Basic Information

Insect: Sisyra terminalis
Gene Symbol: -
Assembly: GCA_958496175.1
Location: OY292278.1:42831126-42859884[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.043 2.8 8.7 1.7 1 23 179 202 179 202 0.97

2 21 0.0057 0.38 11.5 4.1 2 23 302 324 301 324 0.95

3 21 0.017 1.1 10.0 0.8 2 23 358 379 357 379 0.97

4 21 0.23 15 6.4 0.1 2 22 625 645 624 645 0.95

5 21 0.02 1.3 9.8 5.2 2 21 666 685 665 686 0.94

6 21 5.9 3.9e+02 2.0 0.5 1 23 808 830 808 830 0.78

7 21 0.036 2.4 9.0 0.5 2 23 975 996 974 996 0.96

8 21 3.7 2.5e+02 2.6 0.8 2 23 1100 1121 1100 1121 0.89

9 21 0.13 8.5 7.2 0.3 1 23 1129 1151 1129 1151 0.97

10 21 0.16 11 7.0 2.7 1 23 1186 1208 1186 1208 0.96

11 21 0.0035 0.23 12.2 4.1 1 23 1215 1237 1215 1237 0.98

12 21 5.1 3.4e+02 2.2 2.6 1 23 1288 1310 1288 1311 0.93

13 21 0.049 3.2 8.6 1.8 1 23 1321 1343 1321 1343 0.98

14 21 0.57 38 5.2 1.3 1 23 1400 1422 1400 1422 0.96

15 21 2.3 1.5e+02 3.3 3.6 6 23 1433 1450 1428 1450 0.94

16 21 2.6 1.7e+02 3.1 5.3 1 23 1522 1544 1522 1544 0.89

17 21 4e-05 0.0026 18.3 1.3 1 23 1550 1572 1550 1572 0.98

18 21 0.0096 0.63 10.8 3.5 1 23 1657 1679 1657 1679 0.97

19 21 0.013 0.85 10.4 1.9 1 23 1685 1707 1685 1707 0.99

20 21 0.08 5.3 7.9 0.8 1 23 1790 1812 1790 1812 0.98

21 21 0.00077 0.051 14.3 3.4 1 23 1822 1844 1822 1844 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.043	2.8	8.7	1.7	1	23	179	202	179	202	0.97
2	21	0.0057	0.38	11.5	4.1	2	23	302	324	301	324	0.95
3	21	0.017	1.1	10.0	0.8	2	23	358	379	357	379	0.97
4	21	0.23	15	6.4	0.1	2	22	625	645	624	645	0.95
5	21	0.02	1.3	9.8	5.2	2	21	666	685	665	686	0.94
6	21	5.9	3.9e+02	2.0	0.5	1	23	808	830	808	830	0.78
7	21	0.036	2.4	9.0	0.5	2	23	975	996	974	996	0.96
8	21	3.7	2.5e+02	2.6	0.8	2	23	1100	1121	1100	1121	0.89
9	21	0.13	8.5	7.2	0.3	1	23	1129	1151	1129	1151	0.97
10	21	0.16	11	7.0	2.7	1	23	1186	1208	1186	1208	0.96
11	21	0.0035	0.23	12.2	4.1	1	23	1215	1237	1215	1237	0.98
12	21	5.1	3.4e+02	2.2	2.6	1	23	1288	1310	1288	1311	0.93
13	21	0.049	3.2	8.6	1.8	1	23	1321	1343	1321	1343	0.98
14	21	0.57	38	5.2	1.3	1	23	1400	1422	1400	1422	0.96
15	21	2.3	1.5e+02	3.3	3.6	6	23	1433	1450	1428	1450	0.94
16	21	2.6	1.7e+02	3.1	5.3	1	23	1522	1544	1522	1544	0.89
17	21	4e-05	0.0026	18.3	1.3	1	23	1550	1572	1550	1572	0.98
18	21	0.0096	0.63	10.8	3.5	1	23	1657	1679	1657	1679	0.97
19	21	0.013	0.85	10.4	1.9	1	23	1685	1707	1685	1707	0.99
20	21	0.08	5.3	7.9	0.8	1	23	1790	1812	1790	1812	0.98
21	21	0.00077	0.051	14.3	3.4	1	23	1822	1844	1822	1844	0.99

Sequence Information

Coding Sequence: ATGGACGACAAAGAGGGACGCGCACCGGGAATGGATGGTGATGGTCCTCGTCAAATGCAGAGTCTGCACGAAAAGGCACACCACTACCACAACGACAGTAGTCCCAAAACGGACGGCACCGCCTCGTGGCATCGTTCTCATCGTCATCTCAAGCTCTATCGCCGTTACCCTCTCGTTCGATATTTTCTCGTAGATACATATAGACGGCCAGATCTCTATATGTCGGCGCCGTCGATGGTGACCCGGGCCGGTGACTCGCTGGTCGTCCGCAGTGTCGTCAGCGGGAATCAATTGTTCGTGGACGATGAAGACGTGTCACACGTGGCAACGCCACTCGAGTCCACCTCGTCAATGTTGACACCGCGTATTGTTGTCAATGACGACGACGGTGACAACAATATCAGCGTCGTCAAAGACTTACCCCAGTGTAAAGTGAAACGTAACTATGCATGCAATGTGTGCAATTATTTCACGCAAAATCCTCGACAACATTTGCTCCATTTACGCGACGTGCACAAAGAGAAAGTGAAAATCTACGACTGTCGCGATTGTTTATACGCGTCGaagcattttcaaaaattggcGCGCCATATGCGTATTGTACATGGCAAAGTTGATAATGGAATTGCGACGCCGGACATGATGGGAGCGACGCCTGTGCGCCGGATTCGTAAGCGTAGTCGACGTCCGATGGACGAAGAGTATGCGAATGAGGAGGCGTCGCTTATCGAAGATGAAGCATCGCCGTCGCCGCTGCTGGGTGACCACGAACCTGACGACGACGATCTTGACCAAAGTACAAACGCGGGAAATTTGAACAACAACACCAGCACCATcaataacaacaacaacaatgGCAAATTGAAAGGTGGAGGAAATAAGACATCCGTTGCGCCGAAATTGAAATGTTCATTATGCCCGTTTACCACACGCCATCAAGGCCATTTAACACGCCACGAGCGGCAAGATCACATCAAGACGCGGTTCTTTCGTTGCGTCAAATGCAACTATGCGACGCATATAAAAGCGCGCTTTACCAAACACGTGAAATACCATTCGATGCCAATGATCAAGTGTGATTTATGCGATTTTCGTACGCCGTACAAATGGAATTTGGATCGGCACTACAAAAACCACAATGGCCGCGGTGCGTTCAAGTGTTGTGCGTGCAACTTTACCGCAGACATCAAGCAAAGCTTGACCGTACATGAGATGAACCATCATGTGCCGCCCGTGGGACAGGCGGCCACCGCCGGGCTCGGCGTCGGACGGCGTCGCTACAAGGTCGGGGCCAGTGATTCGAATATCGCGCCAACGTCGTCAGACGACATCATCGACCCAAAAGAGGAAACTCAGAAATCTCGGACTGATAAACTGCTAAGAAAGCTGGCGAACAATCGGCAATTAGAGATTGTTGCATCTCGCAAAATCGATGCCACCGATGCCTTAAACTCAAGTCCACCCCCGAAGAAAAAATCGCGCCCTATTCCGAATTTAATTCCTATTCAAAACACATCACAAGCAGCCCTGAAAAAGCTATCGACCCCATACAGTCCAGAACAAGCAATATTGTCGCCAATTAATATCAGCCAAAAAGATTTGAACAGTCTATGGTCGAAGTCCTTCCTAAGCGATTTTGCATCTCTGCTCGACGAAACCAGCACCAGTCATCCACTAACCACCGATTTAAACAAATTCAACGACATAGTAGAAATCACAGCgatcaaaaaaatcgataacaATTCCCAACAAACGGTTCAGAAAACTCCAACTTTACAAACGCTAGCGTTGGGTAAAAAGAATGCCTCGTTCTTTGATCAGCTGAAAGAAAAACTGCTGACCAACGCTAAATCGGCCAACGAGAATAATCTAACATGTCAAGGCTGCGGTCACATCGCAAAAAGCCTATCCGAAATGGCAAGCCATCAAAAAACATGCGGAAAGTTCACCGAAGAAAAAATCCACGAACCACTTGCGTCATACTATGGCTCGACACGATGTCAATATTGTCGGCAACGATGCAAATCAAGTTCCGATTTATTCCATCACATGCAAAGTTGCAGTAAAGTCAATGTCAATAAAACGCAACACGATAAAGAAACGGAGCCGCAAGAGTTTCGCGACGATGAGAACAGTAATGAAAATCGTGCCGCGCCGCATCcaatggaaaataaagttttcgtCTGGAATAACATTCCGGAAACGATCAATGAAACGGTCAATGATAATGTGATGGAATACGATGAGGAAATCAACGGAGGGACTTCCGATGGTCTTGATTTAACCGTCAACAGTGTGGATACGTCTTCGAATGTCAGTGTCGAGTCATCTTCAGTACAAAATAACGCATCTTCTACCTCAAAACCAGTGACTCATGGCACCGACGCCGACATGGCCTTAGCTCCTGGctgtaaaaaagttttcaaatgtCCCGATTGCTCGTTCTGGGCCACAACTGCATCTCGTTTCCACGTGCATATCGTTGGccatttgaataaaaaaccGTTCGAATGTTCCCTATGTGCGTATCGATCCAACTGGCGTTGGGATATCACAAAACATATTCGCTTGAAGTCTGTACGGGATTCGAACCATCAAAAAGCCCGGGTATTAATGACAGACGAAACTGGTCGTCGTAACTATTCCAAATACAATAAATATCTGATGCAAATGAAAGATACGATTACTTCCCCTGTCGAGAAACAATCGTCCAGTCGAAAAACACGTAGTTATGAAACGCAAGGAAATGACGATCAAGCTTTGTTTATTAGTTTACCGGATTCGGTGAAGAGCACTCGTTTACGAGGAGATTCCGTGAATCATTCCGGGGAGAGATTCGTACACTTGGGCAGCGATGAGGCAAAGAAGAATAGTTTAATGAACATTCCACCGTTGACGCCGATGACGAAAAAATCGCTTTGGAAATGTAAAAAGTGTAATATGCGAAGTGAAGACCGTCAAGCGCTAATCCAACACGTGAAGGAGCACTACGTTCAGGAGGCGAGCGAACAAATCGAGGACGATCAGATTGTGGAAAACGCTGAAAACGGGCCGGAGGACTCCCGACCCGAGAACAGCAATGATGAGGCAAGTGTTGGCCGCAGTGGTGGAGGCCAAGCGCCCTTCCGTTGTGGTCATTGTCACCAGGTATCAAACTGGAAGCATGTTATTCAGCGCCATTGTCGGCTCAAGCACAACGGAGATGTTCGCGTTATAATCGGCGAAACAAGCCACACATCTTCCGCAATGGATGAACAATCTGACGATTGTGTGGTGGTCGGCGATGAGAACACCGAACAATGTCCGCACTGTCCGTACAAAAGTGATGTTGCAATTTCGATGAACGACCATTTGGTGCATCACACCCCCAACTCCGATGCCGTTTTCAAATGTGTCACTTGTCCGTATTATGTGGAGGACAAGAAATCGTTATTTGAACATCTAGCCCTACATGGAATCACCCAGCCAGAACAATATCTGGACAGGGCTACAATTGACGAAAACGAGAAAAATGGCTTAACACTAAGCGACGCACCACCGCCAGTTTTCAAACGATACCAATGCCAATCTTGCCCTTATGTAAGCAACagtaaaagtcaatttttataCCACAAACAATTCCACCGGCCTCGTGGAGCCCCTTTCCAATGTGATGTGTGCAACTACAACGTTTCGCGACGCCACCTTCTACATCAACATCTAAAAGTTCACGGAATCCAAAACCAAAAACCCAAAGACAACGACACCAACAATTCGGACATTGAGGCCGTTGAAAACGGCGACGACGACGAATTGGAAACGCAACACTTATCCGAAGTTCCTCTAGTTTGGCTTCAGCTAGACAATCAATTTGTTAAAACGTTCAAATGCCGCTACTGCCCTTACACCAACATCAACAAACCCAACATACAAGAACACGAAAAATTCCATCATCTAATCCTCACCGGCCATGGCAACGACTTCAAATGTCCCGACTGCACGTTCATCTGCAACGGTGCCAAAGGTTTGAATTTGCACCGCAAATACCACCAAGGCGCCTTTGGACAAATCCATTGCCTAGTCGATTTAAAGAAAAGCGACGAAGAACAAATCTCGCAACTGTCCAAACTCCTAAATCCACCACTACCTCCGGAACAACTTCAAATTGATTTGCAAACCAACAATAACAAATCGGACGATGAAAAAGAACGCGTTTTATACTTTTGCGATAGTTGTCCGGCAagatttttatccaaaaaagaATTCCTCATTCACATGAAATTCCATTCAATTCGATTGGCGTTCCGGTGCATTTGTTGCTCATATACATCGCGGCAAAACGCTCATTTGCTTTCCCATATCAAAGTCCATACGGAAGAATATCAAGATAAGACTAAAGTATTAGAAACCATGTATCCAGTGCATGAGAACCACAAAAAACCTAATACAGCAATTTTAATGAATGTCCCTGAAATGAATGGACCGGCATGGGTTGTGGTATCCACACGAAGTGCTGATAGTCCTCATAAGTATGAAGACGATATTGAAGAGCAAATAATTGTAGAACATACgcctcaaaaattttatcagtgCAACATTTGTTTCACGAAATTCTTGAAATTCAGTGCATTGCAACATCATAAAACGTTCCATGGCAGTGACAATCCGTTTAAGTGCCACTATTGTGATTATGCAGCGAAAACTGCTGAAAATCTAAATCGGCATCGAATAGTTCACGATGAAACCGATTCTGAACCCGAAAATATTGAGCCCAAAGTGAATAAGCCACAACCAATGCCAGTGTCCATATCCGGCACGGATTTATACCTACAAAAATGCGAGGCCGAAAGCAACTACAACGAAAATGCGACCACTTCACGACAAGTATCCTCGTTGCATGTCGATCCACAATTTGGGATTTTGATGCATGGAAGTCCTGAATTCATTTATCCGACGTATATGAAAAATGGTCGTATGAAGGAAAAACGGTATAAGTGCCACAAATGTCCGTCCGCCTTTGAAAAACGGGAGCAATACAAGAATCATTTAACACTGCACGGATCTAAGCAACGTTATCGGTGCAAAGCATGCGATTATTCGGTGAAGTATTATGCGAATTATGTGCAGCATACTCGGAAGCATCAAATTAACGATGATGCACAAGCCGCGAAATTAAAAAGTCGCCAAAATTCTAGTACAGATGAACAGAGCGATGATAATGTGGAAAATGTGTCGTTTGCAGCTAAGACTGTTCTTCCGGCTGCATCATCACCGCGTGGTCCATTAAAACTTTCCGTGGCCGATCGGCAAAGTTTGATGATTCTGCAACAACGTCGTTCCAACAACATACAAAACCAAAAACCTAGTATTCCtgatgataaaaaaatgtactcATGTCCGATTTGTCCGTATGCAAATTGTCGTCGCGATTCAGTGGACAATCATATAAAACGCCACATTTCCATCAGTGGCTACGAAAGCAATTACACCTGCACCCATTGTGATTATTCCGTACCCCAATCACATTTCCTCCGCGACCACATCAAAATCCATTTCACCCCAATGAAAAGCAATAAAGTTGAGGCCTACATGGTATGTGACAAACTACAACTCTACGCCAGTGAAATCAACAGTGCAGACGAAGAAAAAGCCGAAGCAAACGGCATTGTTATATTTCAGGAAAAAAACGGAAAATACAGTCCGGCCATTGACGACGAAGAGGATTGTCTGGTGATCGATGAAAGTGGCCTCGACGAAATGGTCATAATAAATGCCCAAACCGGAGAACCTATTAGTGATACCAATAATGAAATCGAGTCAAAAGAAGCCAAAGAATCAACCGATGAGTTGATTtaa
