Snig011471.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- bdp1
- Assembly
- GCA_958496155.1
- Location
- OY292316.1:22993944-22999608[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-08 1.5e-05 25.2 0.0 2 44 400 442 399 443 0.96 2 2 8.4 7.7e+03 -2.7 0.0 31 41 589 599 587 600 0.88
Sequence Information
- Coding Sequence
- ATGCGACGTAGCCGAATTAAAGTTGTTGCCAATGTGCCGAAACGGCGTAAAACCGATAATGTGGAACCGACAGCTGGTGATGCTAACGCCAACGAAAACGAGGAAAAAGTCGATGAAACCCCAGAGCAATCAGTTCAAGTAAACGATCAATCAAAAAACGAAAGTGAAACGATTGAAACTCCCGAAAATGAGTCGATAACAAACGATCCGGAAATCAAACTCGAACAGCGACGATTTCGTGTTAAGGCAGCTGCAAAAATTCCAGTTCGACGTAAAATAAACACTCCGTCGATTAATGTTCCTGAGACAAAATCAAGTGAGGATAATGCGGTGCCTGAAACCGTTAAAACTCCAGCTCCGTTTTTGTCGCCGACTTATGAAGCTAGCACATCGCAATTCCCGTTATCACCTTTGGTTAATACGAACTATCCACGACCGTCACCTTCTTCATCGCCACACAAACCGTTGAATAGATCGTCACGGCTTTTCCGATCAGCACCTCGAATTGGTTTTCGTCGAAATAGTACCAGTGCTAGTGAGTCAGAAGACGAAACGAGACGTTCGACGTGCTCGAATATTTCACATGTTAGTAAACTGGGACATGACACCACGTCGGTGGCTTCTGGGGGAGGAACTGGTGGAGGTTCTGTCGTTGGAAACGCTCCTACAATTCTCAGTGTCGCCACAATCACTAATCCACTTACATTATCATCATCTGATAATTCAAATAGACTGACtttaaaccaaaagaaaaaagttcGACGTTCAGAATTCGCTCGTAAAATTGCCGAGGCCAAGCGTGATTTCCATCATAAGTTTGGAAATAAAATCCCCGATCGTCAAAAGTTAACGATGAtggatttgatattttataatcCAACCAACAATCCAATGCCattGCGTGAAGTTCGAAAATCAGACGAAACTTCATCCGTTGCGTCGATACACGACGATGACATCGCTGATATTGTGGCCACCGCCGAAGAAGAAGCAGCCGACGAGCCCGAAGAAGAGGCCATGCCCGTGCCTCAAGTGAAAATCGGCGAGAACGGCGAAATCATTCTCGACGAACAAAGTTTGGTGATCGAAACGTCCGACATGAAAAAGATCAACAAAGCGGCCGGACTTAACGCGCCTGTGATTAACTACGATGAACTCGAAACGGGTTATGGTGTGTATAAGCGTGCACGCCGGACCAAAGACTGGAGCGATGCCGAGACAAAACAATTCTATCGTGTACTACAAATGTTCGGCACCGACTTTTCACTGATGCTGTCCTACTTCAAAAATCGAACTCGTCGAGATCTCAAACTAAAGttcaaaaaagaagaaaaaattaatcgacAACTCATTGACAAAGTCCTGCTCAATCCTCGTACGTTCGACGTCAACGACCTGGAAAAACTTCTCGAGGAAGACGAAAAGgtcgaaaaaaagaaaatggaagaaaaaaacaaaattaaggaATTGAAAAAGAACGATGTCGAGAAACGAAAGAAGGAAAAACGTGGAAAagcaataagctTTTTTGCTCGTCAAGTATATTCCGATAAGAGCCCTATTATCAGCACAAAAGATGATAGTGTCCCAGTTGAGCCAAGTCCCAGTGAAGCTGCTGTAGAAACCGAAGTCGAGGGTCAAAAATCGAAGAATGTACTTAAGAAGCGAATCAAGATGAAAATTGATTCAGAAAATGAAGACAACGATGACATTGAAAACTTGAATCTCTTAACGCAACAGCAGTTTGAGAATATGTTTAAAAATCCGACCAAATCAGGACGAATGATCAAATCGAGATTACCATCGTTGACGAATGTCTATGAAACCAAGAAACACGTTAATGATATGGTCATGGAAATTGCTCACGAAGAAGAGCCCGAAGTGGAGGCGGCCAGTGATGTGCTACAGTTGCAAATCATTAGTACAAGCAATGCAATTTCGAAGGTTGTCGCAACACGTTTACGATCTTCTGATGGCATCATCGATGAGAACATGACAGCCGATGACCTTTACAATGCACTTGGCGACGATTTGGGAATCACAATCGATGAAAGTTTGTCTCAACAGCCATCAAATGAGCCAGAAAATCCAAGCAAAGAAAATGAAATCGTAGACAGTGTTTGTGTTGAGgagaatgaaaataatttagacTGTAACATTGAATATTTGGAAGAGGTTTTATCGACTCCATCGTCGGAGACTGTAATCAATAAAGAAACGTCCGAAACACAAAATGAGGGAATTCCGATTGATGTTAACGATGAACAATTTCCATTGTTACAATCATTTTTAGGAAATAGCGATTCGATTACGTTAGACGTTGCCGTAGCAAATAACGAAAATGTTTTGTCGTAA
- Protein Sequence
- MRRSRIKVVANVPKRRKTDNVEPTAGDANANENEEKVDETPEQSVQVNDQSKNESETIETPENESITNDPEIKLEQRRFRVKAAAKIPVRRKINTPSINVPETKSSEDNAVPETVKTPAPFLSPTYEASTSQFPLSPLVNTNYPRPSPSSSPHKPLNRSSRLFRSAPRIGFRRNSTSASESEDETRRSTCSNISHVSKLGHDTTSVASGGGTGGGSVVGNAPTILSVATITNPLTLSSSDNSNRLTLNQKKKVRRSEFARKIAEAKRDFHHKFGNKIPDRQKLTMMDLIFYNPTNNPMPLREVRKSDETSSVASIHDDDIADIVATAEEEAADEPEEEAMPVPQVKIGENGEIILDEQSLVIETSDMKKINKAAGLNAPVINYDELETGYGVYKRARRTKDWSDAETKQFYRVLQMFGTDFSLMLSYFKNRTRRDLKLKFKKEEKINRQLIDKVLLNPRTFDVNDLEKLLEEDEKVEKKKMEEKNKIKELKKNDVEKRKKEKRGKAISFFARQVYSDKSPIISTKDDSVPVEPSPSEAAVETEVEGQKSKNVLKKRIKMKIDSENEDNDDIENLNLLTQQQFENMFKNPTKSGRMIKSRLPSLTNVYETKKHVNDMVMEIAHEEEPEVEAASDVLQLQIISTSNAISKVVATRLRSSDGIIDENMTADDLYNALGDDLGITIDESLSQQPSNEPENPSKENEIVDSVCVEENENNLDCNIEYLEEVLSTPSSETVINKETSETQNEGIPIDVNDEQFPLLQSFLGNSDSITLDVAVANNENVLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -