Basic Information

Insect: Sisyra terminalis
Gene Symbol: -
Assembly: GCA_958496175.1
Location: OY292279.1:44588353-44599612[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8.4e-07 5.5e-05 23.6 2.0 1 23 109 131 109 131 0.99

2 11 8.3e-07 5.5e-05 23.6 1.7 1 23 137 159 137 159 0.99

3 11 1.2e-06 8e-05 23.1 1.5 1 23 165 187 165 187 0.98

4 11 0.00046 0.03 14.9 2.0 1 23 193 215 193 215 0.98

5 11 0.0006 0.04 14.6 0.9 1 23 221 243 221 243 0.96

6 11 4.7e-05 0.0031 18.1 0.6 1 23 377 399 377 399 0.98

7 11 1.1e-05 0.00072 20.1 2.1 1 23 560 582 560 582 0.97

8 11 5.4e-06 0.00036 21.0 2.1 1 23 588 610 588 610 0.98

9 11 0.0056 0.37 11.5 3.4 1 23 616 638 616 638 0.97

10 11 2.6e-07 1.7e-05 25.2 0.8 1 23 644 666 644 666 0.97

11 11 0.00022 0.015 15.9 0.5 3 23 674 694 672 694 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8.4e-07	5.5e-05	23.6	2.0	1	23	109	131	109	131	0.99
2	11	8.3e-07	5.5e-05	23.6	1.7	1	23	137	159	137	159	0.99
3	11	1.2e-06	8e-05	23.1	1.5	1	23	165	187	165	187	0.98
4	11	0.00046	0.03	14.9	2.0	1	23	193	215	193	215	0.98
5	11	0.0006	0.04	14.6	0.9	1	23	221	243	221	243	0.96
6	11	4.7e-05	0.0031	18.1	0.6	1	23	377	399	377	399	0.98
7	11	1.1e-05	0.00072	20.1	2.1	1	23	560	582	560	582	0.97
8	11	5.4e-06	0.00036	21.0	2.1	1	23	588	610	588	610	0.98
9	11	0.0056	0.37	11.5	3.4	1	23	616	638	616	638	0.97
10	11	2.6e-07	1.7e-05	25.2	0.8	1	23	644	666	644	666	0.97
11	11	0.00022	0.015	15.9	0.5	3	23	674	694	672	694	0.97

Sequence Information

Coding Sequence: ATGGAAAACGAATTGGAAACCGGAAATGCATTCAGTGGATCATCCAAAGTTTCACCATTTCTACCAgaaaattgcattgaaaatgATAATCTTAGCAAATCATGCACAATTGTGGAAGACAAACGGGAAATGGATAttgaagatataaaaaatatatcaacaaataTTGCCACTGTAAGACCAGAAACGAATCCAGAAGATGGCTGTGAAATAAAATCCGAAATTGAAAttgtcgaaaatatttttaaaatcgaaaatgatGAATCATTCAATCGGTCAATTAGCCTTGATTCTAATGAGCAGAAGAGTATTGGAAATAATTCctatgtttgtgatgtttgcaacAAATCGTTTTCACAATCAACCTCTTACGTACGACATAAAAGAACTCACACTGGTGAAAGGCCGTACgtatgtgatgtttgtaACAAATCGTTTTCACAATCAAATAATTATGTGCAACATAAACGTACCCACACTGGTGAGAAGCCTTATgcatgtgatgtttgtaacAAGACATTTTCGCGTTTACAATATTTAGCCAAACATAAACGAACTCACGTTGGTGAGAAGTCTTACGCatgtgatgtttgtgaCAAATCATTTGCATGTCGCCAAAATTTTACGGCACATAAACGAATTCACACTGGTGAACGGCCCCACgtatgtgatgtttgtaACAAGTCATTTTTACGTCGAATTAATTTAGTACGACATAAAGCAATTCACACTGGGGAGAGGCCATACgcatgtgatgTTCCCAATTTGGAAAAACTTGATCGAGTTTTGTGTTATATTTGTGTgggaaaacttaaattttgtttCGATTTTAAAACGCAATGTtatcaaatagaaataaaattggaaaccGAAAGTGCATTGAGGGGATCATCCGAGCTTTCCCCATTGCCACCACCAAATAATATAACACCTGACACTATTCCTAATGAAGAAGCCCTTGAAGACAATAACGTTAATGATTTCGACACCAAAGTGAAAAATACATTGACCCATTCTTCGGAAATGGTGCcacaagaaaaaagtattttaccATTGAAAAAAGAGCAATCATTTACTCGACCAAATGACACAGCTTCTAATCAAATAATTCGGCCGGGTTATAAGTCACacgtgtgtgatgtttgtaACAAAGCATTTATACTCTCAATTGATTTAGTACGCCATAAACGAACTCATTCGGGTGAAAGACCAttcatTTCTGATTTGGAAAGACTTGGTCCAGTTTTGTGTTTCATTTGTGTGGCAAAAGTGCAATCGTGTTTCGATTTTAAATCGCAATGTTACCAAATAGGGAAACAATTGGACTCCGAAAATGTATTCATTGAGTCGTCGGAGGTTGCATCATTGCTTCCAGAAGATGATATGAGCCCCAATACCATTAACAATGATCCACTCGATGAAAATTCCACTGCCAATGATAATCTTGGCGAATTATGCGAAATTGGGAAAATCAAAGAGGAAATCAATGCTGCAGAAATCGAAAATATCGTAACAAATATACAATGTGTCATCCCCGAAACGAGTGCAACAATAAGTTGTGAAACAAAAGCTGAACTCgacattgttgaaaatattgcattaGTAAAAAATGATGAATCATTGACTCGGTCAACTGGCATTGATTCTAATGAGCATAAGGGTAAAGGAAATAATTCccatgtttgtgatgtttgtaacaAATCATTTATGCGTTCCGAATATTTAGTTAAACATAAACGAATTCACATTGGTGTAAGGCCATACGTgtgcgatgtttgtaacAAATCTTTTATGCGTTCcgaatatttatataaacataAACGAAGTCACACTGGTGAAAAGCCTTACgtatgtgatgtttgtaGCAAATCATTTTCATGTTTAAGTAGTTTTAAGTTACATAAACGAGGGCATGCTGGTGATAAGCCGTACGCCTGTCATATTTGTGagaaatcATTTGTCCGATCTGCTAATTTAAAACAACATTTATTGATTCATTCCAAAGAAAAACTATATTGgtgcgatgtttgtaataaaGCATTCCGTCTTTCATATTATTTGATGCGACATAAATCAATTCATAGCATGCCAAAGGCTGGGCAATAG
Protein Sequence: MENELETGNAFSGSSKVSPFLPENCIENDNLSKSCTIVEDKREMDIEDIKNISTNIATVRPETNPEDGCEIKSEIEIVENIFKIENDESFNRSISLDSNEQKSIGNNSYVCDVCNKSFSQSTSYVRHKRTHTGERPYVCDVCNKSFSQSNNYVQHKRTHTGEKPYACDVCNKTFSRLQYLAKHKRTHVGEKSYACDVCDKSFACRQNFTAHKRIHTGERPHVCDVCNKSFLRRINLVRHKAIHTGERPYACDVPNLEKLDRVLCYICVGKLKFCFDFKTQCYQIEIKLETESALRGSSELSPLPPPNNITPDTIPNEEALEDNNVNDFDTKVKNTLTHSSEMVPQEKSILPLKKEQSFTRPNDTASNQIIRPGYKSHVCDVCNKAFILSIDLVRHKRTHSGERPFISDLERLGPVLCFICVAKVQSCFDFKSQCYQIGKQLDSENVFIESSEVASLLPEDDMSPNTINNDPLDENSTANDNLGELCEIGKIKEEINAAEIENIVTNIQCVIPETSATISCETKAELDIVENIALVKNDESLTRSTGIDSNEHKGKGNNSHVCDVCNKSFMRSEYLVKHKRIHIGVRPYVCDVCNKSFMRSEYLYKHKRSHTGEKPYVCDVCSKSFSCLSSFKLHKRGHAGDKPYACHICEKSFVRSANLKQHLLIHSKEKLYWCDVCNKAFRLSYYLMRHKSIHSMPKAGQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -