Ster010547.2
Basic Information
- Insect
- Sisyra terminalis
- Gene Symbol
- Hivep1_1
- Assembly
- GCA_958496175.1
- Location
- OY292277.1:7492622-7503350[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 8.4e-05 0.0055 17.3 1.4 1 23 236 258 236 258 0.98 2 8 0.0072 0.48 11.2 4.3 1 21 264 284 264 288 0.89 3 8 0.0064 0.42 11.4 0.6 1 21 495 515 495 516 0.95 4 8 4.9e-06 0.00033 21.1 2.1 1 23 1205 1227 1205 1227 0.99 5 8 1.1e-05 0.00075 20.0 5.0 1 23 1233 1257 1233 1257 0.92 6 8 2.4e-05 0.0016 19.0 0.7 2 23 1842 1863 1841 1863 0.97 7 8 0.00037 0.024 15.2 2.2 1 23 1869 1893 1869 1893 0.92 8 8 0.00095 0.063 14.0 2.7 1 23 1911 1935 1911 1935 0.93
Sequence Information
- Coding Sequence
- ATGGAAAATTCAACTGGTGCTAAATATCTTCATAAGAAGTTTAAGAAGCCAACCCCGACAACAGTAACGATTACAAAACGTTGCGACGATGACGAGCACCAAACCAACAACAATCGTCTAGATTTGGAGTCAAAAACTTCCGTTTCGGTTTTGGGGGCGCAACAAAATGATGTTTTAATTACTAGTAGCAGTAGTACAAATAGTGTTAATCAACAAAATGACCAAGTGGCTTCCATATCAACTTCTGCGGCTTCGCCGACATCGCCGCGCCAAAACGACAGATTGTACGCAAACCATGAAGATGATGTCGACGAGGAGCACCGGAACCTATTTACACATTCAGCGCCAAATAATTTAGCCAATAAGTTAGAGAATTTTATTGATGATAAGACTTGTACCAACCGTAGTAATTCAATAGTTAAACCAGCAGACCAATCAAACAACAACAACATATCATCGAGTGAATCAGATCGTAGTAAAATTAATGGAATTTACAGTAGTCACAAATGGGACTCGACGACGTCTTCCACATTGAAACCTAGTGTTAGTACGAGTAGTGTTTTTTTATCGAATTCCCACAATTCCGAACCTAGTGAAAGTGATGATAAGAAAAACGTGGTGGCGTCAGAACCGGGCACCGGGCCGAGTTCGGTCAGCGGAGGCCTAACTGCGACGAGTACAACCGGGAGTAGCGGAGGCGGCAAATATGTGTGTTCCTATTGCAATTTGTCGTGCTCGAAGCCGAGCGTTTTGCAAAAACATATCAGAGCCCACACCAACGAACGACCATATCCTTGTGTCAGTTGCGGTTTTAGTTTCAAAACACGTTCCAATCTGTACAAACATTGCCGTTCACGTTCGCATGCGAACCGCGCCAAAGATTCACCCGAAAGTACGGCAAACTCAACGCCAAGCACGGCGACCATTTCAACAACAATTGTCACATCAACGTCGACCACCACCACCACCTCGAACTCCACCCCGACAAATCAATCAATCGCACCCATCTCCAACCATATCAACAACGAAAATGTCATGCCCAAAAACAAGCCATATAAaccaaaattcaaattgttgTCGCAACAAAATCGTGAAAACGAGGACAAAATCGAGCAGAAAACTCCAACGGCATCGTTACAACCTGCCACAGTCACGTCAGATCTCGTCAAACAAAACCCCGACTTATTAAATCAGCACattacaaatttaattcataaaaatcaaacaattctCGATGTCAACGAAAGTAACTACATCAAAAGGCGCTTCATCTGCCAGCAGCAACTCCTTCAAAACGATTCGGTCAATTCCAACGATGAAAATCAACCGTTCAAAGCAAAAACCTTATACGAATCGAATTTTAACGATGAACCGTTAAACTTAACTGCGAGAAATCGAAAGCGATGCATGAGCGAAACTGAACACACTCAAAAGAGCCTAATCAAAGAATTGCTGCTGAAAAATTTGTCGCAAGACCACAGCTACGTGTGCCAATTTTGTAAgatttcctttaagaatatcgaaaattttgagatacatcgaaaaaattattgtaaagtcGGTGAAAATCCCACCTCGAAAGACATAGCCTTTGTGCGAAGTCATTCCGTCAATGTTGCCTCGGTGTTGACTCAAAAATATTCCCGCAACAATGAAAGCCCGACGAAATTTGTGCGCACCACGTTACCGCTGAAGTCTCCAGGTCCGTTTTTGGGAAAAACGAGTTTGGTCGACTCGAAAGTGCCGCAACAGCAAAGCGTGGCTGTAGCGAACACACTGCCCAATCCGCTGGTGATGCCCAACCAGGTGTTCTACGAAAATAGAAATCCCACAAAGATTCATCGACCCGTCGAAGACAAAAGTGCCAAACCGTCGCTAAACTTTGTTCTTCCATCGCCCAACGACAAACGTGGCAATTCCGATGATTTCCACGCGTACAACTCGTCGATGCTCCTGAAAAAACAAAGCCAAACTCCACAAGTACGTCTTTTCGGCGGCGAAGTTAAAATCACCAATGAAACATCCGGTGAGACGCGCAGCTTTAAAATCGACTCGTCGAAAAACGTGAACGATTTTTCCGCACAGCATTCACCGCAATATATTTACGGCAACAAAATCAGTGAAAATATGGTTGTTAAGTCCGGGTTGCAGTCGGGTGgaacaattttacaaaatacaCCAACTTATGATACTAAATCGGACGATGGAAAGCCTATGTTTCAATATTATGATTCATCAAGTTTGCATGGTAAACCTGAAAAGCGGAGTCTTTCGCAAGAACATCACTCGTCACCGCGGTTTTCGTTTCCCGATGAATCTTTGCTGTCCACGTCGGCATCATCTGGATCGATTTACGACCAAAATATGATTGATTTCACTCAAAAAACGGCGAAAATGTTTGCACCTAATttgaaacaaccaaatttaacgATTCCTGGTCTTCCGATTCCCAATAAAGTGTTCAATAGttcaccaaaaaataattttgaacctCCAGCGAATTGGTCAACCACGTCTTGTGTAACAACGTTAAGCATCACATCGCCGTcttcaataatcaaatttagTCAATCCCAACCAAAAACTTCTCCACCAATTAAACCGACTCTTTCATCGGATTTCGATCGCAACATTAACGCAATCAACGCGTCTGGAGTTGCTTcccaatttcgatttttaaaaccGTTGCACATTCTCGTTAATGGGAAGTTGGTGCCATTTATTCCCGGAATGCCTGGTCCGGCAGAAGTTAGTCCAACCGTGGTTGTTCCAACCATGCCTCCAATCGGGGTAGTCCAAGCCAATCCTAATCCTTCACTCCTTTCACCGAAAGTAATGAAAAACGATCCTCCTCTATTCCCTGAAAAACAATTCATTCAAAAAGCTCCTTCCAGCCCCATAAGCAACGCATATTTGGTAGATCAACCAAAACTAGCCGAATCGAAAATTCCGGATAATCAACGCAAACTTTTGAAAAGCTTTCGAATTAAACAATCAAATGGATCGAGTGACGATCGAAAATCTGATAGTAATCCAATCACTACTGTTAAAGAAGACGTTACCGTTATTTCCGAGCCTACGACTTCAGGATTGGGGAGTAAATTTTTGCGTCCAAATAGCTTGGCGATTAAACCGTACATACCGATGAAAACCCATCATGGACTCACCCCGACTATGTTCAATCAGGCATTGATTAGTCCGGATACGCCGCGTGTTGCGAAAAAGAACTGCCAGCTGTACTTGAACGGCAATTGCTTCAGCTATTTGGGACTGAAAAGCTCCACGAAACCCACATATTGTACGCTAAATAAGACGCAGCCGTTTTATGTGCAAAGCTTTGGAAAGCTCAGCATGTATTCGGCATGGCGACATTTGGAGTGCAAGTTGGACTATGTGCGATTGGATACGTACGATTCGAGGCAGCGTCGCCAGAATTACAgtgttgcaaaaattaaaatgccCGATTTGATTGTGGACTCCAGCTATAAGtcggttttgattgaaaatattgacaAGAAAGAAGAAACCAACAATAGAAGTGGACTGGTGTTACAAGGCGGATATGAATCGAATGAGGACTACACTTATATTAGAGGAAGAGgaCGAGGTCGTTACGTTTGTGATCAATGCGGAATTCGGTGTAAGAAGCCGTCAATGCTGAAAAAGCATATTCGCACTCATTCCGATGTACGACCATACACCTGTCGACATTGCAATTTTAGTTTTAAAACGAAAGGCAATTTGACCAAGCATATGAAGAGTAAAGCGCACTACAAACGTACAACTAGTGGCGTTCCAAATTCACCAGGAGTCAATGGAGATAATCAACCGTCGCAGTGTAGCACTCCGTCTGATGATGATAGTGATACAGATATGGAGAATGAAAATGATAGTGATGATTCAACTCGTCTACAAGATCACGAAGCCGCGCATTGTCTATTATCATTGGCCCAAAATCGTTCACCCAATCAAGTGTCCAATTCGGTTGACTCGTCGGAAACGGCGGAAATTGCCAATGAACGTTTGGCGATTACTTCCAGTCCCGATAATACAAACTTATCGGAAACTTCGTCGACGTCGTCGGTTAAATCTCTCAGTTCGACGACTTCGTCGTCTTCCATGCCCGTGCCAACTGCTTTGGATACAATGTCATCGCGAAAACCGCTCACCTATCCTTACTACAAAGTGCAATCGAAAAAACCAAACACGAACGGTAGCAGCGCCAGTAGTGGCTCGAATGACGTGGAGACAAAGCCAAATATTGTTTTGTATACGGACGTTAGTTCGATCTTTAATCAAGTGATATTGGGCGAGAAGAATATTGAGTTGAACCACCTGGAGTCGTGCATTAGTGGCGTTACAAACAGTGTGATTGTTAGTGGCAGTGGCAATGCGATTGCAAGTTGTAATGGTGTGGATGATCCAAGAACGAAAATGGTTACGACACCaacgaaaattcaatttattagtGATAAACTCCCGAATGCCGATGTTACAATTGcgaattttcaacaaaaatttgttaagtATGAGCAACAACGGGCTGCGATAGCAGCCGCGGCTGCCGCCGCGGCTGGTTCCACCGATTCCGTAAATGGTCAAGAACCAAAACGACTGGCCATCACTCTTCCCCCACTTCCCGAATCCCGAAGAAAAATGCAAGAGGAACTTCTTCTACATTCTCGCCTAACTACCCAAAATGTAACAGCTCCCGCCGAACCTGTTATCATAACAACAGCGTCAGTAATTCGAAAAGTTTACGACAGCTCTCCAATCATTTCCTATCCAACCAATCAAACCAAATCTCCATTAAGTCCTATGTATAAAAACCGAAAACGAAAACTATCGTATAATGTTCACGAAGAAAATATGCAATCAATCGACTTGTCAGCCAATAAAGGAATTGATTTGTCGACAATAAATCGAGAGTATGATAACCACCGAATCACTCCGAATAGTTTACCTCCAATTCCACCCTCTTCACCCACCCCCATTCGAATCGGAGCATCTTCTCCGAAAGAACCCAGCGCCTTAGATCTCTCCGCCGTATCTCGACGTGgtgatttaatcaaaattcgaGTTTACGAGGACAAAGACAACGATCAAGACTTAAAAACGTGCATCAAAAGAAAGTTGCTCAACTATCACCATCAAATCGATGAagtttccaaagaaaaaaagccAACGTTAGAAATCAATTCAAATTCAGTACAAGACTCTGATCGGTCTACGCTACAAACCCTCGCCGATGTAGCCGTCAAACGGGTCACGTTGGAGAATACAAAGTTGGCGCAAAGTGTGGCCACCGAGTATTTAAAGTTGGCGACAAAAAATGAAACGGGAACAATTGTCGCGGCGGCTTCGGCAGTTGGCGGTGCGGCACCAGCCGGAATTGTCACGAACAATCCGGGTGCGACGTCGATTATAATCGAGCCAGTATCTTGCAATGGAGCGCCCAGTGTCGGCAGCAATAGTGATGGAGGTGGAATCAACGATTTGATTGTTAAGTCTGAGGAGAATAAAAGTTGTACGATATGTGCGAAAAACTTTAGCAAACCATCGCAGTTGCGgcTTCACATGAATATTCATTACATTGAAAGACCTTTCCGTTGTGAATCGTGTTCAGTGAGTTTTCGATCGAAAGGGCATTTACAGAAACACGAACGTAGTGCTAGTCATCATAATAAGTTGTCTTCATCGCCGACGACCAGCTCGTCCGAACCACGTCCGTTCAAGTGTTCCGATTGCAACATTGCATTCCGCATTCACGGACATTTAGCGAAACATTTACGCAGCAAAATGCATATCATGCGTTTGGAATGTTTGGCTCGTGTTCCCTTTGGCCTCTATGCAGAACTTGAGAGGGCAAATAGTTTGCTAACTGAAATCAACACCACCGACTGTGATATGTGCCTTGACAGTTTAAAAATTCTTGCTCGAAAACTTTTTAGTAATGATCCTAGTAAATTGGTACAAATAGAAAATCCGACTTCAATTAACAACTTGGCTTCATCCACCAATTCTCAACAGCAAGAAAATCAACAAATAACTGTTGGAAGTCCATAG
- Protein Sequence
- MENSTGAKYLHKKFKKPTPTTVTITKRCDDDEHQTNNNRLDLESKTSVSVLGAQQNDVLITSSSSTNSVNQQNDQVASISTSAASPTSPRQNDRLYANHEDDVDEEHRNLFTHSAPNNLANKLENFIDDKTCTNRSNSIVKPADQSNNNNISSSESDRSKINGIYSSHKWDSTTSSTLKPSVSTSSVFLSNSHNSEPSESDDKKNVVASEPGTGPSSVSGGLTATSTTGSSGGGKYVCSYCNLSCSKPSVLQKHIRAHTNERPYPCVSCGFSFKTRSNLYKHCRSRSHANRAKDSPESTANSTPSTATISTTIVTSTSTTTTTSNSTPTNQSIAPISNHINNENVMPKNKPYKPKFKLLSQQNRENEDKIEQKTPTASLQPATVTSDLVKQNPDLLNQHITNLIHKNQTILDVNESNYIKRRFICQQQLLQNDSVNSNDENQPFKAKTLYESNFNDEPLNLTARNRKRCMSETEHTQKSLIKELLLKNLSQDHSYVCQFCKISFKNIENFEIHRKNYCKVGENPTSKDIAFVRSHSVNVASVLTQKYSRNNESPTKFVRTTLPLKSPGPFLGKTSLVDSKVPQQQSVAVANTLPNPLVMPNQVFYENRNPTKIHRPVEDKSAKPSLNFVLPSPNDKRGNSDDFHAYNSSMLLKKQSQTPQVRLFGGEVKITNETSGETRSFKIDSSKNVNDFSAQHSPQYIYGNKISENMVVKSGLQSGGTILQNTPTYDTKSDDGKPMFQYYDSSSLHGKPEKRSLSQEHHSSPRFSFPDESLLSTSASSGSIYDQNMIDFTQKTAKMFAPNLKQPNLTIPGLPIPNKVFNSSPKNNFEPPANWSTTSCVTTLSITSPSSIIKFSQSQPKTSPPIKPTLSSDFDRNINAINASGVASQFRFLKPLHILVNGKLVPFIPGMPGPAEVSPTVVVPTMPPIGVVQANPNPSLLSPKVMKNDPPLFPEKQFIQKAPSSPISNAYLVDQPKLAESKIPDNQRKLLKSFRIKQSNGSSDDRKSDSNPITTVKEDVTVISEPTTSGLGSKFLRPNSLAIKPYIPMKTHHGLTPTMFNQALISPDTPRVAKKNCQLYLNGNCFSYLGLKSSTKPTYCTLNKTQPFYVQSFGKLSMYSAWRHLECKLDYVRLDTYDSRQRRQNYSVAKIKMPDLIVDSSYKSVLIENIDKKEETNNRSGLVLQGGYESNEDYTYIRGRGRGRYVCDQCGIRCKKPSMLKKHIRTHSDVRPYTCRHCNFSFKTKGNLTKHMKSKAHYKRTTSGVPNSPGVNGDNQPSQCSTPSDDDSDTDMENENDSDDSTRLQDHEAAHCLLSLAQNRSPNQVSNSVDSSETAEIANERLAITSSPDNTNLSETSSTSSVKSLSSTTSSSSMPVPTALDTMSSRKPLTYPYYKVQSKKPNTNGSSASSGSNDVETKPNIVLYTDVSSIFNQVILGEKNIELNHLESCISGVTNSVIVSGSGNAIASCNGVDDPRTKMVTTPTKIQFISDKLPNADVTIANFQQKFVKYEQQRAAIAAAAAAAAGSTDSVNGQEPKRLAITLPPLPESRRKMQEELLLHSRLTTQNVTAPAEPVIITTASVIRKVYDSSPIISYPTNQTKSPLSPMYKNRKRKLSYNVHEENMQSIDLSANKGIDLSTINREYDNHRITPNSLPPIPPSSPTPIRIGASSPKEPSALDLSAVSRRGDLIKIRVYEDKDNDQDLKTCIKRKLLNYHHQIDEVSKEKKPTLEINSNSVQDSDRSTLQTLADVAVKRVTLENTKLAQSVATEYLKLATKNETGTIVAAASAVGGAAPAGIVTNNPGATSIIIEPVSCNGAPSVGSNSDGGGINDLIVKSEENKSCTICAKNFSKPSQLRLHMNIHYIERPFRCESCSVSFRSKGHLQKHERSASHHNKLSSSPTTSSSEPRPFKCSDCNIAFRIHGHLAKHLRSKMHIMRLECLARVPFGLYAELERANSLLTEINTTDCDMCLDSLKILARKLFSNDPSKLVQIENPTSINNLASSTNSQQQENQQITVGSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01349132;
- 90% Identity
- -
- 80% Identity
- -