACGAAAACGCATCATGAAGAAATTCCAAGATTTGTACAAGCATATTTTCGAGAATCTACGTGATCCACAAGGTAATCCATATTCGCCCAATGAATACAATCTACAACAGTCAGCCGATGGCGGTGTTCATCTTTTGCGCCGTGAAAATCGCAATACAAATCAGGTGAATGTGCAAATGCAACAGACCCAACAACCACAGCCgaatcaacagcagcaacagcaacagacCAATTCGACTCACCATATCAGTCATCACCACAATCCACACCACTGA
- Protein Sequence
- MMEIDLPRMQSLSPQFDSPSMDAMPGITNLTDVSSSTEPEPQPQPQPSSCSMKIANNCDWKFDSEICGCKYTNKSGCGCKYINKESEIVEVLWKQDVDLGYTLAPVKSSSPKESATVSGPSFSTEDNEKLKALQELKNDKPKQDEAKSPLDDEWAGINFTVDNETGEYIQLPLQLEEILQDVLQLADLANENDQVDEILAEELKKSEYSDVNGESSSAATASTSNQFDTNFAFPTDKVPTQDQQKDNKATNQSEIHSSELPLLLDPPLTEEEISADLSAIINEASDLDELDMMIQSAGPFQHPRSVAQNYGHANANMYHRQPSYHSHHHHQSRLSLSRASMEQRGLDIASLFSPLPGMGVGMNVTDMGSYTHYPPHYSYQGASSMPQHDQYGAHQHMALHNVSTGDMGANQSIPTIAPLPSQRSHYATPNLGSAVSSSMHLTNSSHDSDVLGATSNYKTEHEMMYYSNASSELNHTTDNFIASIMNYDDDLLMDISTNVNDGFYTMRMLEPNATNNNSAVLSAQAAQAAGSLNSNGAGLLPNAAGAPQMQTTLNGNTATTDRLDASSDSAVSSMGSERVPSLSDGEWGDTGSDSAQEYHSKYGPYDYSSYNGRLGDAVRHPVAQKKHQMFGKRYLHDQSGPNLNISQSASNAGVVQPQQPDMPIKYEFEPYPMHHPLATNLDGAAGGMPIMNKHQSQQQCSIDFGRHNPRGIHDIVGHNHTYTLPQASGATPRSQPRDKKNSKKAEEEHLTRDEKRARALNVPIAVIDIINLPMDEFNERLSKYDLSENQLSLIRDIRRRGKNKVAAQNCRKRKLDQILSLADEVEEVRKRKERLIKEQEAALAERKRIMKKFQDLYKHIFENLRDPQGNPYSPNEYNLQQSADGGVHLLRRENRNTNQVNVQMQQTQQPQPNQQQQQQQTNSTHHISHHHNPHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -