Snig014639.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- CSRNP3
- Assembly
- GCA_958496155.1
- Location
- OY292317.1:26967381-26970152[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.54 1.1e+04 -3.8 1.2 67 67 155 155 112 212 0.49 2 2 1.7e-103 3.6e-99 331.3 8.9 1 218 335 544 335 544 0.94
Sequence Information
- Coding Sequence
- ATGTCCGAGTGCAGTTTTATGGATGTGGCCCCAATAAATCCTAATATCGTTCCCGAGTCGTCGTCATCTACGTCTCGTCTGTCTGAAAACGTAGAAGCGTCATCGTCGCTCGAATTCGATATTTTGCCAACATCGTCTTTATCTTCGTGTTCGTCCTCATCATCGACTACTATTATGGGGTTAGCAAATTCTTCGACGACTACAACGACATCAGCCAACATTAAAGAAATACTTTCGACGACATGCGACGACGGGAATACCACGAGCGATGTTAGAAACTCTTTTGTTAACGTTAATGTTATGCCATGTAGTAGTACAAACGACAGTATTGTTGAATCAATATCACAACTGGAAAAGCGTAATTATTCTAAAACTGTAGAAAATGATAAATCCGTAGCCATAACGACACAACAGCAACAATATGAAGACGAAATTAGAACGCGACTGTTACACGATAAAGACGAAACCAGGAAACTTAATGGAAATACGGAAAACGGCGAAACGTTCGCCGCAATTTTGAAAGGCGAATCGTTAAGTACAGAAGGCGAAGATTCTGCGACTGAAAGCCTACCGAGTGATCTAGCTGTAACTTCTGTACAAGACGAGGAAGTGCAAGATCGGTCGGATGGAAGTGATTCCGGCCTCGGCTCAGAACTTTCCGATGAAAGAGTCGCTTCAGGAATACAGCACTCAACCGAAAGCGACAGCGAAACTTCATTTCTTGATCGCATTCCCGATGAAATCTTACAATCTGAAGATATCCCCGAAAAGACTCTAAGAAAAGTAGATAAGGATTTATCGATAATCGGcgataataaaaacaaagatgAATCTGGTTTTGAATTGGgatttcaaacagaaaaaagtGGAGAAGAAGCGACTAGTTCGACGATAGAGAAAGATTTAGGCGCGATTTTAGATGAAGCGAGTAGAACGGACACATTTCCAAAGAGTAGCTTGAAAAGAAGGTTGCCAAATGATGAGGAATCAGAaccaaaatgtaagaaaaaacgAGGAATTACTTTCGATAGTGTAACAGTTTATTATTTTCCTCGAGCACAAGGATTTACTTGCGTTCCTTCACAAGGGGGCTCTACGTTGGGAATGGGATCGCAACATAGCCATGTCCAGAAATTTTCGCTTAGTGAGCATGCAATTGAACAACGACGTCTTCATCGACAGTTACTACAACAAATTCGTAACGAACGCCACACTAATCCGGGTACCACTGGATCATCTAGTGATGACAGTGAAAGTGAAGAAGAGCCAAGCGAAGGCTCTGAATCGGAAATGGATTTAGATAGTTACTACTTTTTACAGCCAGTTCCCACGCGGCAACGGCGAGCCTTGCTTCGTGCGGCTGGAGTAAGAAAAATTGACGCCTATGAAAAAGACGAATGTCGAGATATTAGATCATCGCGCGAATTTTGCGGATGCGGATGTAAGGTTTACTGTGATCCTGATACGTGTTCTTGTAGTCAAGCAGGTATCAAATGCCAAGTTGATCGACTTAATTTTCCTTGTGGATGTACAAGGGATAATTGTGCGAACTCTAATGGAAGAATTGAGTTCAATCCTGTGAGAGTACGCACGCATTTTATACATACACTGATGCGACTTGAActtgagaaaaagcaaaaattGGAAGTCGATGAAGATGTAAAAAATGAGGGTTCCGCGCAAATGAACTGGATGAATGATCGGCTTGCAATGCCGATGAACTATGAAAATAAACCAATCGCAGGACCGTCTGGTGAAAAATACAATGGAAACTTACTTCGAGATGTTAATTTATCTTCGCACGTTGAAGTTGAGTCGTGCGTTCACAATGGAAGTTTCACTAATTTGCACTATGGTGCACCAGGTGAAGGTCCAGGTGGTCCAGGTTCGTCGCAAAGTACTAACATGACAAATTCTTTTTCTAACATGGGTGAATTACCAGCACGTGAAGATTCATTAGACTTATACACATTTCGAGAAGACTGCTATTCGGAAGAGAACGGCGTAGAACAACTAGCACAAAGAACTAATTACAATAGCACAAATTTACAAGGGCGCAAGCTGCCAATCCCGCAACAACAACATCAAACGTACCAAACGCAATCGACCAACAGCTTTCTCTTTTCGAATTCCGTACCACAAAGATTTCCCGAATTAAGTTTCTCAGTGGGAAGCACACCGCCGATTTCGTACTCTTCAGCAAGTCAAGCAAATCAATATCCCTATCCCACcacaagcttcaacgatttcaATCATTCACATTCCAACCTCGGAGTGTTTAGTCATTATGGCAACATATATGGACCagaattttgtaataaaaacctCGACAGCTCGTCCAACACTGGCAACGTGGACTTTCAACGGCACTCGTCGTCGGCGCCGAGCACCAGCTATGAaactttcaatgaaaatttcgaACCAATAACCGTTTCAAAAGAAAGTCCGACTAACAATCAATACACGAGTCTGGACCCAGTTTCACCGCTTGGGAACAAATTAGAGTCTTTCACCGATCTTCTGCAAGGCAGATATAATTATCCAGCCTTTGACGACTTAAACGGCACCAGTGCCATGGATGGACCATCGGCTACATATAGTAGCGAACTGCCCACGACGGATGCGTCGTCAATCGACACAAAACCATCCGACGATGCTCTAATTAATAGCAATGCCAATTTAGTTACAATTAGCAATAGCAATTCAGACGATTGTGATGAAAATTTTGGTGAAATCATCAAAAAGACTATGGTGGAGACTGTTACGGCATAA
- Protein Sequence
- MSECSFMDVAPINPNIVPESSSSTSRLSENVEASSSLEFDILPTSSLSSCSSSSSTTIMGLANSSTTTTTSANIKEILSTTCDDGNTTSDVRNSFVNVNVMPCSSTNDSIVESISQLEKRNYSKTVENDKSVAITTQQQQYEDEIRTRLLHDKDETRKLNGNTENGETFAAILKGESLSTEGEDSATESLPSDLAVTSVQDEEVQDRSDGSDSGLGSELSDERVASGIQHSTESDSETSFLDRIPDEILQSEDIPEKTLRKVDKDLSIIGDNKNKDESGFELGFQTEKSGEEATSSTIEKDLGAILDEASRTDTFPKSSLKRRLPNDEESEPKCKKKRGITFDSVTVYYFPRAQGFTCVPSQGGSTLGMGSQHSHVQKFSLSEHAIEQRRLHRQLLQQIRNERHTNPGTTGSSSDDSESEEEPSEGSESEMDLDSYYFLQPVPTRQRRALLRAAGVRKIDAYEKDECRDIRSSREFCGCGCKVYCDPDTCSCSQAGIKCQVDRLNFPCGCTRDNCANSNGRIEFNPVRVRTHFIHTLMRLELEKKQKLEVDEDVKNEGSAQMNWMNDRLAMPMNYENKPIAGPSGEKYNGNLLRDVNLSSHVEVESCVHNGSFTNLHYGAPGEGPGGPGSSQSTNMTNSFSNMGELPAREDSLDLYTFREDCYSEENGVEQLAQRTNYNSTNLQGRKLPIPQQQHQTYQTQSTNSFLFSNSVPQRFPELSFSVGSTPPISYSSASQANQYPYPTTSFNDFNHSHSNLGVFSHYGNIYGPEFCNKNLDSSSNTGNVDFQRHSSSAPSTSYETFNENFEPITVSKESPTNNQYTSLDPVSPLGNKLESFTDLLQGRYNYPAFDDLNGTSAMDGPSATYSSELPTTDASSIDTKPSDDALINSNANLVTISNSNSDDCDENFGEIIKKTMVETVTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01349639;
- 90% Identity
- -
- 80% Identity
- -