Snig008613.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- dnajc2
- Assembly
- GCA_958496155.1
- Location
- OY292315.1:27193890-27196207[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00086 0.78 10.1 0.0 3 34 502 537 500 538 0.85 2 2 6.1e-13 5.6e-10 39.4 0.1 3 44 622 667 620 669 0.91
Sequence Information
- Coding Sequence
- atgcCGACTGTAATTATCTTAGACGTCTCACTATCGATGATTCAACCTGTTATCGTCCCCGATGCCAATGAAACCGACAAAGACTACGTTTGCTTAAATCGGCACAATTTAGCAGTCCACGGCATTAACGTTTTCCTCGACTTCTTGGCAAGCCATGCCAAACTTGAATTCGTCTCTTTGGTTTTGTACGTGTGCTGTGAAAAAATGAGTTCCCTCGCAATAAAACAAAGCCAAACGCTTCCGTTGAACATTTCGACATCATTAGTATCAGTCGAATGTGTCGGAACCGTATTTCTGCATTATCTTCGTGAAAGTGGAATCTTCGATGGACATGTGATCAATTTGAATGAAGACGAGATCGAGGAAGTTAGCGAATCAACCGTCTTCGAGGATGATATCGACTATCTTCGAAGTCTCGATCCGAAAGATTGGAAAAACCAAGACCACTATGCTGTCTTGGGTTTGAAAAATTTGCGATTCCACGCGACAGACGATGATATAAAACGTGCATACAGACAGAAGGTGCTCAAGCATCATCCTGACAAACGGAAGGCTCAAGGAGAAGATGTTCGAACCGAAGATGATTATTTTACTTGTATTACAAAAGCATATGAAATGCTTGGAGTCCCTAATAAACGTAGATCATTCGATTCGATCGATCCAACCTTTGATGATTCCCTTCCGACTTCTGAAGAAATCAAAAAGGACTTCTTTAAAACCTTCAATCAAGCATTCGACTTAAACTCAAGATGGTCCGAAAAGAAAAAGGTTCCCAAACTTGGCGACGAGACCACATCTCGAGAGGACGTTGAAAAATTTTACTCCTTCTGGTACGATTTTGAATCATGGCGAGAATTTTCATATCTAgacgaagaagaaaaagaaaaaggcCAAGATCGAGAAGAGAGACGTTGGATCGAAAAACAAAACAAAGCAGCTCgtgctaaaagaaaaaaatctgaaaTGACCCGAATTCGAAACTTGGTCGACTTGGCGTACAACGCCGATCCTCGAATCGCCAAATTCAAACTCGAAGATAAAGAACGAAAACTGGCCGTGAAACAAGCGAAACGAGACGCGATTCAAGCTCGAAAAGATGAAGAAGAGCGAGCAGCACGTGAAGCTCTTCTCCTTAAAGAAAAAGCTGAGGACGAAGAAAGGGCTAGGAATGAGCTTAAAAAACAGGAGCGAGAAATTCAGAAGAAAGCTTTGAAAAAAGAGCGAAAAGCTCTTCGAGATTTTTGTAAATCGAATAATTATTTCAGCGAAAATGCTAATGATAACGTTACCAATATGACGATCGTCGAGAAGTTATGTGAAATGTTCAATCAGAtggaacttgaaaattttaacaaagaactTCAAGAGGGTGGTCGGGAAGCTTTCTTGAAAGCCAAGGAAGATTTGGAAAAGAAGCTGGAAGAGGAACGTAGAGCGATGATGCAGCAATCAAAGACTGCATCAGTCGTTGAAAATAAGGATCCAGTTCAAAGTGAAAGTCCTAAATGGACGACTGAACGAGTTCAGCTTTTAATTAAAGCCGTTAATATTTTCCCAGCAGGAACCAATCAGCGATGGGACGTCGTAGCTAGTTTTATCAATCAACACTGTGACTGTACCAACATTTTCACTGCTAAAGATGTTCTGGCCAAAGCCAAAGACATGCAAAAAACCGATTTTTCACGAAATAATCTCAAATCCGATTTAAATAACCAAGCTTTTAATAATTTCGAGAAGAATCATAAAGCGTCCCGTATTGATGATGTGACCATAACTGAGAAATCTGATGAGCCGGTTACCAATGGACAAGCAAAGTCCGAGGCTCAACACGGAGATGGGAAAAAGGAAAAGGCAGAAGCGACCCCGTGGACACCTGACGAACAAAAGCTTCTGGAGCAGGCATTGAAAACGTTTCCTGTAACGACCGATGAACGATGGGATCGCATCGCCGAATGCATACCAAcacgaaataaaaaagaatgtaTGCGTCGATACAAGGAACTGGTCAACTTAATTAAAGCCAAGAAAGCGGCCCAGGCCGTCGTTAATCCGAAAGCTCAATAA
- Protein Sequence
- MPTVIILDVSLSMIQPVIVPDANETDKDYVCLNRHNLAVHGINVFLDFLASHAKLEFVSLVLYVCCEKMSSLAIKQSQTLPLNISTSLVSVECVGTVFLHYLRESGIFDGHVINLNEDEIEEVSESTVFEDDIDYLRSLDPKDWKNQDHYAVLGLKNLRFHATDDDIKRAYRQKVLKHHPDKRKAQGEDVRTEDDYFTCITKAYEMLGVPNKRRSFDSIDPTFDDSLPTSEEIKKDFFKTFNQAFDLNSRWSEKKKVPKLGDETTSREDVEKFYSFWYDFESWREFSYLDEEEKEKGQDREERRWIEKQNKAARAKRKKSEMTRIRNLVDLAYNADPRIAKFKLEDKERKLAVKQAKRDAIQARKDEEERAAREALLLKEKAEDEERARNELKKQEREIQKKALKKERKALRDFCKSNNYFSENANDNVTNMTIVEKLCEMFNQMELENFNKELQEGGREAFLKAKEDLEKKLEEERRAMMQQSKTASVVENKDPVQSESPKWTTERVQLLIKAVNIFPAGTNQRWDVVASFINQHCDCTNIFTAKDVLAKAKDMQKTDFSRNNLKSDLNNQAFNNFEKNHKASRIDDVTITEKSDEPVTNGQAKSEAQHGDGKKEKAEATPWTPDEQKLLEQALKTFPVTTDERWDRIAECIPTRNKKECMRRYKELVNLIKAKKAAQAVVNPKAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01349572;
- 90% Identity
- -
- 80% Identity
- -