Basic Information

Insect: Sisyra terminalis
Gene Symbol: -
Assembly: GCA_958496175.1
Location: OY292279.1:45189027-45208593[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 6.5e-05 0.0043 17.6 2.1 1 23 201 223 201 223 0.97

2 25 0.0029 0.19 12.5 0.1 1 23 229 251 229 251 0.98

3 25 0.00027 0.018 15.7 1.3 1 23 257 279 257 279 0.98

4 25 5.2e-08 3.4e-06 27.4 0.4 1 23 285 307 285 307 0.99

5 25 6.2e-05 0.0041 17.7 0.8 1 23 313 335 313 335 0.98

6 25 5e-06 0.00033 21.1 1.0 1 23 341 363 341 363 0.98

7 25 0.00031 0.021 15.5 0.4 1 23 369 391 369 391 0.98

8 25 0.00016 0.011 16.4 0.6 1 23 397 419 397 419 0.98

9 25 1.2e-05 0.0008 19.9 0.3 1 23 425 447 425 447 0.99

10 25 1.5e-07 1e-05 25.9 0.6 1 23 453 475 453 475 0.98

11 25 5.8e-07 3.8e-05 24.1 3.1 1 23 481 503 481 503 0.99

12 25 9.6e-06 0.00064 20.2 4.3 1 23 509 531 509 531 0.99

13 25 0.0059 0.39 11.5 1.7 1 23 691 713 691 713 0.95

14 25 6e-06 0.0004 20.9 4.1 1 23 719 741 719 741 0.97

15 25 6.1e-05 0.004 17.7 0.2 1 23 747 769 747 769 0.98

16 25 0.00016 0.01 16.4 0.7 1 23 775 797 775 797 0.97

17 25 8.6e-05 0.0057 17.2 0.4 1 23 803 825 803 825 0.97

18 25 0.00087 0.058 14.1 1.3 1 23 831 853 831 853 0.97

19 25 0.028 1.8 9.4 2.8 1 23 859 881 859 881 0.96

20 25 2.6e-05 0.0017 18.9 1.8 1 23 887 909 887 909 0.98

21 25 0.0045 0.3 11.8 1.9 1 23 915 937 915 937 0.96

22 25 4.6e-06 0.0003 21.2 2.4 1 23 943 965 943 965 0.97

23 25 6.5e-05 0.0043 17.6 1.1 1 23 1112 1134 1112 1134 0.97

24 25 2.4e-05 0.0016 19.0 1.0 1 23 1283 1305 1283 1305 0.97

25 25 7.5e-06 0.0005 20.6 1.7 1 23 1311 1333 1311 1333 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	6.5e-05	0.0043	17.6	2.1	1	23	201	223	201	223	0.97
2	25	0.0029	0.19	12.5	0.1	1	23	229	251	229	251	0.98
3	25	0.00027	0.018	15.7	1.3	1	23	257	279	257	279	0.98
4	25	5.2e-08	3.4e-06	27.4	0.4	1	23	285	307	285	307	0.99
5	25	6.2e-05	0.0041	17.7	0.8	1	23	313	335	313	335	0.98
6	25	5e-06	0.00033	21.1	1.0	1	23	341	363	341	363	0.98
7	25	0.00031	0.021	15.5	0.4	1	23	369	391	369	391	0.98
8	25	0.00016	0.011	16.4	0.6	1	23	397	419	397	419	0.98
9	25	1.2e-05	0.0008	19.9	0.3	1	23	425	447	425	447	0.99
10	25	1.5e-07	1e-05	25.9	0.6	1	23	453	475	453	475	0.98
11	25	5.8e-07	3.8e-05	24.1	3.1	1	23	481	503	481	503	0.99
12	25	9.6e-06	0.00064	20.2	4.3	1	23	509	531	509	531	0.99
13	25	0.0059	0.39	11.5	1.7	1	23	691	713	691	713	0.95
14	25	6e-06	0.0004	20.9	4.1	1	23	719	741	719	741	0.97
15	25	6.1e-05	0.004	17.7	0.2	1	23	747	769	747	769	0.98
16	25	0.00016	0.01	16.4	0.7	1	23	775	797	775	797	0.97
17	25	8.6e-05	0.0057	17.2	0.4	1	23	803	825	803	825	0.97
18	25	0.00087	0.058	14.1	1.3	1	23	831	853	831	853	0.97
19	25	0.028	1.8	9.4	2.8	1	23	859	881	859	881	0.96
20	25	2.6e-05	0.0017	18.9	1.8	1	23	887	909	887	909	0.98
21	25	0.0045	0.3	11.8	1.9	1	23	915	937	915	937	0.96
22	25	4.6e-06	0.0003	21.2	2.4	1	23	943	965	943	965	0.97
23	25	6.5e-05	0.0043	17.6	1.1	1	23	1112	1134	1112	1134	0.97
24	25	2.4e-05	0.0016	19.0	1.0	1	23	1283	1305	1283	1305	0.97
25	25	7.5e-06	0.0005	20.6	1.7	1	23	1311	1333	1311	1333	0.98

Sequence Information

Coding Sequence: atgtcgTCATCCTATGAAATATCAAAATGTTTACTATGTATGGGACACTATAAAGTGATGATTCCTTTGGACCAAACTTTAAACCAATGTGAAACTTTAACAGTGGAACAAGTTTTAGAACATTTACAGTTCTCTACAatTCCACAATTGAAACGACTTGGTGCAGTATTGTGTTGCATTTGTGTGGCAAAAGTGCAGTcttgtttcaaaattaaaacgcAATGTTTCCAATTGGGTAAAGAGTTGGAAATCGAAAGTGCATTCAATGGTTCTTCAGAGGTTTCACCATTGCCACCACTGGAAATTATAACACCTAACAGTATTACTGATGAACCCATTGAAgaaaattgcattgaaaatgATAATCTTAGCAAATCATACACAAATGCCGAAATCAAAGCGGAAATCAATGATGAAGATATcgaaaatatatcaacaaattCAGCCAATGTAATGCCAGAAACGAATGCCGAAAAtaattgggaaataaaaaatgaaattgaaattgtcgagaatattttaaaaatcgaaaatgatGAATCATACACTCGGCCAATCAAGCTTGATTCCAATGAGCAAAAGAGCATTGGAAATAATTCtcatgtttgtgatgtttgcaACAAATCATTTACATACCTAAGCCGTTTAATATCACATAAACGAGTTCATACTGGTGAAAAGCCTTACgtatgtgatgtttgtaacaTATCGTTTTTATATCCAAGTGGATTAGTACGACATAATAGAATTCACACTGGTGAACGGCCGTACGTATgcgatgtttgtgataaatcatttctGCGTTCAGTACATTTAGATCAACATAAACGAGTTCACACGGGTGTGAAGCCGTACGTGTGTGAAGTTTGTAacaaaTCGTTTTCAAGTCCCAGTAATTTAGTAGTGCATAAACGAACTCACACTGGTGAACGGCcgtacgtttgtgatgtttgtaacaaATCATTTCTGCGTTCCGACAAATTGGCTAAACATAAACGAATTCACGCTCGTGGAGGGCCGTACgcatgtgatgtttgtaacaaaTCATTTCGTCGTTTAGAAAAACTAGTGAAACATAAACGAATTCATAGCGGGGAAAAACCGTACACATGTGCTGTTTGTAataaatcatttttgcGTCAGGAATATTTAGCTCAACATGAGCGAATTCATAGTGGTGAAAAGCCTTTCGTgtgcgatgtttgtaaCAAATCATTTCTGCGTTCTGAAAGTTTAGTTCAACATAAACGAATTCACACCAGGGAGAAGCCGTACTCatgtgatgtttgtgCCCAATCTTTTCCACGTCCAAATGATTTAATGCGCCACAAACGAACGCATGCTGGTGAAAAGCCTTACGTAtgcgatgtttgtaATAAATCATTTCGTCAGTCAGGTAATTTAGCTAAACATAAACGAATTCATACTGGCGAGAGGAATTACACATGTGGTGTTTGTAacaaaTCATTTTCAAGGTGTAGTAGTTTAGCACGACATCGACGAGTTCATACTGGTGAAAAGCCTTACacatgtgatgtttgtaacCATTCTTTTTCACATTCAGGTGATTTAGTACGACATAAACGTACTCACACGGGTGAGAGGCCTTATgcgtgtgatATTTCGGATGTTGAAACAATCGGTGGTGCTTTGTGTTTCACTTGTTTAACAAAACTGCACTCTTGTTACCAATTAAAAACAACATGTGATCGAATAGGAAAACAATTGAAGATACTATCCGAAGACACCAACTGTTGGTGGTCTCCAATTTCAACGATGCCAACATTTAGTACTGTAATACCGAAAAttaatgaggaaaaaataaGTAAAGGTCCAATCACACGTGCCGATATTTCCAAGCCAACTACGATCGATTATTCCATTAGTAAATCTGAAATGGATATTGATCCGGAAATTTCCGTAGAAACTTCAAAGTATGAAACAAATGCGATTAATGATGTTCATATTAAATCTGAAATTGAGGTGGACGAGGGAATTTTCTCAGAGAAAGTCACAAATCTAGAATCTCACCAAAAGAATAATCCAATAATTCATACGGTCGAAAAGCCGCACgcttgtgatgtttgtaatCGTTTATTTCctttcaaacaaaatttgagTAAACATAAACTAATACACACTGGTAAAAAGCCGCACGTTTGTGATATTTGTAataaatccTTTATTCACAAAACGGATTTAAATAGACATACATTGACACACACTGGAGAAAAATCgtatgtttgtgatgtttgtaataagttaTTTGGTCTGAAAACAAACTTAAAGGCACATATGTTGATACACACTGGTGAAAAACCGTACGTTTGTGATGTGTGcaacAGATTATTTGTTCGGAAAatagatttaaagaaacataaaGTGACACACACTGATGAAAAGCcgtacgtttgtgatgtttgtaaaaaatcattTGCTCGTGAAGCAAGTTATAACAGTCATAAATTAATACACACTGGTGAAATGTCGCACGTTTGTGACGTTTGTAATAAATTATTTGCTTACAAACTAAATTTAATGAGACATAAATTGATACACACTGGCGAAAGGCCgtatgtttgtgatgtttgtaataaatcatatACTTGCAAAACAAATTTAGACAGTCATAAATTGTTACACACTGGTGAAAAACCgtatgtttgtgatgtttgtaataaatcatacACTCAAAAAACAAGATTACGAAGGCATAAATTGATACACAGTGGTGAAAAACcgcacgtttgtgatgtttgtaataaATCATTTACTTACAAAACAATATTACTGAGCCATAAAATGATACACACTGGTGAAAAACCGCACGTTTGTGATATTTGTAataaatcatttactcAAAAACAGGCATTACTGAGGCATAAATTGACACACACTGGTGAAAAGCTGCTGGATTGTGATGTTTGTCATAAAGCTTTGTGTTTCACTTGTTTAACAAAACTGTACTCTTGTTACCAATTAAAAACAACATGTGATCGAATAGGAAAACAGTTGAAGATAATATCCGAAGACACCAACTGTTGGTGGTCACCAATTTCAACGATGCCATCATTAAGTACTGTAATACCGAAAAttaatgaggaaaaaataaGTAAAGGTCCAATCACACGTGCCGATATTTCCAAGCCAACTACGATCGATTATTCCATTATTAAATCTGAAATGGATAATGATCCGGAAATTTCATTTCCCGTTAATGATGTTCATATTAAATCTGAAATTGAAGTGGATGAGGGAATTTTCTCAAAGAAAGTCACAAATTTAGAATCTCACCAGAGGAATAATCCAATAGTTGATATGGACGAAAAACcgcacgtttgtgatgtttgtaatCGTTCATTTCCTTTCAAGCCAAATTTGATGAGACATAAATTAATACACACTGGTAAAAAGCGGCACATTTCAGATGTTGTAACAATCGATGGTGCTTTGTGTTTCACTTGTTTAACAAAACTGCACTCTTGTTACCAATTAAAAACAACATGTGATCGAATAGGAAAACAATTGAAGATAATATCCGAAGACACCAACTGTTGGTGGTCTCCAATTTCAACGATGCCATCATTAAGTACTGTAATACCGAAAATTAATGCGGGAAAAATAAGTGAAGGTCCAATCACACGTGCCGATATTTGCAAGCCAACTACGATCGATTATTCCATTATTAAATCTGAAATGGATAATGACccagaaatttcatttcccGTTAATGATGTTCATATTAAATCTGAAATTGAAGTGGATGAGGGAATTTTCTCAAAGAAAGTCACAAATCTAGAATCTCACCAGAGGAATAATCCAATAGTTCATATGGACGAAAAGCcgcacgtttgtgatgtttgtaATAAGTTATTTGCtctcaaatcaaatttaaagacACATATGTTGATACACACTGGTGAAAAGCcgtacgtttgtgatgtttgtaataaatcatttactcACAAAACAGGATTAGTGAGGCATAAATTGATACACAGTGGTGAAAAACTGCAGgattgtgatgtttgtaataagTAA
Protein Sequence: MSSSYEISKCLLCMGHYKVMIPLDQTLNQCETLTVEQVLEHLQFSTIPQLKRLGAVLCCICVAKVQSCFKIKTQCFQLGKELEIESAFNGSSEVSPLPPLEIITPNSITDEPIEENCIENDNLSKSYTNAEIKAEINDEDIENISTNSANVMPETNAENNWEIKNEIEIVENILKIENDESYTRPIKLDSNEQKSIGNNSHVCDVCNKSFTYLSRLISHKRVHTGEKPYVCDVCNISFLYPSGLVRHNRIHTGERPYVCDVCDKSFLRSVHLDQHKRVHTGVKPYVCEVCNKSFSSPSNLVVHKRTHTGERPYVCDVCNKSFLRSDKLAKHKRIHARGGPYACDVCNKSFRRLEKLVKHKRIHSGEKPYTCAVCNKSFLRQEYLAQHERIHSGEKPFVCDVCNKSFLRSESLVQHKRIHTREKPYSCDVCAQSFPRPNDLMRHKRTHAGEKPYVCDVCNKSFRQSGNLAKHKRIHTGERNYTCGVCNKSFSRCSSLARHRRVHTGEKPYTCDVCNHSFSHSGDLVRHKRTHTGERPYACDISDVETIGGALCFTCLTKLHSCYQLKTTCDRIGKQLKILSEDTNCWWSPISTMPTFSTVIPKINEEKISKGPITRADISKPTTIDYSISKSEMDIDPEISVETSKYETNAINDVHIKSEIEVDEGIFSEKVTNLESHQKNNPIIHTVEKPHACDVCNRLFPFKQNLSKHKLIHTGKKPHVCDICNKSFIHKTDLNRHTLTHTGEKSYVCDVCNKLFGLKTNLKAHMLIHTGEKPYVCDVCNRLFVRKIDLKKHKVTHTDEKPYVCDVCKKSFAREASYNSHKLIHTGEMSHVCDVCNKLFAYKLNLMRHKLIHTGERPYVCDVCNKSYTCKTNLDSHKLLHTGEKPYVCDVCNKSYTQKTRLRRHKLIHSGEKPHVCDVCNKSFTYKTILLSHKMIHTGEKPHVCDICNKSFTQKQALLRHKLTHTGEKLLDCDVCHKALCFTCLTKLYSCYQLKTTCDRIGKQLKIISEDTNCWWSPISTMPSLSTVIPKINEEKISKGPITRADISKPTTIDYSIIKSEMDNDPEISFPVNDVHIKSEIEVDEGIFSKKVTNLESHQRNNPIVDMDEKPHVCDVCNRSFPFKPNLMRHKLIHTGKKRHISDVVTIDGALCFTCLTKLHSCYQLKTTCDRIGKQLKIISEDTNCWWSPISTMPSLSTVIPKINAGKISEGPITRADICKPTTIDYSIIKSEMDNDPEISFPVNDVHIKSEIEVDEGIFSKKVTNLESHQRNNPIVHMDEKPHVCDVCNKLFALKSNLKTHMLIHTGEKPYVCDVCNKSFTHKTGLVRHKLIHSGEKLQDCDVCNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -