Basic Information

Insect: Sisyra terminalis
Gene Symbol: -
Assembly: GCA_958496175.1
Location: OY292274.1:33240178-33249962[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0023 0.15 12.8 0.5 1 21 76 96 76 100 0.91

2 25 0.063 4.1 8.2 0.3 1 21 113 133 113 134 0.92

3 25 0.0067 0.44 11.3 2.4 1 23 197 220 197 220 0.97

4 25 1.9e-05 0.0013 19.3 1.9 1 23 239 262 239 262 0.96

5 25 0.27 18 6.3 4.8 1 23 296 318 296 318 0.98

6 25 2.8e-06 0.00019 21.9 2.3 1 23 324 347 324 347 0.95

7 25 0.0012 0.077 13.7 3.0 1 23 353 375 353 375 0.97

8 25 3.6e-05 0.0024 18.4 2.3 1 23 381 403 381 403 0.94

9 25 0.00018 0.012 16.3 0.2 1 19 409 427 409 428 0.96

10 25 1.2e-05 0.00076 20.0 1.4 1 23 437 459 437 459 0.98

11 25 1.6e-05 0.0011 19.5 0.2 2 23 466 487 465 487 0.97

12 25 0.001 0.069 13.8 0.2 1 23 584 606 584 606 0.96

13 25 0.0013 0.088 13.5 0.4 3 23 646 666 645 666 0.92

14 25 0.0007 0.046 14.4 0.7 2 23 671 693 670 693 0.95

15 25 0.0045 0.3 11.8 1.6 3 23 700 721 698 721 0.96

16 25 0.43 28 5.6 0.2 2 23 723 744 722 744 0.95

17 25 4e-06 0.00026 21.4 1.2 1 23 756 779 756 779 0.93

18 25 0.0012 0.076 13.7 1.2 1 23 788 810 788 810 0.97

19 25 2e-06 0.00013 22.4 0.9 2 23 817 838 816 838 0.97

20 25 3 2e+02 3.0 2.0 3 23 844 864 842 864 0.95

21 25 0.055 3.6 8.4 0.2 2 23 880 903 879 903 0.95

22 25 0.00078 0.051 14.2 6.8 1 23 909 931 909 932 0.94

23 25 4.5e-05 0.003 18.1 1.0 2 23 937 958 936 958 0.96

24 25 0.072 4.7 8.0 1.4 1 23 964 986 964 986 0.97

25 25 1.3e-06 8.7e-05 23.0 0.4 1 23 992 1014 992 1014 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0023	0.15	12.8	0.5	1	21	76	96	76	100	0.91
2	25	0.063	4.1	8.2	0.3	1	21	113	133	113	134	0.92
3	25	0.0067	0.44	11.3	2.4	1	23	197	220	197	220	0.97
4	25	1.9e-05	0.0013	19.3	1.9	1	23	239	262	239	262	0.96
5	25	0.27	18	6.3	4.8	1	23	296	318	296	318	0.98
6	25	2.8e-06	0.00019	21.9	2.3	1	23	324	347	324	347	0.95
7	25	0.0012	0.077	13.7	3.0	1	23	353	375	353	375	0.97
8	25	3.6e-05	0.0024	18.4	2.3	1	23	381	403	381	403	0.94
9	25	0.00018	0.012	16.3	0.2	1	19	409	427	409	428	0.96
10	25	1.2e-05	0.00076	20.0	1.4	1	23	437	459	437	459	0.98
11	25	1.6e-05	0.0011	19.5	0.2	2	23	466	487	465	487	0.97
12	25	0.001	0.069	13.8	0.2	1	23	584	606	584	606	0.96
13	25	0.0013	0.088	13.5	0.4	3	23	646	666	645	666	0.92
14	25	0.0007	0.046	14.4	0.7	2	23	671	693	670	693	0.95
15	25	0.0045	0.3	11.8	1.6	3	23	700	721	698	721	0.96
16	25	0.43	28	5.6	0.2	2	23	723	744	722	744	0.95
17	25	4e-06	0.00026	21.4	1.2	1	23	756	779	756	779	0.93
18	25	0.0012	0.076	13.7	1.2	1	23	788	810	788	810	0.97
19	25	2e-06	0.00013	22.4	0.9	2	23	817	838	816	838	0.97
20	25	3	2e+02	3.0	2.0	3	23	844	864	842	864	0.95
21	25	0.055	3.6	8.4	0.2	2	23	880	903	879	903	0.95
22	25	0.00078	0.051	14.2	6.8	1	23	909	931	909	932	0.94
23	25	4.5e-05	0.003	18.1	1.0	2	23	937	958	936	958	0.96
24	25	0.072	4.7	8.0	1.4	1	23	964	986	964	986	0.97
25	25	1.3e-06	8.7e-05	23.0	0.4	1	23	992	1014	992	1014	0.98

Sequence Information

Coding Sequence: ATGGACTTCACCTCTTTAAGAGGAAGTTTATTTTACAGATTAAATGCAGCAGTCAACTTTACATCATTTTACAATGCTCAAAAATCATCACCCGCTTCTCCCGGAGTAAAAAAAGAATCTGAATACATTACAGAAACTATTTACATGTTAAAACCAGATAACAGTGGCAATACTTCAGATGAAAACGATGATATTCCATTAAGCAAGCGTGCTGcagtaaaaaaatatgcttGTGGTACATGTTATGAAAACTTCAAAACAAAAAGCAGTTTATTAAGTCATTTATCTGCAACGTTGCACAAAGCAAGACGTGGTCGTGTAGGTGTTATTAACAGATATTATTGTGATAATTGCGATTACGGCTTTAGTGAACTAAATGAAATGGAGGAACATAAACAAAAATGtcgattaactttttttccaatCAATGAGGACGAGTTACCTCAAGACACACTGGCTTTGGCAGCTGCTGGAATACTTAAATCAGAAATAGACATTAAAGATGAAATGATCaaagaagaaaatcaaatagAAAACGAAAATCCGGCACCTCCCAACAATGAAAATGCTGATGAAATTAATGACAAATATAAATGTTCAAAGtgtctttttaaatttcctctAAAAGCTGATTTAACCCGGCATTTCAGATTGAGGCATATagataaaaatgacaaaaatcatcGTCGaagaaaatctgaaataatacCGCAATATTATTGTGATGTATGTCCCAAAGGGTTTACTCGTCGATATGATATGCAAAAACATCGTAAGCAATCCCATCCTGATGTTCTCGAAAAAGATAGTTCCATAAAAACTAAAGCTCAGATGAACGCTGAACTTTTAGCTCGTTGTAGGGTGGAGTTCGAAGGAAAAACGCATTACAAATGTGAACATTGTAGTCGTATAATACATTTGTCGTATAATTTTTTGAGACATCAAACTATACATACTGGAGTACGGGCTTTCTTTTGCCATTTATGTGGCAAAAGTTTTCGAATGTCTAGTGGATTGAATCGTCACATCAAAGAACTTCATTATGGAGTTAAAAACCATTCTTGTGATATTTGTGGAAGGTGTTTCGCATCTAAAAATACTCGTGACGATCACATGAATATACACACCGGTGCAAGACCATTTATTTGTGATCAGTGCGGAAAGTCGTTCAAGCAAAAAGCCTCGTTACatgttcataaaatatttcataccaATGATAAACCTTTCATTTGTCGTACTTGTGGTAAACGTTTTCGTAGAGCAACAGAATTGAAAGTTCACGGATGGTTACATACAGGATATAAACCTCATGAATGTCCAATATGTGGTAGCAGATTCCGATTAGCGCAAGACCTCAAACGCCACCAAAAAACACACAGCAAAGACTACCAAGTTGAATGTGAAGAATGTGGTGCTCGTTTCGGACAAGCTCGATATCTTAAGAGTCACATGAAAACTCACCGTAAAAAAGAAATAACCAGAGAAATGAATGAACTACTCATAACAATTGATAAataCCAAGAGGTTTCTTCCAGAACACAGCCACCTGATCTACAAAAAGTTGAACACGACGCTGCTATGTTTGATTCGCCACCTACATCACCAAATACAGAGGTAGAATATATAAACATAATTACCGAACCAGCCATTGACGACATTAATGCAGTAAATACACGAGGAAATGTTCAAATAATCAAAATCGATATGCCTGTTGAAATTAATAAACCAAAAAAGTTTCATTCTTCCATATATTTGTGCCAAAAATGTGACACAGCGTTTGCGACTAACCTGGATTTTGAAATACATTTAGAGACACATGAGAATTTTTCCACGGAGGAAAAGATGCCCGAAGTAATTGGACAGACAGAATGTCACATAAATATAGAGACTAATGATAAACTGAATAATATctattcaaaagaaattaaaaatatttgtcctaTATGCTTAGTTACGTTCAAAAAGAAATCGGAATTAATGAGACATAATTCTGAACATCCGTTGATTATTCAATGTgataagtgtaataaaaaattttccgaTGATAAATTTCTAGAAATTCATGTAAGAGATAATCACTCTAAAGCTGTACTCGATTGCAAATATTGCCtcaataaattttctacaaagtTACTTCTCAATAATCATCTTAGAAGTCAGCATGTTGTATGTGAAATTTGTTTCATCAAATGTGAATCGGTCGTGGCACTTAAGGCTCATAGTCGTGGTCATGTAgagaaaaaatctaataaacttgaaaaattatatccttGCGACAAATGTAGTAAATCATTTCGATCTAAATCGGGACTTGAGCGGCATTTAGAATTTAACCATGGCCTCAAAGCTTTACCTCATCTTTTCTACTGTACATTGTGCTCTCTTTCTTTTAACAATGAGACTCTATTGAAATATCACATTTTAAATCATGACACAGCTCCAGATTTAACGTGTGAAATTTGCTTTAAGAAATTCAATCGTATTAGTAATTTAAATGCTCACATAAAAACACATGTTAAAGATATTTTCTGTAAAGTGTGCTGTTCCAGCTTTATATCACAATTTCGTTTAGAAAATCATCTATCAATACATACTGATGCTGAAATTGTAGACTGCGAAAGACTTCCAAATAGTATTGAGTGTCCATTTGAAAATTGTGGTCAAATATTCCCATCTCGTTTACAAATGTATAATCacaaaaaagttcatctaaacATTGTAGAACATTGTTGTTCTGATTGTGATCGAAAATTCAAGACTATATCAGAGTTAGCGACACATAGAAAAATTCACCATGAAAGCGATACATACTGCTACACTTGCGGAAAACAGTTTTCTACTATAAAAACTTTACGAGAACATATTCGTGTTCATACAGGAGAAAAACCATTTGAATGCGACGTTTGTAAAACTCAATTTCGGTGTCAAAGTAGTATGGTAGCACACCGTGCTATTCATAGTACAGAACGTAGATATATGTGTGGAATCTGTAAAAGAACATTCGCTCGTGCTGCCTACTTGAAAGAACATCTTCGAACACATCGTGAAGAGCGCCCATTTAGTTTTGATTTGAAGAGGCGTTTAATGAAAACTCCAGCGAATTTAAATCACTTAGAACCTTCTCTCCCAATGTACCACTCACTTCTATGCCAAAATTTTCTGGACCATTTTTATGATCAAAACTACGCTGAAAATTGGTTAAATTAA
Protein Sequence: MDFTSLRGSLFYRLNAAVNFTSFYNAQKSSPASPGVKKESEYITETIYMLKPDNSGNTSDENDDIPLSKRAAVKKYACGTCYENFKTKSSLLSHLSATLHKARRGRVGVINRYYCDNCDYGFSELNEMEEHKQKCRLTFFPINEDELPQDTLALAAAGILKSEIDIKDEMIKEENQIENENPAPPNNENADEINDKYKCSKCLFKFPLKADLTRHFRLRHIDKNDKNHRRRKSEIIPQYYCDVCPKGFTRRYDMQKHRKQSHPDVLEKDSSIKTKAQMNAELLARCRVEFEGKTHYKCEHCSRIIHLSYNFLRHQTIHTGVRAFFCHLCGKSFRMSSGLNRHIKELHYGVKNHSCDICGRCFASKNTRDDHMNIHTGARPFICDQCGKSFKQKASLHVHKIFHTNDKPFICRTCGKRFRRATELKVHGWLHTGYKPHECPICGSRFRLAQDLKRHQKTHSKDYQVECEECGARFGQARYLKSHMKTHRKKEITREMNELLITIDKYQEVSSRTQPPDLQKVEHDAAMFDSPPTSPNTEVEYINIITEPAIDDINAVNTRGNVQIIKIDMPVEINKPKKFHSSIYLCQKCDTAFATNLDFEIHLETHENFSTEEKMPEVIGQTECHINIETNDKLNNIYSKEIKNICPICLVTFKKKSELMRHNSEHPLIIQCDKCNKKFSDDKFLEIHVRDNHSKAVLDCKYCLNKFSTKLLLNNHLRSQHVVCEICFIKCESVVALKAHSRGHVEKKSNKLEKLYPCDKCSKSFRSKSGLERHLEFNHGLKALPHLFYCTLCSLSFNNETLLKYHILNHDTAPDLTCEICFKKFNRISNLNAHIKTHVKDIFCKVCCSSFISQFRLENHLSIHTDAEIVDCERLPNSIECPFENCGQIFPSRLQMYNHKKVHLNIVEHCCSDCDRKFKTISELATHRKIHHESDTYCYTCGKQFSTIKTLREHIRVHTGEKPFECDVCKTQFRCQSSMVAHRAIHSTERRYMCGICKRTFARAAYLKEHLRTHREERPFSFDLKRRLMKTPANLNHLEPSLPMYHSLLCQNFLDHFYDQNYAENWLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -