Basic Information

Insect: Sisyra terminalis
Gene Symbol: -
Assembly: GCA_958496175.1
Location: OY292279.1:43004236-43015654[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00033 0.022 15.4 1.7 1 23 209 231 209 231 0.95

2 27 8.4e-05 0.0056 17.3 1.5 1 23 237 259 237 259 0.97

3 27 7.1e-05 0.0047 17.5 0.3 3 23 267 287 266 287 0.96

4 27 0.007 0.46 11.2 2.0 2 23 459 479 458 479 0.96

5 27 0.00018 0.012 16.3 0.5 1 23 485 507 485 507 0.97

6 27 0.00015 0.01 16.4 0.2 2 23 513 534 513 534 0.96

7 27 8.5e-06 0.00056 20.4 0.5 1 23 540 562 540 562 0.98

8 27 2.2e-07 1.4e-05 25.4 0.2 1 23 703 725 703 725 0.97

9 27 9.7e-05 0.0064 17.1 0.1 1 23 731 753 731 753 0.97

10 27 3.1e-06 0.0002 21.8 1.8 1 23 758 780 758 780 0.98

11 27 0.0017 0.11 13.2 2.4 1 23 786 808 786 808 0.97

12 27 2.1e-07 1.4e-05 25.5 0.1 1 23 814 836 814 836 0.97

13 27 1.4e-05 0.00095 19.7 0.9 1 23 842 864 842 864 0.97

14 27 0.0003 0.02 15.5 4.4 1 23 869 891 869 891 0.97

15 27 0.015 0.97 10.2 0.2 1 23 897 919 897 919 0.92

16 27 3.6e-08 2.4e-06 27.9 1.3 1 23 925 947 925 947 0.98

17 27 0.00087 0.057 14.1 1.6 1 23 953 975 953 975 0.95

18 27 3.1e-05 0.002 18.7 2.3 1 23 980 1002 980 1002 0.97

19 27 0.0026 0.17 12.6 0.1 1 23 1008 1030 1008 1030 0.96

20 27 1.4e-06 9.5e-05 22.8 0.5 1 23 1036 1058 1036 1058 0.98

21 27 1.5e-05 0.001 19.6 0.3 1 23 1064 1086 1064 1086 0.97

22 27 3.6e-05 0.0024 18.4 1.8 1 23 1091 1113 1091 1113 0.98

23 27 0.51 33 5.4 0.1 7 23 1251 1267 1246 1267 0.92

24 27 5.9e-05 0.0039 17.8 0.5 1 23 1273 1295 1273 1295 0.97

25 27 0.00015 0.0097 16.5 2.8 1 23 1300 1322 1300 1322 0.98

26 27 7.8e-05 0.0052 17.4 0.1 1 23 1328 1350 1328 1350 0.97

27 27 0.17 11 6.9 0.1 1 16 1356 1370 1356 1372 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00033	0.022	15.4	1.7	1	23	209	231	209	231	0.95
2	27	8.4e-05	0.0056	17.3	1.5	1	23	237	259	237	259	0.97
3	27	7.1e-05	0.0047	17.5	0.3	3	23	267	287	266	287	0.96
4	27	0.007	0.46	11.2	2.0	2	23	459	479	458	479	0.96
5	27	0.00018	0.012	16.3	0.5	1	23	485	507	485	507	0.97
6	27	0.00015	0.01	16.4	0.2	2	23	513	534	513	534	0.96
7	27	8.5e-06	0.00056	20.4	0.5	1	23	540	562	540	562	0.98
8	27	2.2e-07	1.4e-05	25.4	0.2	1	23	703	725	703	725	0.97
9	27	9.7e-05	0.0064	17.1	0.1	1	23	731	753	731	753	0.97
10	27	3.1e-06	0.0002	21.8	1.8	1	23	758	780	758	780	0.98
11	27	0.0017	0.11	13.2	2.4	1	23	786	808	786	808	0.97
12	27	2.1e-07	1.4e-05	25.5	0.1	1	23	814	836	814	836	0.97
13	27	1.4e-05	0.00095	19.7	0.9	1	23	842	864	842	864	0.97
14	27	0.0003	0.02	15.5	4.4	1	23	869	891	869	891	0.97
15	27	0.015	0.97	10.2	0.2	1	23	897	919	897	919	0.92
16	27	3.6e-08	2.4e-06	27.9	1.3	1	23	925	947	925	947	0.98
17	27	0.00087	0.057	14.1	1.6	1	23	953	975	953	975	0.95
18	27	3.1e-05	0.002	18.7	2.3	1	23	980	1002	980	1002	0.97
19	27	0.0026	0.17	12.6	0.1	1	23	1008	1030	1008	1030	0.96
20	27	1.4e-06	9.5e-05	22.8	0.5	1	23	1036	1058	1036	1058	0.98
21	27	1.5e-05	0.001	19.6	0.3	1	23	1064	1086	1064	1086	0.97
22	27	3.6e-05	0.0024	18.4	1.8	1	23	1091	1113	1091	1113	0.98
23	27	0.51	33	5.4	0.1	7	23	1251	1267	1246	1267	0.92
24	27	5.9e-05	0.0039	17.8	0.5	1	23	1273	1295	1273	1295	0.97
25	27	0.00015	0.0097	16.5	2.8	1	23	1300	1322	1300	1322	0.98
26	27	7.8e-05	0.0052	17.4	0.1	1	23	1328	1350	1328	1350	0.97
27	27	0.17	11	6.9	0.1	1	16	1356	1370	1356	1372	0.80

Sequence Information

Coding Sequence: ATGTCGAAATTAAATGATCCCAAAAGCTGTTTGATATGTAAAGAACAGTACAAAATAATGATACATTTGGAGCAAATTTTGAATGACTTTGGTACTCTAACGGTGGCACAAGTTTTACAAAGTTTACATTTCCTTAGTATATCCGATGCGGAAAAACTTTGTCCATTCTTGTGCGTGGTTTGTATGGCGAAAATTAAATCTTGTTACGATTTTAAAATGATATGTCATCAATTGGAAAAGAAAATGGGTAACGTCACCGGCGGTTCCGGCTGTGAATCGGCACCAGCTCCGTTTTACGTTATGAATCCATACTCAAATTACTATGAAAGTCTAAAAAAAACTACCACCGAAAACgTTAAGAATGAGGATATTGCAAGTCCAATTTCATCTAGGAGAATTTTCGAAGATAATGAATTGGGAAacttgaactttaaaaaaatgactaaaatcAAAGAGGAAATTGATGATAATATTGAAGACACATACCAGGAAAATGTATCGCAAGAATCAAACACAATGAAAGATTATCAAATTAAATCCGAAATCGAAATCGATACAAAATCATATGAATCTATAAACAATCTACAAATCAATGAAACTGATAAAAAAGTACGCAAAAAGCGGCATGCATGTCCCGTTTGTCAAAAACGTTTCGTAACCAGATGGAATATGCGGCaacattattttattcacaCGGGCGAGAAGCCCCACGTTTGTGATATTTGTAgtaaatctTTTAATGCTTCAACGAGTTTAACTCGTCATAGATTAATTCATACCGGTGAAAAACCTAAtatttgtgatgtttgtaataaatcatttgctAGTCCCACCTACTTGAAAAGTCACAAACTAATTCACATTGGCGAAAAACCGCACTATTGTGATATTTGTAaTTCTGCAAAACTTGTTCCAAACATATGTTTGATGTGTGCCGCCAAAGTTCATGCATATTACTTGTTTAAAACAAACTTCGATGATAGAGGAAAATCAATGGCAACCGTAACCAATGGATCCTGGATGCCATCTGTAGATCCAAATTTGGTTCCGATAAATAGTCCTAAATCAGAATATAATTGGGAAAACAGCCAAAATCAAAGTGTTGATGTAATTTCGggtgaaaatcaaatttgtacGAAAGGGAATATAAAAGAATTATGTGAGGAAAGAAATGATATAAATTTAGTACAGAAAGTGTCGCCACAATCTTCGGATGAGACCAATTGTTTAATCAAATCAGAAATTGATATTCCAGCGGATATATTTCCATTAAAACAAGaaccaAATATACAGTCGCAACAACAAAATATTAGAATGATCGCTAAGGAAAACGTTTTGCATAAACATTCTTCAACTCGTAGTGGCAAAAAAtccgtttgtgatgtttgtcATAAGACATTTAGTGGAAAAAATTTGGCAAAACATAAATTGACTCATGGAGAAGAAAAGCCATTCGTTTGTGACGTTTGTAACAAATCATTTAAACTTGCCATATATTTACGTCAACATAAACTGATTCATGATATCAAGAATAACGTTTGCGATATTTGTGATAAATCATTTGTGACCCAAAAACGTTTAGCTGTTCATAAATTAATTCACATGGATGATAAACCGTATGTTTGCGATGTTTGTGaTAAATCGTTTGGTACTGCCAGATATTTACGTAAACATAAATTGATTCATGCAAGTAAAAAGTGCCAAGTTAGCGATGTTGGTGataaatcttCTGATCAATCAAATTTGTTGGATATGGATACATCTGTAGATCCACTTTTGGTTCCGATAAATAATCCTAAATCAGAAGATAATTGGGAAAATAGCCAAAATCAAAATGTTGAAGTAAATTcgagtgaaaatcaaatttgtacgaaattgaatataaaagaattatttgaGGAAAGAAATGATATAAATTTAGTACAGAAAATGACGCCACAATCTTCGGATGAGACCAATTGTTTAATCAAATCCGAAATTGATATTCCAGCGGATATATTTCCAGTGAAACAAGACCCAAATTATGAGTCTCCACAGAATGATGAAACGATTGCTTATGAAAAAGATTTGGGTTCACATTCTGGAATTCACACTGGTGAAAAGAATTACGTGTGCAATGTTTGTGataaatCCTTCAGTCAAGCGGATAATTTAGCAAGACATAAAATTATACATACAAAACTAAGACCCTACGTTtgcgatgtttgtaataaaccTTTTCAGCAATTGGGTGCATTGAACACTCATATATTACTACATGATGATAGTTCTTATGTTTGTAATGTTTGTAataaatcatttactaCTCTAAGATATTTGAGAAGACATAAATTGATTCATGGCAGTGAAAAACCTTACGCGTGCGGTGTTTGTCacaAATCTTTTATAACACCAAAATGTTTAGATACTCATAAATTAATTCACATGGACAAAAAACCTTATGTTTGCAATATTTGTGATAAATCCTTCAGTCAAGCAGGCAATTTAGCAAGACATAAAATTATACATACAGAACTAAGACCATACGTTtgcgatgtttgtaATAAATCTTTTCAGCAGTCGAGTACATTGAAGGTGCATAAATTGCTACATGGTGGTAGTCCTCACGTTTGTGATATTTGTCataaatcattcaATACTGGCAGATATTTGAGAAAACATCGATTGATTCATAGCGGTGAAAAACCTTATGTTTgcgatgtttgtgataaatcatttttgtttCCAGAAAGTTTGGCTGATCATAAATTTCTTCATACTAATGACAGGCCTTATGTTTGCGATGTTTGTGataaatcctTTACGCAAAGGAGTAACTTAAAACGACATAAAATGATACATACAGGAGTAAAACCCCACGTTTGCGATGTTTGTGGTAAATCGTTTGGGGAATTGCATACATTGAAGGTTCATAAATTGTTACATGGCAACAGTCCTCATGTTTGTGATATTTGTCATAAATCGTTTGTTACTGCTAGATATTTACGAGCACATAAATTGATTCATAGCGGTGAAAATCCTTATGTTTgcgatgtttgtgATAAACGATTTGTATCGGCAAAAAGAATGGCTGaccataaaattattcatactGGTGAAAAGCCATATGTTTGCGATGTTTGTGaaaaacccTTCACGCAGATGAGTAATTTAAAACGACATAAAATGATACATGTAGGATTAAAACCTTACGTTTGCGATGTTTGCAATAAATCTTTTCGGGATTTGAGTACGTTGAATGGTCATAAATTGATACATGAAGCTTCCCAatatgtttgtgatgtttgccctAAATCATTCCATACTGCCAGATATTTACGTAAACATAAATTGATTCATGCAAGTAAAAAATGCCAAGTTAGCGATGTTGGTGataaatcatgTGATCAATCAAATTTGTTGGATATGGATACATCTGTAGATCCACTTTTGGTTCCGATAAATAATCCTAAATCAGAAGATAATTGGGAAAATAGCCAAAATCAAAATGTTGAAGTAAATTcgagtgaaaatcaaatttgtacGAAAGGGAATATAAAAGAATTATGTGAGGaaagaaattatataaatttagtaCAGAAAGTGTCGCCACAATCTTCGGATGAGACCAATTGTTTAATCAAATCAGAAATTGATATTCCAGCGGATACATTTCCAGTGAAACAAGaaccAAATTTTCAGTTTCAACAGAATGTTGAAACCATTGCCGATGACAAAGATTTGGCTAAACATTCAGTATGCAATAATGGTGataaatcCTTCAGTCGAGTAGGTAAATTAATAACACATAAAATGAAACATATCGAAGAAAGGCCCTACATTTGCGATGTTTGTGataaatcatttcaGCAATTGGGTACATTAAAGGTACATAAATTACGACATGGTGATAGTCCttatgtttgtgatgtttgtcaCAAATCATTCAATACCGGCAGATATTTGAGAAAACATAAATTGATTCATAGCGGTGAAAAACTTTATGTTTGCGATATTTGTGataaatcatttgtGTTGCCAAAAAGTTTGGCTGATCATAAATTAATTCACACTGGTGAAAAGCCACATGTTTGCAATATTTGTGataaatcatcTGATCAATCGAATTTGTTGGATATGGATACATCCGTTGATCCACATTTGGTTCCGATAAATAGTCCTAAATCAGAAGACAAAtccaaaaacaattaa
Protein Sequence: MSKLNDPKSCLICKEQYKIMIHLEQILNDFGTLTVAQVLQSLHFLSISDAEKLCPFLCVVCMAKIKSCYDFKMICHQLEKKMGNVTGGSGCESAPAPFYVMNPYSNYYESLKKTTTENVKNEDIASPISSRRIFEDNELGNLNFKKMTKIKEEIDDNIEDTYQENVSQESNTMKDYQIKSEIEIDTKSYESINNLQINETDKKVRKKRHACPVCQKRFVTRWNMRQHYFIHTGEKPHVCDICSKSFNASTSLTRHRLIHTGEKPNICDVCNKSFASPTYLKSHKLIHIGEKPHYCDICNSAKLVPNICLMCAAKVHAYYLFKTNFDDRGKSMATVTNGSWMPSVDPNLVPINSPKSEYNWENSQNQSVDVISGENQICTKGNIKELCEERNDINLVQKVSPQSSDETNCLIKSEIDIPADIFPLKQEPNIQSQQQNIRMIAKENVLHKHSSTRSGKKSVCDVCHKTFSGKNLAKHKLTHGEEKPFVCDVCNKSFKLAIYLRQHKLIHDIKNNVCDICDKSFVTQKRLAVHKLIHMDDKPYVCDVCDKSFGTARYLRKHKLIHASKKCQVSDVGDKSSDQSNLLDMDTSVDPLLVPINNPKSEDNWENSQNQNVEVNSSENQICTKLNIKELFEERNDINLVQKMTPQSSDETNCLIKSEIDIPADIFPVKQDPNYESPQNDETIAYEKDLGSHSGIHTGEKNYVCNVCDKSFSQADNLARHKIIHTKLRPYVCDVCNKPFQQLGALNTHILLHDDSSYVCNVCNKSFTTLRYLRRHKLIHGSEKPYACGVCHKSFITPKCLDTHKLIHMDKKPYVCNICDKSFSQAGNLARHKIIHTELRPYVCDVCNKSFQQSSTLKVHKLLHGGSPHVCDICHKSFNTGRYLRKHRLIHSGEKPYVCDVCDKSFLFPESLADHKFLHTNDRPYVCDVCDKSFTQRSNLKRHKMIHTGVKPHVCDVCGKSFGELHTLKVHKLLHGNSPHVCDICHKSFVTARYLRAHKLIHSGENPYVCDVCDKRFVSAKRMADHKIIHTGEKPYVCDVCEKPFTQMSNLKRHKMIHVGLKPYVCDVCNKSFRDLSTLNGHKLIHEASQYVCDVCPKSFHTARYLRKHKLIHASKKCQVSDVGDKSCDQSNLLDMDTSVDPLLVPINNPKSEDNWENSQNQNVEVNSSENQICTKGNIKELCEERNYINLVQKVSPQSSDETNCLIKSEIDIPADTFPVKQEPNFQFQQNVETIADDKDLAKHSVCNNGDKSFSRVGKLITHKMKHIEERPYICDVCDKSFQQLGTLKVHKLRHGDSPYVCDVCHKSFNTGRYLRKHKLIHSGEKLYVCDICDKSFVLPKSLADHKLIHTGEKPHVCNICDKSSDQSNLLDMDTSVDPHLVPINSPKSEDKSKNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -