Basic Information

Insect: Sisyra terminalis
Gene Symbol: -
Assembly: GCA_958496175.1
Location: OY292275.1:3114732-3121369[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00024 0.016 15.8 4.9 1 23 359 381 359 381 0.96

2 9 1.6e-05 0.0011 19.5 0.1 1 23 387 409 387 409 0.96

3 9 0.00036 0.024 15.3 3.1 1 23 415 437 415 437 0.96

4 9 6.3e-06 0.00042 20.8 1.2 1 23 443 465 443 465 0.97

5 9 0.00056 0.037 14.7 5.7 1 23 471 493 471 493 0.97

6 9 1.8e-06 0.00012 22.5 0.7 2 23 498 519 498 519 0.96

7 9 3.6e-05 0.0024 18.4 2.9 1 23 525 547 525 547 0.98

8 9 5.6e-07 3.7e-05 24.1 0.6 3 23 555 575 553 575 0.96

9 9 0.0009 0.059 14.0 3.7 1 23 581 604 581 604 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00024	0.016	15.8	4.9	1	23	359	381	359	381	0.96
2	9	1.6e-05	0.0011	19.5	0.1	1	23	387	409	387	409	0.96
3	9	0.00036	0.024	15.3	3.1	1	23	415	437	415	437	0.96
4	9	6.3e-06	0.00042	20.8	1.2	1	23	443	465	443	465	0.97
5	9	0.00056	0.037	14.7	5.7	1	23	471	493	471	493	0.97
6	9	1.8e-06	0.00012	22.5	0.7	2	23	498	519	498	519	0.96
7	9	3.6e-05	0.0024	18.4	2.9	1	23	525	547	525	547	0.98
8	9	5.6e-07	3.7e-05	24.1	0.6	3	23	555	575	553	575	0.96
9	9	0.0009	0.059	14.0	3.7	1	23	581	604	581	604	0.95

Sequence Information

Coding Sequence: ATGGTTTATAAATGGTGTGTGGTGTCTCAATGCACAAATACGTCGATAAAAACTCCACATAAACTATTTGTTTCGGTTCCCACGAATCCCGAAAGACGAAAATTGTGGTTACAATTGTCGGGAAGAGATCCAATGACAATTTTAACTCATACAAATGTTTTCATGTGTGAAGATCACTTTAATATTGAAAAAGATACAATTAATTATACAAAGTATAAAATGGGTTTTAGTAGAAACATACTGTTAGCGGATGAGGCTGTACCAACTAAGTTTTATTGTCAAGAAGATTGTAAAACACGGATGTCTGATGGGGAATCTTCTCATGAAATGTTTCTTAAACGGGAAAATATTAATCTTAGTACAGAGTATATGCAAATTCAAAATTCTTCTGAAATCTATAGTAAAAGTTTACAAGATGCTGAAGaatTATCAAAAGCTCAAAATAAAGACACCACCACCGAGCCTATCATAGCTGCAGAAAATTCAGTGCAAGTAACAGCGAAAaaaaaaagtacAATTATTAAATCCAGTAAAACGGAAAGCTGTTTGATTTGTTCCGGAATATATACATTAATGGTTTCCCTTCAAGAATGTTTAAGGGAATGTAATGGATTAACAGTGGCTCAAGTTCTAGAAAATTTGCATGTAAATATTGAAAGCATAGAGAAGAGCTTTTTGCAGCTTAATCTTTATTCTTTGCTCATAAAGATTGCAGATGCTGTCGATGTTAACGATAAGATTTGTTTCATTTGTGTGGCGAAAATTCATTCttgtttcaaattgaaaatgttatgtGATCAACTCAAATATGATCAAaggtttttcataaaagaagaAAACCACGAGGAAAGTAGTATAGAAGAGAGTGACGAAGGAAATTCAATCGGAAGTTATGGCATTGAAGAAAATTTCGTTGAAATGGAACACAAAGAATATGTAAATGTACCAAGTGCATTACCTGTTACGAATGTGTTTATCAAAGAACCAAATTTCACAAGTGATCTTCCTGTTAAAATAGAAGTTGAGGAGACGTTACACgttaaaaaagaaaaaccaatttcaacttcaaaatcatttttctgtCATATTTGTTctAAATCATATTCTACCCGAAACTATTTTAATAAACATCAAGTTATTCACAGTGGTGAAAAGCCTCATGTGTGTGGTTTATGTaatGCAGCTTTTACGGATGCTAGTAACTTACGTCGGCATGAAATAGTTCATACCGGAATGAAAAAGCATacttgtgatgtttgtaatatgtCATTTGGTCATTCCAGTACACTAGCAAAACACAAAACGATTCATAGTGATCAGAAGCCATATGTTTGTGATATTTGTAatagaCCATTTAAGCGTTTATCATACTTAAGGACACATAAATACGTTCATTCCCGTCTAAAACCTCATGTTTGCGATGTTTGCAatttatcATTTAAGAGTCCCTGTCATTTATCTCGACATAAACTAATGCATAAAGAACCGAATGTGTGTGATATTTGTGATAAATCATTTTCCCATCCGGATTATTTAAATCAACATAAATTGATTCATGCAGAAAATAAAACACATGTGTGCGATATTTGTAataaatcatttactaTCGCTCGCTATTTAAGACAACACAAAAAAACCCACATAAATCGAAGACCGTGGGCATGCGATATTTGTGataaaaaatttaaatatcctAGCGAATTAAAGAAGCATAAATTAACTCATTCGTTAAAAAAACGGCACGactgtgatgtttgtaaaaaatcttttaaagttTCCACTGATTTGAttgatcataaaaaaatttgtcataCCGAAAAATCGGAACCAACATAa
Protein Sequence: MVYKWCVVSQCTNTSIKTPHKLFVSVPTNPERRKLWLQLSGRDPMTILTHTNVFMCEDHFNIEKDTINYTKYKMGFSRNILLADEAVPTKFYCQEDCKTRMSDGESSHEMFLKRENINLSTEYMQIQNSSEIYSKSLQDAEELSKAQNKDTTTEPIIAAENSVQVTAKKKSTIIKSSKTESCLICSGIYTLMVSLQECLRECNGLTVAQVLENLHVNIESIEKSFLQLNLYSLLIKIADAVDVNDKICFICVAKIHSCFKLKMLCDQLKYDQRFFIKEENHEESSIEESDEGNSIGSYGIEENFVEMEHKEYVNVPSALPVTNVFIKEPNFTSDLPVKIEVEETLHVKKEKPISTSKSFFCHICSKSYSTRNYFNKHQVIHSGEKPHVCGLCNAAFTDASNLRRHEIVHTGMKKHTCDVCNMSFGHSSTLAKHKTIHSDQKPYVCDICNRPFKRLSYLRTHKYVHSRLKPHVCDVCNLSFKSPCHLSRHKLMHKEPNVCDICDKSFSHPDYLNQHKLIHAENKTHVCDICNKSFTIARYLRQHKKTHINRRPWACDICDKKFKYPSELKKHKLTHSLKKRHDCDVCKKSFKVSTDLIDHKKICHTEKSEPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -