Snig006768.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- pnr
- Assembly
- GCA_958496155.1
- Location
- OY292314.1:50066968-50075085[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9e-17 2.7e-13 49.5 3.7 1 35 344 377 344 378 0.98
Sequence Information
- Coding Sequence
- ATGCTATTGCCGCCGCTTTCGCCAACTGCGTTTATTTCGCCGCCGTCATCGCCGTCGTCTTGCCCCAGTCGTCCAGCGACGCCTCCGTCGCCGTCAATTGCCCCGACAGATTTGTCGCGAATGTCCAACGTACCTCAATTGCCAACCACCCTAACCATCACAACCGTGCCGGCCAGTGCAGCACCCGAGGCCGACATCGACAATCCACGTCCACCATCATCCGACCGTTTGCCCAAAATGTCTAGCAGCGGCGTCGATCTGTCCAAACCACCCGAAACTCTGACCTGCATCCCGGAAATTCACTTTCCGTCCTTGAAACGTGACTCGGCCGACGTACTTAGTGATTGTAGTAATAGTAGCGATCCGGAACGTCTGGAAGTTGATATGTCGCAGATGCGACACGAGGACGATGAAGACGTTTCCGACTCGACGCTAAGCGCGCCGCAATCGCCACCGGGTCGTGGTGATCGGCACGTTGTGCAAACGGCGAGTCCTGAATTGTGGCGCGCTTTGGCTGGCCAAGCGTCGTCGCCGTCCAGTCCGAAAACAACCTCAACCTCGCCGCCGAATAATCTGGGCGAAGCCGGACAGTTTTTGCGGCGATTAATCGCTTGTCGCAATCTAGGTATGACAATCACACCAGCCGATCCTATCAAGCAAGAGTCACATCGACAAAAACATAACATGAATGGAAATTTTCGTGAAAGCCACGACGATGAAAACTTCTCAGGAAACACATTAAATCTCTCAATGAAACGGGAGTTGAAAGGCTCGTCAGCGAGACGTAAACAATTTTTCCCAACCAAAGCAGCCGCGGAAGACGCCCAACCTTACAATACGGGTAACAGTATGGAGCTGAGCGCGCCCCTAAGTCCGTGCCAGGACAACGACATGGATTACGCAAGCGGCGCAAATCCCTGGTGCAACACGGAATTGATGAAAACGCAAATCCAAACGGATATTGTGGGCTCGAATAACAGTGGTAGTGGCGATGCCGGAGCAAACGTGCGGCGCGGCGTTGACTTATCATGTACAAATTGCGGCACGATGACAACGACAATTTGGCGCCGCAACGTGCGCGGCGAAATGGTGTGCAACGCGTGCGGCCTGTATTTTAAGTTGCACGGCGTGAATCGGCCGCATACAATGCGTCGCGACACAATCCATACGAGACGCAGGCGGCCAAAGCCCAGCGAAAGTGCAATGGGGAACAAGCAGCGGCACCATCGTCACAAAGTCGTCACGAAAACGGCCGACACGGACCAAATGCTCACCGCCTTACGACGACACATTCAGCCGCATCTAATGCTTGCGTTGCAAAATGAAGCCAAACCACGCGCAAGCCACTTACCGGCGAACAACTACTCGAATTTAATACCATTAAATGAATCACCAACCCATGACAATGACGATGACAACGAACAGATGGAAGAGGAAGAGTTGCCTTTAAACTTGGTCGCGACTTCTCATTTTCCGGATGCAACGCACGCAAAACAATAG
- Protein Sequence
- MLLPPLSPTAFISPPSSPSSCPSRPATPPSPSIAPTDLSRMSNVPQLPTTLTITTVPASAAPEADIDNPRPPSSDRLPKMSSSGVDLSKPPETLTCIPEIHFPSLKRDSADVLSDCSNSSDPERLEVDMSQMRHEDDEDVSDSTLSAPQSPPGRGDRHVVQTASPELWRALAGQASSPSSPKTTSTSPPNNLGEAGQFLRRLIACRNLGMTITPADPIKQESHRQKHNMNGNFRESHDDENFSGNTLNLSMKRELKGSSARRKQFFPTKAAAEDAQPYNTGNSMELSAPLSPCQDNDMDYASGANPWCNTELMKTQIQTDIVGSNNSGSGDAGANVRRGVDLSCTNCGTMTTTIWRRNVRGEMVCNACGLYFKLHGVNRPHTMRRDTIHTRRRRPKPSESAMGNKQRHHRHKVVTKTADTDQMLTALRRHIQPHLMLALQNEAKPRASHLPANNYSNLIPLNESPTHDNDDDNEQMEEEELPLNLVATSHFPDATHAKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01350142;
- 90% Identity
- iTF_01350142;
- 80% Identity
- -