Protein Sequence: MDDKEGRAPGMDGDGPRQMQSLHEKAHHYHNDSSPKTDGTASWHRSHRHLKLYRRYPLVRYFLVDTYRRPDLYMSAPSMVTRAGDSLVVRSVVSGNQLFVDDEDVSHVATPLESTSSMLTPRIVVNDDDGDNNISVVKDLPQCKVKRNYACNVCNYFTQNPRQHLLHLRDVHKEKVKIYDCRDCLYASKHFQKLARHMRIVHGKVDNGIATPDMMGATPVRRIRKRSRRPMDEEYANEEASLIEDEASPSPLLGDHEPDDDDLDQSTNAGNLNNNTSTINNNNNNGKLKGGGNKTSVAPKLKCSLCPFTTRHQGHLTRHERQDHIKTRFFRCVKCNYATHIKARFTKHVKYHSMPMIKCDLCDFRTPYKWNLDRHYKNHNGRGAFKCCACNFTADIKQSLTVHEMNHHVPPVGQAATAGLGVGRRRYKVGASDSNIAPTSSDDIIDPKEETQKSRTDKLLRKLANNRQLEIVASRKIDATDALNSSPPPKKKSRPIPNLIPIQNTSQAALKKLSTPYSPEQAILSPINISQKDLNSLWSKSFLSDFASLLDETSTSHPLTTDLNKFNDIVEITAIKKIDNNSQQTVQKTPTLQTLALGKKNASFFDQLKEKLLTNAKSANENNLTCQGCGHIAKSLSEMASHQKTCGKFTEEKIHEPLASYYGSTRCQYCRQRCKSSSDLFHHMQSCSKVNVNKTQHDKETEPQEFRDDENSNENRAAPHPMENKVFVWNNIPETINETVNDNVMEYDEEINGGTSDGLDLTVNSVDTSSNVSVESSSVQNNASSTSKPVTHGTDADMALAPGCKKVFKCPDCSFWATTASRFHVHIVGHLNKKPFECSLCAYRSNWRWDITKHIRLKSVRDSNHQKARVLMTDETGRRNYSKYNKYLMQMKDTITSPVEKQSSSRKTRSYETQGNDDQALFISLPDSVKSTRLRGDSVNHSGERFVHLGSDEAKKNSLMNIPPLTPMTKKSLWKCKKCNMRSEDRQALIQHVKEHYVQEASEQIEDDQIVENAENGPEDSRPENSNDEASVGRSGGGQAPFRCGHCHQVSNWKHVIQRHCRLKHNGDVRVIIGETSHTSSAMDEQSDDCVVVGDENTEQCPHCPYKSDVAISMNDHLVHHTPNSDAVFKCVTCPYYVEDKKSLFEHLALHGITQPEQYLDRATIDENEKNGLTLSDAPPPVFKRYQCQSCPYVSNSKSQFLYHKQFHRPRGAPFQCDVCNYNVSRRHLLHQHLKVHGIQNQKPKDNDTNNSDIEAVENGDDDELETQHLSEVPLVWLQLDNQFVKTFKCRYCPYTNINKPNIQEHEKFHHLILTGHGNDFKCPDCTFICNGAKGLNLHRKYHQGAFGQIHCLVDLKKSDEEQISQLSKLLNPPLPPEQLQIDLQTNNNKSDDEKERVLYFCDSCPARFLSKKEFLIHMKFHSIRLAFRCICCSYTSRQNAHLLSHIKVHTEEYQDKTKVLETMYPVHENHKKPNTAILMNVPEMNGPAWVVVSTRSADSPHKYEDDIEEQIIVEHTPQKFYQCNICFTKFLKFSALQHHKTFHGSDNPFKCHYCDYAAKTAENLNRHRIVHDETDSEPENIEPKVNKPQPMPVSISGTDLYLQKCEAESNYNENATTSRQVSSLHVDPQFGILMHGSPEFIYPTYMKNGRMKEKRYKCHKCPSAFEKREQYKNHLTLHGSKQRYRCKACDYSVKYYANYVQHTRKHQINDDAQAAKLKSRQNSSTDEQSDDNVENVSFAAKTVLPAASSPRGPLKLSVADRQSLMILQQRRSNNIQNQKPSIPDDKKMYSCPICPYANCRRDSVDNHIKRHISISGYESNYTCTHCDYSVPQSHFLRDHIKIHFTPMKSNKVEAYMVCDKLQLYASEINSADEEKAEANGIVIFQEKNGKYSPAIDDEEDCLVIDESGLDEMVIINAQTGEPISDTNNEIESKEAKESTDELI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -