Ster001512.1
Basic Information
- Insect
- Sisyra terminalis
- Gene Symbol
- bab1
- Assembly
- GCA_958496175.1
- Location
- OY292274.1:26642572-26644430[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-14 1.5e-11 44.0 0.1 3 45 370 412 368 412 0.92
Sequence Information
- Coding Sequence
- ATGGGGGATACTGCGCCACCTCAGCAGTATTGTTTACGATGGAACAACCATCGTTCAAACTTGCTCACAGTTTTCGATGAACTTCTTCATAATGAAGCATTCACAGATGTAACATTAGCATGTGAAGGTGGTTCAGCAAAATGCCATAAAATGGTTCTAGCGGCATGTTCTTCGTATTTCCAAGATTTATTCACGGGATTACCACATCCATGTACACATCCTGTGATTGTACTCAAGGATGTCAAATATACAGAAATCAAAGCGATTTTAGAGTACATGTACAGAGGTGAGGTGAACGTTGCTCAAGATCAATTAGCCGCTTTATTGAAAGTAGCTGAAGCTTTAAAAGTGAAAGGGTTGATTGATGAGAATAGAAATTCAGGAGTGTCGGACAGCCGGTCATCGGTCAAACGGGAAGATCCACCCTTAGAGCATAGTTCACCGCCTACAATTACCACTTCCAGTAATAACGTGCAGTCGGCTGCACAAAGCAGCAGTAGCAATGGATCACCACCTCATTCAACAGGCATGAATGGACCAcattctttttctaaaaatccTTATCATATGTATGGAAAATCACCTGTAATTGAAAGAGGATCAAGAATGGGAATACCTATGTGGGCTGTATCTGGAATGTCTATGCCACATCATGCATCAACAATGACACCCCCTTCTGTAGTAGCTGCCGCTATGTTTAGCAGTTGTTACGAAGCTGCTGGACAAGATGTGTCCCcattaaaaaggaaaaagatATCGAGTATGATGATGAACAGAGACACCCCTATTTTAGGAACCCTACTTGGACAAGGACAAGCCGATTCTTCACAACCCGTTTCATTAGTTTGTCACCCTGATAGTCACGAAAATTTGCATTCAAATGGATCGACTTATAGTGCAAAAACTCCGAAAAATGAGCCTTCTGAGGAAGCACAATCGCCTTACACGGATATATCAATGATAGACGAAGAAGAGAAACATAAAATCCATCACCTATCAACCACATCACCGACATATTCAAATGATATGCGAGGTGTTTCATCGGGAATTGCCACGTATGTTCCTACGCAGAAACCGGAATGGAAACGATATAAACAATACACGCGAAATGATATAATGTCAGCTATTGAAGCAGTACGTACAGGAATGAGTGCCTTACAAGCAGCTCGAAAATATGGTGTCCCATCACGTACACTTTACGACAAGGTAAAAAAACTAGGGATAACTACCAGCCGACCATTTAAACGTGGTTCGAATGGTAGTAGTGTTTGCTTTCCGTACGGTATAAGTGGTACAAGTTCACCATATGGTGGTCAAATATACGAAGGCGAAGAAGCAGCTCTTTCCGCACATCATCCGAACACTTTATTAGAGGGAAGCATACTTCAACACGCCTTAGATGTAAGTCGTTCATCTGGAACACCGAACGGACCTAGTGGACGTTCACCAAGTCCCAGTCCTAGTATGATTCAATATATGCGACAACACAGTCTTACACCGTCACCACCCGATATAAGTGATCATCATCGAAGTGAAACAAATGGCAGCTCCGAAAGAGATCGCGATGATGATAACGATGACCAAGTGGAAGACTTGTCGATACAAAGAAAAGAAGAGCCTCCACAATCCCGCGTTATCGTCCCTCCCATGAACCAAGTGTCGactattataaaaaatgaagaGTCACCAAAAGAAAGTATATGTGACGATATGCGACGAGAAGTTCAGGTAGACGAAGCAAACTAA
- Protein Sequence
- MGDTAPPQQYCLRWNNHRSNLLTVFDELLHNEAFTDVTLACEGGSAKCHKMVLAACSSYFQDLFTGLPHPCTHPVIVLKDVKYTEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLIDENRNSGVSDSRSSVKREDPPLEHSSPPTITTSSNNVQSAAQSSSSNGSPPHSTGMNGPHSFSKNPYHMYGKSPVIERGSRMGIPMWAVSGMSMPHHASTMTPPSVVAAAMFSSCYEAAGQDVSPLKRKKISSMMMNRDTPILGTLLGQGQADSSQPVSLVCHPDSHENLHSNGSTYSAKTPKNEPSEEAQSPYTDISMIDEEEKHKIHHLSTTSPTYSNDMRGVSSGIATYVPTQKPEWKRYKQYTRNDIMSAIEAVRTGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSSVCFPYGISGTSSPYGGQIYEGEEAALSAHHPNTLLEGSILQHALDVSRSSGTPNGPSGRSPSPSPSMIQYMRQHSLTPSPPDISDHHRSETNGSSERDRDDDNDDQVEDLSIQRKEEPPQSRVIVPPMNQVSTIIKNEESPKESICDDMRREVQVDEAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00332534;
- 90% Identity
- iTF_01349759;
- 80% Identity
- iTF_01349759;