Basic Information

Insect: Sisyra terminalis
Gene Symbol: ZNF236_1
Assembly: GCA_958496175.1
Location: OY292275.1:40486010-40493394[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0035 0.23 12.2 1.0 2 23 34 55 34 55 0.94

2 20 0.00072 0.047 14.3 1.3 1 23 61 83 61 83 0.96

3 20 4.5e-05 0.003 18.1 0.7 2 23 88 109 88 109 0.97

4 20 0.0019 0.13 13.0 0.2 1 23 115 137 115 137 0.95

5 20 0.00097 0.064 13.9 3.4 1 23 148 171 148 171 0.96

6 20 0.0057 0.37 11.5 3.8 1 23 194 216 194 216 0.93

7 20 6.6e-07 4.4e-05 23.9 1.1 1 23 222 244 222 244 0.99

8 20 7.4e-06 0.00049 20.6 0.7 1 23 250 273 250 273 0.95

9 20 8.7e-05 0.0057 17.2 0.9 2 23 283 305 282 305 0.96

10 20 5.3e-06 0.00035 21.0 2.8 1 23 389 411 389 411 0.98

11 20 5.3e-07 3.5e-05 24.2 0.9 1 23 417 439 417 439 0.99

12 20 0.00022 0.014 16.0 3.6 1 23 455 477 455 477 0.98

13 20 8.1e-05 0.0053 17.3 0.5 1 23 524 546 524 546 0.98

14 20 1.2 79 4.2 5.6 1 23 552 575 552 575 0.82

15 20 9.5e-05 0.0062 17.1 6.5 1 23 581 603 581 603 0.97

16 20 0.00041 0.027 15.1 4.7 1 23 609 631 609 631 0.98

17 20 1.6e-06 0.0001 22.7 2.4 2 23 822 843 822 843 0.97

18 20 6.8e-05 0.0045 17.6 3.2 1 23 849 871 849 871 0.98

19 20 3.1e-06 0.00021 21.8 0.8 3 23 880 900 879 900 0.98

20 20 0.0064 0.42 11.4 7.9 1 23 906 928 906 928 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0035	0.23	12.2	1.0	2	23	34	55	34	55	0.94
2	20	0.00072	0.047	14.3	1.3	1	23	61	83	61	83	0.96
3	20	4.5e-05	0.003	18.1	0.7	2	23	88	109	88	109	0.97
4	20	0.0019	0.13	13.0	0.2	1	23	115	137	115	137	0.95
5	20	0.00097	0.064	13.9	3.4	1	23	148	171	148	171	0.96
6	20	0.0057	0.37	11.5	3.8	1	23	194	216	194	216	0.93
7	20	6.6e-07	4.4e-05	23.9	1.1	1	23	222	244	222	244	0.99
8	20	7.4e-06	0.00049	20.6	0.7	1	23	250	273	250	273	0.95
9	20	8.7e-05	0.0057	17.2	0.9	2	23	283	305	282	305	0.96
10	20	5.3e-06	0.00035	21.0	2.8	1	23	389	411	389	411	0.98
11	20	5.3e-07	3.5e-05	24.2	0.9	1	23	417	439	417	439	0.99
12	20	0.00022	0.014	16.0	3.6	1	23	455	477	455	477	0.98
13	20	8.1e-05	0.0053	17.3	0.5	1	23	524	546	524	546	0.98
14	20	1.2	79	4.2	5.6	1	23	552	575	552	575	0.82
15	20	9.5e-05	0.0062	17.1	6.5	1	23	581	603	581	603	0.97
16	20	0.00041	0.027	15.1	4.7	1	23	609	631	609	631	0.98
17	20	1.6e-06	0.0001	22.7	2.4	2	23	822	843	822	843	0.97
18	20	6.8e-05	0.0045	17.6	3.2	1	23	849	871	849	871	0.98
19	20	3.1e-06	0.00021	21.8	0.8	3	23	880	900	879	900	0.98
20	20	0.0064	0.42	11.4	7.9	1	23	906	928	906	928	0.97

Sequence Information

Coding Sequence: atgaattttatcgACAAGGATTTGATTATGTCCTACTCGAATCCACAGGATGTACTGGAGAATATAGAAACGGAGACCATCGATGTTGATGAAGGAAATGTTTGCTCATACTGCAAGCAagaatttaattcttttagaGCTCTAAAGCGACATGAAATCAACCATTTAGTTGATAAACCGCATAAGTGTAACAAATGTTCGGCATCTTTTAATGTCgaaagcaatttaaatttacacAAAGCTATTCATTCAGGAGAGGCCAAATGCCCTAATTGTCATAAAATATTCTCTCGTATAGCCAGTTTAAGAGCTCATTTGATTCTTCATGAGGTTGATGAAAGTTTTTTATGTACGGAATGCGAATATCCTTTCGATACATtgTTGCAGTTGGAATTACATATGCAAAATCACACTAAACCTAAAGAAGCAGGCAAAAAGATATTTATGTGCAGAATTTGTCGCCAAACATTTTCAActaatgttaaatataaaacgCACATGCAGCAATTTCATAAagtACGTCGATTTAAAGTCAATAGACCGCCGGTTGAATCacaaaaatctaaattaaaaagaattcatCAGTGTTCTCATTGTCctcgaaattttcaaaaattgagcCAATTAGTTAGACATGATAGAATTCATACAGGCGAAAAACCTTTTAAGtgttCAATATGCCAACGTGCCTTTTCTCAAAATAATACTCTCAAAATTCATATGATAACACATACAGGTGATCGACCATTTAAATGTCCACATTGTTCTGCAGCATTTACTCAAAAAGgtaaTCTAACTATTCATTTAGTTCGATTACATTCATCTGAAAACGGAGGTATAATGTTACCGTGTAACGAATGTAGTTGCACTTTTCGAAAATTAAGTGCTTTAAATGCTCATATCAATCGAGTTCACGGAAATGTTGAAATGAATTTACAGGATGTGCTAAATGCAATACATTCCTTAAACTCAACGTTTGATCCACTCAAGataaatgaaacgcataatcgGACTAACGTTCAAGAAGAAATAGTACAGGAATCTGGAAACATAGTATCAAATCATACATCTTCCATAAAATCAATCGCAATTGCCGATTGTCCAGAAGTTGGAGTCTTACGAAGACATTCAGTCAAAATGCGAGTAGCAGGTAGAACCAGGTGGCATCAATGCGTTTTTTGTACCAAAGAGTTCAAAAAACCTTCAGATCTTATTCGACATCTTCGCACTCATACCAAAGAAAAACCATATAGAtgttcCATTTGTAACAGAAGTTTTGCCGTGAAATCTACATTAACATCACATTTGAGAGTACATAATGAAATTGATAAAGCGAATCAATCTGCAAAaaaaacgaCAAATTTTTCGTGTTCCAAATGCAAAAAGAAATATAGGACATTAGAACAGTTGGAATTGCATACAAAAAGGCACGATATCGATTcagtacaaaatattttaccttcCATAGAATTAGAAGATCCAATTTTCATATCGGATGAAGgACTTTTGAAACCTTGCATATCTCCAAGAAAGCAACTATTAGCTGAAGCTGGTACCGAATTACGACCTTACGTTTGCTCCGTCTGTGGTGCAGGTTTCCGAAAGTATAGTTATTTGAAACAACACAAACTCATACACACCGATGAAAGACCATATTCATGTTCTATATGCCAAAAaaattttaaatcgcattatattttaagttgTCATATGACAAGAACTCATACAAAAAATAGGCTTCATAAGTGCAAAGAATGttcaaaatcttttaaaacTGCTATTTGTTTACAAAGGCATATGACTCAACATAGTAATAAGCGGCCATTTATGTGTCCATATtgtaagaaaacttttaaagctAAATGGAGCTGTAGAAAACATATGCGTAtccataaaattgaaattgcttTAAAGattaatgAAGATAAAAGTAATCCTGAAACAAGTACAACATTTCCAGAAACTATCAATGACGTAAATGATGAAATTCTTACAGATGCAATagtcgaTATGCAATTTTCCAATGTGATAACAGACGAAGTATCCAACAATCAACTGATAAATACTTTGGTTGTAGCCGTAAATGAAGAGTCTAAGACACAAAATGAAGTTTTGAATTCATCCCAACCATTTACATTGATATATTCATTAAGAGATTCGAATGATCAAgCCAACATTACTGAAATACAAGACGTAATATGGTCAAACAATGAACCACTAGGTTCAACATGTAAATTACTCGGTCCTTTGAATACTAATTTTAATACAATCCAACCAGTAACTGAATCCACAGATCCTGCAGAGAGCTTAGAGCAAATATTGAAACATCAAACTATGGAAAAAGATGATATTAATGTAAATTCCAAAACTgcaaaagagaagaaaaaaacatcaaattcaAGTAAATCACAGAATACCGCAGAcgcaaaatcaataaaaaaagcaatcgcaaaaagtaaaaatgtgTGTCACTAttgtaaaaaatctttttataaacCATCTGATCTTATTCGTCATACTCGTATTCATACCGGAGAAAAGCCATTTCATTGTAACATTTGCGAAAAAAGTTTTACATTGTTGTCAACATTACGAAGTCATACCAAAGTACATAACGTAAATAAAACCGAAGTGTTCTGCAATGTATGTGAAAAAGGTTTCAGTACAAAAGGAAGTTTGAAAATCCACATGCGACTACATAcaggAAGTAAACCTTTCCAATGTCATTACTGTGATTTGCGTTTTCGTACATCTGGCCATCGACAATCTCATCATCAAGCACACATTAACGAAGCAGTACGAAAAAACGTCCATCCTTCTGAAACTGTTACAAAAACACATAATTCTTGCGtaggaaaaattcaaaaatatttcaatagtgTGAAAATGGAGGGCATTGAGGAAAATGTAAGCTATAAAGTTTAG
Protein Sequence: MNFIDKDLIMSYSNPQDVLENIETETIDVDEGNVCSYCKQEFNSFRALKRHEINHLVDKPHKCNKCSASFNVESNLNLHKAIHSGEAKCPNCHKIFSRIASLRAHLILHEVDESFLCTECEYPFDTLLQLELHMQNHTKPKEAGKKIFMCRICRQTFSTNVKYKTHMQQFHKVRRFKVNRPPVESQKSKLKRIHQCSHCPRNFQKLSQLVRHDRIHTGEKPFKCSICQRAFSQNNTLKIHMITHTGDRPFKCPHCSAAFTQKGNLTIHLVRLHSSENGGIMLPCNECSCTFRKLSALNAHINRVHGNVEMNLQDVLNAIHSLNSTFDPLKINETHNRTNVQEEIVQESGNIVSNHTSSIKSIAIADCPEVGVLRRHSVKMRVAGRTRWHQCVFCTKEFKKPSDLIRHLRTHTKEKPYRCSICNRSFAVKSTLTSHLRVHNEIDKANQSAKKTTNFSCSKCKKKYRTLEQLELHTKRHDIDSVQNILPSIELEDPIFISDEGLLKPCISPRKQLLAEAGTELRPYVCSVCGAGFRKYSYLKQHKLIHTDERPYSCSICQKNFKSHYILSCHMTRTHTKNRLHKCKECSKSFKTAICLQRHMTQHSNKRPFMCPYCKKTFKAKWSCRKHMRIHKIEIALKINEDKSNPETSTTFPETINDVNDEILTDAIVDMQFSNVITDEVSNNQLINTLVVAVNEESKTQNEVLNSSQPFTLIYSLRDSNDQANITEIQDVIWSNNEPLGSTCKLLGPLNTNFNTIQPVTESTDPAESLEQILKHQTMEKDDINVNSKTAKEKKKTSNSSKSQNTADAKSIKKAIAKSKNVCHYCKKSFYKPSDLIRHTRIHTGEKPFHCNICEKSFTLLSTLRSHTKVHNVNKTEVFCNVCEKGFSTKGSLKIHMRLHTGSKPFQCHYCDLRFRTSGHRQSHHQAHINEAVRKNVHPSETVTKTHNSCVGKIQKYFNSVKMEGIEENVSYKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -