Basic Information

Gene Symbol
Kdm5_1
Assembly
GCA_958496175.1
Location
OY292280.1:474239-482474[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.1e-24 6.4e-21 74.7 0.0 2 89 115 199 114 199 0.94
2 2 1 2.1e+03 -0.6 0.0 31 83 1304 1355 1282 1357 0.74

Sequence Information

Coding Sequence
ATGCATAGACGTCTCAATCCTTTTATCAATCGTGATCGGGAAGCAAATCCTCAACCACGTGTTGCAGGACCGAGCAGCTTCACCAGCAGCTATGATCCTAACCGTTTCGAAGAAACCAATTTCATGGTCCCTCCTGAAGCTCCTGTTTTCTCACCAACTATCGAAGAATTCAAAGAACCACTTCAGTACATTGCTCGTATACGTCCCATCGCCGAAAAGTTCGGCATATGCCGCATCAAACCTCCAGAAAACTGGTCACCTCCATTCTGTGTCGATGTGGAAAAGCTGCGCTTCACCCCTCGCATTCAGCGTCTTAACGAGCTGGAGGCCAAGACCCGCATTAAGCTCAATTTCCTGGATCAAATCGCTAAATTTTGGGAGTTACAAGGCTCCACGTTGCGCCTCCCGGTTATTGACCGTAAAGTCGTTGATCTCTACTCCTTGCATCATTTGGTGAAAGAAGGTGGTGGCTACGAAACAGTTAGCAAAAATCGCAAATGGTCCGAGTTGGCCGGAAATATGGGATACCCACGAAAAAGTGGGTCGTACGGTGCTATTTTAAAAGGCCACTATGAACGCATTTTGTATCCTTTTGATATATTCAACCAAGGAAAaactgaagaaaataaaattactgaTaaagatgggaatgaaattgaaataaaaaaagaagtaaacgAAGAGGGAGAAGATATTGAAGGAGAAGATTATGagattaaaagtaataaatctGATTTGGACTATAAACCTCACGAAATTGTTTCTCGCCAAGCAATTCAACCACCACCTGAAAAGCAAGCTCGACGTATGAAACGAATTTGTACCCATTCGCAATTTCCCCACAAAAAgAATAATGAACAGGTTGAGAGCGGTGACGAAAGTGAACAGAATAAAGAGCTCCAGCGTTTGCAGTTTCACGGTGCAGGTCCAAAAATGGCCGGATACAATCGTCCTGCCGAAAAGAACGCCTCGAAAAAATTAGCCCACTCCATTGATCCGTTAGCTAAATATATTTGCCAGAATTGTGGACGTGGAGATGTGGAAGAAGAAATGCTGTTGTGTGATGGTTGCGATGATAGTTATCACACGTTTTGTTTGGTGCCACCACTGTCTGAGGTGCCTGAGGGTGATTGGCGTTGTCCTAAATGTGTCGCTGAAGAAGTTTCCAAGCCAACTGAAGCTTTCGGGTTTGAACAGGCACAAAGAGAATACACTCTATATCAGTTCGGAGAAATGGCCGATCAATTTAAACAAGAATATTTCAACATGCCGGTAGGTGTAATGACGACTGTGCATGTTTCCCGATCGTACATAATGCGTTTGTCAGTTGTACAACACGCGTTTAGGTGCGATCGGGAAACACCGATGAATATCGAAAAACCTAATATTGTTATCGATGGTCACATAAGAAATCATCATTTGAGTATATCGTTACCTCAGAGCAGCAATAAGATGGTTCCTACGTCGGTGGTTGAGAACGAATTTTGGCGTATTGTCTCATCGATCGATGAAGATGTTACAGTTGAATATGGAGCTGATTTACATACGATGGATCATGGTTCAGGATTTCCAACAAAACTCTCATTAAATCTTACAGATGTTGATGCGGAGTACGCAAAAGATGGATGGAATCTGAATAATTTACCTGTCTTGCAAGGTTCCGTACTAGGCTACATCAATGCAGATATATCTGGTATGAAAATACCGTGGATGTACGTAGGCATGTGCTTCGCTACATTTTGCTGGCACAACGAAGATCACTGGAGCTACTCGATCAACTATTTGCATTGGGGGGAACCAAAAACATGGTACGGAGTTCCGGGCTCGAGTGCTGAACTTTTCGAGCAAACCATGAAACAAGCCGCGTCAGAACTTTTCGACTCACAACCGGACCTGTTGCATCAACTTGTCACTATCATGAATCCCAATATTTTGATGCGTGCTGGAGTGCCCGTATGCCGCACCGATCAAGCCGCTGGAGAATTCGTAATCACATTCCCCCGCGCATACCATGCTGGCTTTAATCAAGGCTTTAATTTCGCCGAAGCGGTCAATTTCGCTCCCGCAGATTGGATGAAAATGGGTCGAGAATGCATCAATCACTATTCGAAATTACGACGCTTTTGCGTATTTTCTCACGATGAATTGGTGTGTAAAATGGCGTTGGATTTGGATAAATTGGACTCGTCGGTTGCTGTCGCTGTGCATAAGGATATAATTGACATGATCACGGAAGAAAAGACAATGCGAAAGACTCTACTTGATTGGgGAGTGACCCAGGCAGAACGGGAGGCTTTTGAACTTCTGCCAGATGACGAACGACAGTGTGCGGTTTGCAAAACCACTTGTTTTCTTTCTGCCCTTACATGCTCTTGCACTAAAGACACTTTAGTATGTTTGCGACACTATTTAATGCTCTGTGACTGTCCTGCCGAAAAACACACATTACGCTATCGATACACCCTCGACGAATTCGTGAAAATGCTGCAGAAACTTAAAGCAAAAACCGAATCGTTTGACATTTGGTTGAAAAAAGTGAAGGAATCATTTGCGAAAAATCAACCGCGTACGTTAACTATAGAAGGACTGAGAGAACTTGTAAAAGAAGCcaacacaaaaaaatttcccGAGTGCGAATTGCTGGACCGTTTAAGAAATACTTTAGTGTATGGAGAGAAATGTCTGTCCATAATGGTACGTTTCGATCGTTTAAACAAAAGCACGAGAAGCAAAAGCAATGTTCAGTTTCGTGTAACAATGAATGAATTAACGCAATTTTTGGATGAGTGTCGTAGTCTTCCTCTAGTTTTCAAGGAAATTAATGTCATCCACGAGATGATTAAATCAGGAGAAAAATTTTCTGATGAAGCTACTCATCTTCTACGCAAACCATTACCAAATTTAACAACAGATGTTGTGCAAAGGTTGGTTGATTTTGGTGATTCGTTAATTATCGATTTACGCTTTTTGCCGTTGCTTAAGCAACGGTTAGAACATACGAAATGGTTAGCAAGTCTTCGTGCAAAACGTGAAGCCCGTGATTATATGACGATCGAAGAACTGGATGATTTTATCAAGTTGGGAACTACTCTGCGCCAACACGATTATATTGATGAAACGATTAAAGATCTACGTAGTTTATCGGCAAAAGCTGTCGCCTGGGAAGAAGAAGCCAAAAAATGTGTCGATCCAAAAAGTCCGTCAAGTATTGGCCATCTTGAATCGCTACTAAAACGCGCCCAAGACATGGAAGTGATCATGCCATCGGAAAAACTTCTTCGCGACACATTCGTCGCTATTCAAAATTGGTGTAAAGCTGCAGCGGCGCTTCAAAGACCCGGAGGTTATCCCCACTTTGAGGTCATTCAATCGCTTGTTATGCAAGGGAAAAACATAGCAATAAATTTACCCGAAATGCATTATCTTGAACAAATGTTGAACTCGTCTCGCGCGTGGAAAGAGCGTTTAGTTCGCacgtttttatttaaagaatcgACAACTAATATTGTCGAGGTGCTTTGTCCTAGGCGTTTTGAAATGCCCAAATTCAATGCGGCCATGGAAGGCAATGAAGCGCAGCtggaaattttaaatgcatttaaacgGGCAGAACCCAAGGAAGCGAAGTGGGTGAAAGAACAACGCGAGATTAACGCAGCTAAAGATTTTGACGATCCATATGAAGTGTTTTGTATTTGCGAGAGAAGTCCTCATGGACTAATGTTGAGGTGTAACTTGTGTCTTAATTGGTGTCATTCGAGCTGTGCAGCGTTGCCGAAGAATTTCGTCTCGCTAAAatcacaaatattaaaattgccaGATTCGACTCCGCTTagagattataaatttttgtgtcAGAAATGTATGCGAACTCGCCGACCACGTTTGGACGCCATTTTAGCATTGTTAGTCACGTTGCAGAAGCTTCGTGTGCGACTTGTCGAAGGCGATGCGTTACAATGTGTAGCCGAGCGAGCCATGAGCTGGCAAGATCGAGCACGACAACTGCTACGCAGCCCAGAAATGTCCAAAGTTCTCAGGCGAATTTCCTCCGCTTATTCCAAACACCACAAATCTGACAATAATATGATGTTTTCAATTGACGAAAACAATAAGCCGAGCACAAGCACAGGAAAAACGGAAGACGATGATTGGATCGACATAGCCGAAATAGAAGAAATTGGCGAGCACTCCTCGTCATATAAGCCGGTCATTGATTCCGACAAAGAGGGCGACTTTTGTATCAAACTCACAGAACCTTTGATGAAACAGATAATCGATTTGGCACTAGAAGGTGATCTTTTAGAAGTAACAGTCGAGGAATCGTTATCACTATGGAAAATCATAACGGCCACTAAACCAAAACTAGAACATTATGTCTTCTTAAAATTTTCGccTCGACCTACGCCAACAATAATGCGAAATAAGCGCAAAGGTAGAAAGCGTAAACTTGATGAAGCTGATCAAACAAAATTTGTAGCAAAACGATTATTGGCAGCTGTACGTAACAAGAGACGAAAGAGAAGTAAAGAGTTAAATTCAGATGATGAAGAATGTGCGGCATTCATTTGTCTTTGGCCTTCAGGTACAGAAGTTAATTGGATCCAATGTGATGAATGTAACAAGTGGTATCATATGGTGTGCGTAAATTTAAGACCCAAATCTTTAACTGATGATTTTGAGTTCATTTGCAAACAATGTAGAGACCTCAAGAAAAACAAACCACTAAGTAGTACATCCACCCCACCAGTTGATGAAactgattaa
Protein Sequence
MHRRLNPFINRDREANPQPRVAGPSSFTSSYDPNRFEETNFMVPPEAPVFSPTIEEFKEPLQYIARIRPIAEKFGICRIKPPENWSPPFCVDVEKLRFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSTLRLPVIDRKVVDLYSLHHLVKEGGGYETVSKNRKWSELAGNMGYPRKSGSYGAILKGHYERILYPFDIFNQGKTEENKITDKDGNEIEIKKEVNEEGEDIEGEDYEIKSNKSDLDYKPHEIVSRQAIQPPPEKQARRMKRICTHSQFPHKKNNEQVESGDESEQNKELQRLQFHGAGPKMAGYNRPAEKNASKKLAHSIDPLAKYICQNCGRGDVEEEMLLCDGCDDSYHTFCLVPPLSEVPEGDWRCPKCVAEEVSKPTEAFGFEQAQREYTLYQFGEMADQFKQEYFNMPVGVMTTVHVSRSYIMRLSVVQHAFRCDRETPMNIEKPNIVIDGHIRNHHLSISLPQSSNKMVPTSVVENEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKLSLNLTDVDAEYAKDGWNLNNLPVLQGSVLGYINADISGMKIPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSSAELFEQTMKQAASELFDSQPDLLHQLVTIMNPNILMRAGVPVCRTDQAAGEFVITFPRAYHAGFNQGFNFAEAVNFAPADWMKMGRECINHYSKLRRFCVFSHDELVCKMALDLDKLDSSVAVAVHKDIIDMITEEKTMRKTLLDWGVTQAEREAFELLPDDERQCAVCKTTCFLSALTCSCTKDTLVCLRHYLMLCDCPAEKHTLRYRYTLDEFVKMLQKLKAKTESFDIWLKKVKESFAKNQPRTLTIEGLRELVKEANTKKFPECELLDRLRNTLVYGEKCLSIMVRFDRLNKSTRSKSNVQFRVTMNELTQFLDECRSLPLVFKEINVIHEMIKSGEKFSDEATHLLRKPLPNLTTDVVQRLVDFGDSLIIDLRFLPLLKQRLEHTKWLASLRAKREARDYMTIEELDDFIKLGTTLRQHDYIDETIKDLRSLSAKAVAWEEEAKKCVDPKSPSSIGHLESLLKRAQDMEVIMPSEKLLRDTFVAIQNWCKAAAALQRPGGYPHFEVIQSLVMQGKNIAINLPEMHYLEQMLNSSRAWKERLVRTFLFKESTTNIVEVLCPRRFEMPKFNAAMEGNEAQLEILNAFKRAEPKEAKWVKEQREINAAKDFDDPYEVFCICERSPHGLMLRCNLCLNWCHSSCAALPKNFVSLKSQILKLPDSTPLRDYKFLCQKCMRTRRPRLDAILALLVTLQKLRVRLVEGDALQCVAERAMSWQDRARQLLRSPEMSKVLRRISSAYSKHHKSDNNMMFSIDENNKPSTSTGKTEDDDWIDIAEIEEIGEHSSSYKPVIDSDKEGDFCIKLTEPLMKQIIDLALEGDLLEVTVEESLSLWKIITATKPKLEHYVFLKFSPRPTPTIMRNKRKGRKRKLDEADQTKFVAKRLLAAVRNKRRKRSKELNSDDEECAAFICLWPSGTEVNWIQCDECNKWYHMVCVNLRPKSLTDDFEFICKQCRDLKKNKPLSSTSTPPVDETD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-