Ster004468.2
Basic Information
- Insect
- Sisyra terminalis
- Gene Symbol
- bab1_2
- Assembly
- GCA_958496175.1
- Location
- OY292275.1:13863618-13868647[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.6e-10 6.5e-07 29.1 0.0 4 35 37 69 34 74 0.91 2 3 2.4e-17 2e-14 53.2 0.0 1 43 195 238 195 240 0.95 3 3 2.9 2.5e+03 -1.5 0.4 6 15 329 338 328 344 0.88
Sequence Information
- Coding Sequence
- atgaaactgaTAAATTTGCACATCGTAATATACAACATTTTCTTTACACTTTTCCATTTAGACTTTCCCAGTTTGTTGAAACTTAAAGCACCGACGTGGACCCAGAATCAGCTGAAGGAAGCCATCGAAGCGGTGGTCACGCAAAAAATGCGTTTCACCCAGGCCTCGGCGCGCTACGGAATTCCCAAGGGAACCCTCTACGACAATATTTTGGGCAAATCGAAACGAATGGCCGTGCTCGAAGAGGCCGGCTTAACGAAAAGCGAGGAAGATGCCGTACTCGAATTCTGTTGTGATGTTTCAATTTCCCCGTATAATAGACGCACGAAAAAATCGCTATCGTCCGTCTTGAAATACGTCGAAAAGTTGCGACGATGTCGCGATCCCGAGTTCATGTTCACCGGTTTATCGGGTTTCCGATGGTGGTGGGCTTTTTGTAAAAAGTACAGTATCGTTTCACTGTACTACGAAACAGACAGCTACCAATACCAGTTGCAGTCAATGTGGCAAAAGTGCTGGAACACCAATCAAAGTTTGGTCCATAATTTACGGTTTCGTGAACGAGGACCGTTGAAGTCTTGGAGACCGGAAACAATGGCAGAAGCCATTTTCTCAGTACTCAAAGAAGGGCTTTCGTTATCGCAAGCAGCTCGTAAATATGACATTCCATATCCAACTTTCGTCTTGTATGCGAACCGTGTTCACAATATGCTGGGCCCTTCGGCCGACGGAGGTGCCGATTTACGTCCAAAAGGTCGTGGTCGACCACAACGCATCTTACTGGGAGTTTGGCCAGATGAACACATTCGTGGCGTAATACGTGCGGTCGTTTTTCGAGACACACATCATCATATCAAAGAAGAAGCACATCTAACGGGATATCCAAGATTACATgatGGCTTGAGTATACATAGTTACGGTAATCCAGGATCTTGTAGTAGTAATGGGGGACCTGATCCAAGTGTTTCACCTGGATCAGCAGCTGCCGCTGCTGTTGCGGCTGTGGCTCAAGGTTTCCGCCAACAAATGTGTAGTATTGTAGCAGCCGCTTCTCAGCATCATGGAGGTGCATTAGGAGCACTATTACCTGGAGGAATGGGAGGTTTGGGAGGTGGAAGTGGATCTAGAGGAAGTCCCGCAGATTCAGCTCACGATTTACGAATCAGTCCAACCGCCTCACCTTTAGATACACCTTTATCATCACCTTTAGCTTTGGAACCAGCACTAAACCTAGCTACTCTTGGTGGCAGTGTTGAAGTTGGCATTGGCGTTTCAGGCATGACCTACAAACCTTCCAGAGGCTTTTCATCGCCACGACCAGAAAACTTATTCCAAGATGAAATCGAGGAGTTAGTGAAAAGTCCAATACAATTAACATCACCGCGAATGTCTTTATCAGAACCAAAAGACGTATCGATAAAAATGGAGCCGTTAACTGAATGTCGGGGTGAATGA
- Protein Sequence
- MKLINLHIVIYNIFFTLFHLDFPSLLKLKAPTWTQNQLKEAIEAVVTQKMRFTQASARYGIPKGTLYDNILGKSKRMAVLEEAGLTKSEEDAVLEFCCDVSISPYNRRTKKSLSSVLKYVEKLRRCRDPEFMFTGLSGFRWWWAFCKKYSIVSLYYETDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHHHIKEEAHLTGYPRLHDGLSIHSYGNPGSCSSNGGPDPSVSPGSAAAAAVAAVAQGFRQQMCSIVAAASQHHGGALGALLPGGMGGLGGGSGSRGSPADSAHDLRISPTASPLDTPLSSPLALEPALNLATLGGSVEVGIGVSGMTYKPSRGFSSPRPENLFQDEIEELVKSPIQLTSPRMSLSEPKDVSIKMEPLTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -