Basic Information

Insect: Sitobion miscanthi
Gene Symbol: Hivep2
Assembly: GCA_008086715.1
Location: Lachesis:10418503-10442692[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 5.8e-05 0.021 15.1 0.4 2 23 28 50 27 50 0.97

2 11 0.037 13 6.3 0.3 1 23 177 200 177 200 0.91

3 11 0.00021 0.076 13.3 0.6 1 23 208 230 208 230 0.97

4 11 2.1e-05 0.0076 16.5 3.3 1 23 236 259 236 259 0.98

5 11 0.0024 0.88 10.0 2.9 1 23 519 542 519 542 0.95

6 11 0.00037 0.13 12.6 0.5 3 23 730 750 729 750 0.98

7 11 3.6e-06 0.0013 18.9 3.1 1 23 756 779 756 779 0.97

8 11 0.00083 0.3 11.5 0.9 1 23 806 830 806 830 0.97

9 11 0.17 60 4.2 0.5 1 23 910 933 910 933 0.90

10 11 0.00013 0.048 14.0 2.2 3 23 967 987 966 987 0.97

11 11 0.0099 3.6 8.1 3.2 1 23 993 1016 993 1016 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	5.8e-05	0.021	15.1	0.4	2	23	28	50	27	50	0.97
2	11	0.037	13	6.3	0.3	1	23	177	200	177	200	0.91
3	11	0.00021	0.076	13.3	0.6	1	23	208	230	208	230	0.97
4	11	2.1e-05	0.0076	16.5	3.3	1	23	236	259	236	259	0.98
5	11	0.0024	0.88	10.0	2.9	1	23	519	542	519	542	0.95
6	11	0.00037	0.13	12.6	0.5	3	23	730	750	729	750	0.98
7	11	3.6e-06	0.0013	18.9	3.1	1	23	756	779	756	779	0.97
8	11	0.00083	0.3	11.5	0.9	1	23	806	830	806	830	0.97
9	11	0.17	60	4.2	0.5	1	23	910	933	910	933	0.90
10	11	0.00013	0.048	14.0	2.2	3	23	967	987	966	987	0.97
11	11	0.0099	3.6	8.1	3.2	1	23	993	1016	993	1016	0.95

Sequence Information

Coding Sequence: ATGTCATCGGAAATGTTGCGCGTAGACAATCTGCGACAAAGGTTGTTCTGTAATTCCGTGTTGGACACGAAAAGGGAAAGCCGGTGTCCCGTGTGCAACGCCATGTTTTCGACCACTTACAGTATGCGTCTGCACTTGCAGACTGTCCACATGGACTTAAAACCACAAAATCTGACCGCCAAAACGTTTTACCGCGAGTTCAATAACAACAATAGCATAAATAACAACAACAATAACAGTAGTAATAACAACAACAACAGCGCGGCATTCGCCGCAAAGTCACCGGCGAAAACGACGTCGTTCAACAACAGCCCGGAACTCGCGCACGTCACACCCGTCAAGTCTTCGTACAACGGTGACTCGACGTGCAGCACAGACTTTAGCGATGGATATCCGTCGGACAAGGATTCGTATTTTGGCGGCTCGCCCAAGGACGAAATTCCTCTGTCTGTGGCGGGTGGCGGTTTTATGTCACACTCGCCGGCCAACAAGAGGAGCAGCAACGGTCACATGAAGGCCAAGCGCACGTACGCGTGCAGGCTGTGCTCGACCGTATTCGGAAACCTGCGAGCGCTTAAGGGCCACAACTCGTCCAGCCACAACAAGTCCACTAACGGCATGTACGCGTGCAATATATGTGAGTTCGCCAGCACTGAAAAGGCGTCGCTGAACCACCACATGAAAGGCCACACGGGCGAGACGCCGTACGTGTGCAAAAAGTGCTCGTACGCGTTCACCACAAAGGCCAACTGCGAACGGCACCTGCGCACCATACACAAGGCATCCAACGCGGAGGTAAAGGCGTCGATACTCTTCAAGAACGAGGATAAACCGGCTGGGTCGGCGCAGTCGACCAACGACGAGGCAACAGCTGACAAGAACGAAGAACTGTACCATCACCTGCGTTTGCAGCATCACAACCAAACGACGACAGACTATTCCCAGTACGAATCGTCCGGGCAAAAGAGCTCAGAGGACGACGAGGACGAGTACGACGAGCCGCTGGACCTGAGCATGAAGCGTTTCAAACAGGACTTGGACTGCGAACCGCAAGATTTGTCAATCAATGGAAAGAGGTCGTCGTCGTCGTCGTCCGCTGCCGCTGTTGCTGCCGGTGATCACACGGACGAGGAGGACGTCAAACCGACCGAAACGATGGCGTTCCGTGAGCAATTCGTGCCACACGCCCCGCCCGGCTTCATGGACCTGTCGTTACCCACACCTTTGCACGCGTATTTCCTCAACGAGCACCGCATGTTCTTCAACGGAATGTACCCGGCCGCGGAACGCATGCTACCCATACCACTCACCGTCGACATGATCCGAGCAATGCGGCAGATGAACGAACCAGTGGTCGTCCCAGCTCAAGAGCTGGCAGACCCAGTCGTTCCACCAAAGCCAGAGACGCCTGAGCCCGCGGTCGTGCCGCCTCCGCCACCGGCACCATTGTCCGTGGACGTTGCGCAAAAACCAAAAGACAGCAATGGGTTGCGGTTGGTGATGAAAAACGGTATTCTAGTGCCCAAACAGAGACGGTTTAGGACGGACAGGCCACATGTATGCGAGACGTGCAAACGGGCGTTCACGTTGAAGTCAAACCGCGACCGGCACGTTAAAAACCAACATCCGACCGATTGGCACAAGAAACCCCGGTCGTTGTCGTCCAAGTCGGAACCGCAGTTCTCGACCGTCAAACAAGAACAACAGGACTCGTCGCCGATTTCGGATCAAGTGAAAATGGCCTTGTCGCTGAAATGCCGGCCGTCAGAACAGCTGCTGCGGACCGAAGACGAAGTGGATGAGGATGAAGAAGATGACGACGTAGTGGAAGAGGAGGACAAACTTGTCATAGTAGAAGACGGCGTAGAGAATAACAAGCCCGCCGGAGTCAAGGAAAAGTGCACCGAGGTCAAAGAGGAGTCCGCCGATCTGGTCAGTGTGTCCAGATTGTTGGACAACGCTTCGCACCAGACATTTCCGCAGTTCACCAGATCTGACGAGGACCACAACGAGGTGACCAGCAGTGAAGAAGAGCACAGCGAGGCTGCCAGCTATTCCGAAAACGACGGTTCTAGTATCAATGCCGTCAACAACAACATCGATATAAATTTTAACACGGACAAGGACGACAACCGGGAAAAGCGAAAAAAGGTCAGTGCGTACGCGGCCGCGCCCAACAGAGTGCTGTGCCCGTTCTGTTACCTGTCGTTCCCGTGGACTTCATCACTGAAACGGCACATCCGCACGCACACGGGTGAAAAGCCGTACCAGTGCAAACACTGTCCGCTGTCGTTCTCGACCAAGTCAAATCGCGACCGGCACATCCTGCGCCTGCACTGCACGCCGCCCAGCAAGTCAGCCGCATCGTCCGACAACGAGACGACCGCCGCCGCGCCCACCGACTCTAAGAACGCGTACAAGTGCACGTCGTGTCCGAACGTGACGTTTTCCAAGCGCAAGAACCTGATCAGCCACATAAATCGGGTGCACTTCGACAAGAACGGCGGCGGCGGCGCCGCGGGAGAGGATGACGAACGAGGCGGCGACGGAACCGAGGACGACGGTGGCGAGTCGGAACGTGACTTTTCGATGGCCATGTTCAACGGATGGTGCGGCAACAACGCGGCCCCGGCGACCACCACTGCCAATACCACCACACAGTCAGCCGCCACTGCCGCCGCCTCCACCATCACCCCGTCCAACACGGTCACCGGATCCGAACCGTGTTTCAAGTGTCATCTGTGCGATAGCAGCTACCTGGACAGGCAGGGCGCTCTGGATCACATCCGGATCGACCACGCCGAGTGTTACGAGATACTGGTATCGCAGGGGGCCATGGACAACGACCATGACTCGTCGGCCGTCAAACAAGACGACGTGGAAAACAGAAAGGTCCTTTGCGCGTTCTGCCTGCACCGTTTCTACTCGGCCGAGGACCTGCGCCGTCACATGCGCACCCACACCAAGGAACAGCCGTTCGCGTGCCTGTCGTGCAAGCGTCGGTTCACGCTCAAGCACAGCATGGTCCGGCACATAGCCAAAAAGCACGGCGGCTGTCAAGACCAGCAGTACGGAGGCGGCGGCGGCGGCGCTGGAGGCGGTAGCGACCACGAACGGAGGTCCGCCAGTCCTCCGAGCACCCCTCCGCCGACGGGACCGATCGCCGGTTACGAGGACTGCTGCGGCAACCGGACGGACACGGGCCTGATCGGCACGCTGCTCGGCATCCGAGACAGCACGGTCATCGACCAGGTGTTGCAGACGAAGTCGCCCGAAGACGCGGCCAAGATGTTGGGAATCAAAAGCAGCAGCGACTAA
Protein Sequence: MSSEMLRVDNLRQRLFCNSVLDTKRESRCPVCNAMFSTTYSMRLHLQTVHMDLKPQNLTAKTFYREFNNNNSINNNNNNSSNNNNNSAAFAAKSPAKTTSFNNSPELAHVTPVKSSYNGDSTCSTDFSDGYPSDKDSYFGGSPKDEIPLSVAGGGFMSHSPANKRSSNGHMKAKRTYACRLCSTVFGNLRALKGHNSSSHNKSTNGMYACNICEFASTEKASLNHHMKGHTGETPYVCKKCSYAFTTKANCERHLRTIHKASNAEVKASILFKNEDKPAGSAQSTNDEATADKNEELYHHLRLQHHNQTTTDYSQYESSGQKSSEDDEDEYDEPLDLSMKRFKQDLDCEPQDLSINGKRSSSSSSAAAVAAGDHTDEEDVKPTETMAFREQFVPHAPPGFMDLSLPTPLHAYFLNEHRMFFNGMYPAAERMLPIPLTVDMIRAMRQMNEPVVVPAQELADPVVPPKPETPEPAVVPPPPPAPLSVDVAQKPKDSNGLRLVMKNGILVPKQRRFRTDRPHVCETCKRAFTLKSNRDRHVKNQHPTDWHKKPRSLSSKSEPQFSTVKQEQQDSSPISDQVKMALSLKCRPSEQLLRTEDEVDEDEEDDDVVEEEDKLVIVEDGVENNKPAGVKEKCTEVKEESADLVSVSRLLDNASHQTFPQFTRSDEDHNEVTSSEEEHSEAASYSENDGSSINAVNNNIDINFNTDKDDNREKRKKVSAYAAAPNRVLCPFCYLSFPWTSSLKRHIRTHTGEKPYQCKHCPLSFSTKSNRDRHILRLHCTPPSKSAASSDNETTAAAPTDSKNAYKCTSCPNVTFSKRKNLISHINRVHFDKNGGGGAAGEDDERGGDGTEDDGGESERDFSMAMFNGWCGNNAAPATTTANTTTQSAATAAASTITPSNTVTGSEPCFKCHLCDSSYLDRQGALDHIRIDHAECYEILVSQGAMDNDHDSSAVKQDDVENRKVLCAFCLHRFYSAEDLRRHMRTHTKEQPFACLSCKRRFTLKHSMVRHIAKKHGGCQDQQYGGGGGGAGGGSDHERRSASPPSTPPPTGPIAGYEDCCGNRTDTGLIGTLLGIRDSTVIDQVLQTKSPEDAAKMLGIKSSSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00135687;
90% Identity: iTF_00134839;
80% Identity: -