Basic Information

Insect: Sisyra terminalis
Gene Symbol: -
Assembly: GCA_958496175.1
Location: OY292279.1:10738969-10744798[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.42 28 5.6 0.1 2 23 7 28 6 28 0.96

2 13 3.3 2.1e+02 2.8 1.2 1 11 558 568 558 581 0.84

3 13 0.0021 0.14 12.9 0.7 1 23 684 706 684 706 0.99

4 13 7.6e-05 0.005 17.4 2.7 2 23 709 730 708 730 0.97

5 13 0.00066 0.043 14.5 1.1 1 23 736 758 736 758 0.95

6 13 0.00016 0.01 16.4 2.9 1 23 764 787 764 787 0.97

7 13 9.8e-06 0.00065 20.2 2.7 2 23 823 845 822 845 0.96

8 13 6.1 4e+02 2.0 1.6 2 23 861 881 860 881 0.94

9 13 1.9e-05 0.0013 19.3 1.0 1 20 887 906 887 909 0.92

10 13 0.00019 0.012 16.2 1.0 1 23 917 939 917 939 0.99

11 13 0.00048 0.032 14.9 6.8 1 23 945 967 945 967 0.98

12 13 2.2e-05 0.0015 19.1 3.2 1 23 973 995 973 995 0.99

13 13 0.0013 0.087 13.5 5.4 1 23 1001 1023 1001 1024 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.42	28	5.6	0.1	2	23	7	28	6	28	0.96
2	13	3.3	2.1e+02	2.8	1.2	1	11	558	568	558	581	0.84
3	13	0.0021	0.14	12.9	0.7	1	23	684	706	684	706	0.99
4	13	7.6e-05	0.005	17.4	2.7	2	23	709	730	708	730	0.97
5	13	0.00066	0.043	14.5	1.1	1	23	736	758	736	758	0.95
6	13	0.00016	0.01	16.4	2.9	1	23	764	787	764	787	0.97
7	13	9.8e-06	0.00065	20.2	2.7	2	23	823	845	822	845	0.96
8	13	6.1	4e+02	2.0	1.6	2	23	861	881	860	881	0.94
9	13	1.9e-05	0.0013	19.3	1.0	1	20	887	906	887	909	0.92
10	13	0.00019	0.012	16.2	1.0	1	23	917	939	917	939	0.99
11	13	0.00048	0.032	14.9	6.8	1	23	945	967	945	967	0.98
12	13	2.2e-05	0.0015	19.1	3.2	1	23	973	995	973	995	0.99
13	13	0.0013	0.087	13.5	5.4	1	23	1001	1023	1001	1024	0.96

Sequence Information

Coding Sequence: atgaaTTCATTGTATCAAATGTGCCCTGTGTGCACGTTGTATTTACGTTCGGGAATAAGTTTGGAGGAGCATTTGCAAACGCATGCTAAAGAAAAAGTCATTTCTGCATTAGCTTCTCTATGCCAAACAAACCAGTCGCCAAGTCCAGTGAAATATCAGCCAATTGCTCCATATATTCCCGCAGCAATCCCTCCATGGCAACAAAACCGGTTGGAAGTCATTCCTGGACAACCATTCATTATTGCAAATCAATCGAACAGCCAATCGATTTTTTATCAGCAAATTATGTCAAGCATCGCTACGCATGGGGTGCAAAATATGGTTGTGCCACAATTTGTGGCTCTTCCGAGCACTGAATTCAATCCTCTGGATCAACAACACTTAATTGCAACGCCTGCTATCCCCACATTGTATCAACAACGTCAAGAAGTACAAATTGTCAGTACAAATCCATTAGTAAATTCTGGTGGCAATGTAGAAATTCCACCAAACAATACAATTAAAAACACAACTACTACCACCGTTGTAACATCAACTGCAACAACTGCTAGTTCTGTGGATGATCAATCGAGTAAATCTCAAGAGTGTATTCTCCCAAAAATTGTTGAATCACTCAAGAAAAGTGACGACGAAAAAAGTACTTCACTAACAACAATTTGTCTTCCTGATATTACAATTACCGCCGGTAATTTTTCTAAAGATCAAAACAAATCTGAACAAATCGAACCAAAATCAAACGATTCCTATGGTCAAATGGAAGTGATTCCCATTTTCCATGTGAACGATGATACAAAAGAACTTAAAGTACAAGATGATGTAAAATCCCAAGCGACCGAAACCGATGCAATCGAAGAAAATTCTTTATCAATCGTAACTTACAATTCCGAAGAAACAATTCTGCCAGATATGGTTTACGCAGAACAGAACAAACAAAATAGCTTCTCCGTCAGTATAGTTAAAAGAGAATCGCCTGAGGAAAAATTTATCGAACATAACGAATCATCCGACAGTGTAATCTATGAAGGAACCAAAGCTAACCAAGACGCAGAAATCAAAGACGAAAAACCAATCAAGCTGGACACGGACGTTCGAATTCTACAAGAAAGATTAATCTTTTCACCACCCACTAAATTCGATGTAAAAAATGAACAAACCCGACCATCTACTTCGCAAGAAATCAAAGAGATGCTGAATGGAAAGTTGGAGGTGTCGAGTTTTTATACGATGGATTTAACCGTTGACGAGGATGCAAAGTTGAGTCAAACATCACCGGATCGACCCCAAAAAATAGTGCTCGACGATGACGATGAGGAGGATGATGATGATTCGTCCAGTAAAAATCGGAGTAAATTGTCCAGTGCCGTAAATATTGGAGAACTAATGGAGAATAGTAATCGATCGATAGATAATTTATATGAGAGCACGTCGAGGGATAGTTTGAATGTACGAACGGACGAAAAGATACCACCGAGGGGTGAGTTGTCGGAGCAGGAGAGCAACGGGGCCAGTGAACCGGGATGGAGTAGGacATTTCAAGAAGGCGCCAGTTCGGGGGTATCAACATCTTTCAATGGTTCTTTGGTAGCCCGTGAAACATGGGAAGTATCCGACGGTTCCGACACCGAAGTAACTCCTGAAACGACTCAAAACCCAAATCCACCAGCGATTGAATACCCGTGCCACCTATGCACGGAATCGTTTCCCTGTGGCAAATTGCGACGAGTTCACGTTAAGGATGTTCACAATGAAACTGTGTTATCCcctattaaaaacattaaaattgaacACACAATCACCAAAGTGAAAAAACCAGCAAACATGAAAAATCTTACAAAAGAAGAGCCCGCGGACATACCTGTAGAAAATTTTGACAATGTACTTTTGACCCCCAAAAAGGAGGAAACAAAACCGAATGTAACAGTTTCGTCGGTGTTGTTTTCCTGTCATTTTAATACGTTTAAATGTAACATTTGTGAGTTGCGTATGGAGTCGAAACGAGAatgtataaaacattttaagagAAGTCACCCGGGAACGCCAATTCCTGGTTATCAGTGTGTCACGTGTTACGCAACTTTTACAGTCGAATCAAAATATACAGAACATTTACGAGTTCATCCTCTCGAATGTCCTATTTGCTTCAAGCATTTCTATCGCCGAATTAATATGCGAATTCATATGAAACGACACGCTGATATAAAACCTTTCAAATGTGAGTTTTGTACGAAAAGTTTTATCACCCGACAAAAATTGGTTGAACATACCGCGGGTCATACCGGAAACACTCCGTTTAAATGTACAGCATGCCACGAGCCATTTCGTAGACAATCTGCATTGTTGAACCATCGAAACCGGTTTCATTTGGGAAAGAGAAAAACGAAAGATTATCGATGCCATTGCGGCGAGATTTGCCACtcgaaaaagaaatttttgtggCATAGTGAAATACACGACACCAAACCGAAATCGTGTACGTATTGCAATGAAAAGTTTGTTCATGCGTCGAGTTTGACGCGACACATACGGAATTCGCATAACAAAACCTATGTTCCGGATGAGAAACGGAAAGAAGAGAATGTGCAATGTGtgatttgtcaaaaaatttgcttaaaacaTTCGATCGATGCCCATATGAACATACACACTGGCATTAAATCTTTCGTTTGTAACATTTGTAATAAAGAATTCACGTCCAAGTGGAACCTAAAGTTGCATCGTTGGACTCATGCTGCCAGTACGTCAAAACCGTTCAAGTGCACCCAATGCAAAAGTGCATTCATTCGACAAACGGATTACGTTGCCCACATGAATTCTCACAAAAGCGTCCGTCCGTACACCTGCAACCATTGTGGCCGACAATTTATTCGTAAATACAACTGTCAACGTCACGTTCGTGAACACGAACGTGAAAAATCATTCAAATGCGACATTTGCCAAAAGCAATTCCATCGATCCTACTACTTAATCGAACATTTACGAATTCATAATGGAGCGCGACCATATACGTGCCACATATGCGGCAAAGCCTCCGCCACCAAATCCAATCACAACAAACACGTAAAAATCCATCATGCTCGCGAGCCCATCAGTactgaaaactaa
Protein Sequence: MNSLYQMCPVCTLYLRSGISLEEHLQTHAKEKVISALASLCQTNQSPSPVKYQPIAPYIPAAIPPWQQNRLEVIPGQPFIIANQSNSQSIFYQQIMSSIATHGVQNMVVPQFVALPSTEFNPLDQQHLIATPAIPTLYQQRQEVQIVSTNPLVNSGGNVEIPPNNTIKNTTTTTVVTSTATTASSVDDQSSKSQECILPKIVESLKKSDDEKSTSLTTICLPDITITAGNFSKDQNKSEQIEPKSNDSYGQMEVIPIFHVNDDTKELKVQDDVKSQATETDAIEENSLSIVTYNSEETILPDMVYAEQNKQNSFSVSIVKRESPEEKFIEHNESSDSVIYEGTKANQDAEIKDEKPIKLDTDVRILQERLIFSPPTKFDVKNEQTRPSTSQEIKEMLNGKLEVSSFYTMDLTVDEDAKLSQTSPDRPQKIVLDDDDEEDDDDSSSKNRSKLSSAVNIGELMENSNRSIDNLYESTSRDSLNVRTDEKIPPRGELSEQESNGASEPGWSRTFQEGASSGVSTSFNGSLVARETWEVSDGSDTEVTPETTQNPNPPAIEYPCHLCTESFPCGKLRRVHVKDVHNETVLSPIKNIKIEHTITKVKKPANMKNLTKEEPADIPVENFDNVLLTPKKEETKPNVTVSSVLFSCHFNTFKCNICELRMESKRECIKHFKRSHPGTPIPGYQCVTCYATFTVESKYTEHLRVHPLECPICFKHFYRRINMRIHMKRHADIKPFKCEFCTKSFITRQKLVEHTAGHTGNTPFKCTACHEPFRRQSALLNHRNRFHLGKRKTKDYRCHCGEICHSKKKFLWHSEIHDTKPKSCTYCNEKFVHASSLTRHIRNSHNKTYVPDEKRKEENVQCVICQKICLKHSIDAHMNIHTGIKSFVCNICNKEFTSKWNLKLHRWTHAASTSKPFKCTQCKSAFIRQTDYVAHMNSHKSVRPYTCNHCGRQFIRKYNCQRHVREHEREKSFKCDICQKQFHRSYYLIEHLRIHNGARPYTCHICGKASATKSNHNKHVKIHHAREPISTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -