Snig006486.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- DNAJC1
- Assembly
- GCA_958496155.1
- Location
- OY292314.1:44097042-44100364[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-06 0.001 19.3 0.0 4 38 298 335 295 336 0.86 2 2 3.8e-11 3.4e-08 33.7 0.1 3 43 381 426 379 428 0.92
Sequence Information
- Coding Sequence
- ATGGTTTCCGACAGTAAAAAATACatcttttatttattcttagtagcacaaataaattttagtttttgttggGATGAAGACGATTTAGTTATATTCGATTTGGTTGAGGAagtcaataaaaacttttactcGTTTCTAGATTTGCCTCAAGATGCCAATGCGACGGCGATACGGAAAGCCTTTCGAAGCTATTCTCTTATTTTGCATCCGGATAAAAACGATGCACCCGATGCAGAAATCCAGTTTCGTAATTTAGTGGCGATATATGATGTACTGAAGGATCCTGTGAAACGAGAGAAATATGATCAAGTACTGCAAAATGGTTTACCTAATTGGAAATCGGCAGTTTATTATTATAGACATGTTCGGAAAATGGGTCTCATGGAAATGTCGattattttgtttgttgtaaTATCAATTGGCCAATATATTGTTGCATGGGCTTCATATTTTGAACAGAAACTGACCATGgaatcgcaacgaaaaacaaaaattaaaaagggaCAGAAAAAAACGATGAAACAAAATGTGAGCAAGCAAGAGCCAGAGCCAGAGTATGAAATTTTgaaaccgagtttaaaaaatactttgccCATTCAAATTCCAAAGTTAATATTTACTACTATTGTTAGCGTTCCATTTATTATCAAAgctattttatcttttattgcCGAAGAAAAGGAGCGACGAAAGTTGAAGAAACAACAAGAgATTGAAGAGCTTGAAGAAATAGAAGAAAAGAAACTTTCCCAAGAAGTGAAATATCCTCGTAGAAGAAAACCTCAATTTGTCGTAGAAGAACGTAACTATGAAGACGAGGGATGTTTATTAGATCCTGTAGATGAACCACTTTCAAAAGAATTAAAACCACCACCCATCAGTGGAGGTTTTTGGAGTGACGATGATTTAGATGAACTGATTCGACTTGTAAACAAACACCCTCCAGGAACAACAGATCGATGGGAACGAATTGCCGAAATAATGAATCGGCCCGCTGCTGAAATCACATTCATGgcagcaaaaataaaaaacttatcgTTGAAACCGTCACCAAAAGCTCAGGAAAATCAAACAATTGTTGTTGAAGTACCGAAAAAagtgaaaaccaaaaaaaatgtcGAAGCCGAAGTTGCTAATAGTGCGTGGACACAAACACAACAAAAAGCATTGGAAAGTGCTCTTTCAAAATATCCGAAGGGATCGGTGGCAGATCGATGGGATAAAATATCGAAATCCGTTCCCaataaaacaaaagagGAATGTATTCTTCGATATAAATATTTAGCTACtataataaacaaacaaaaagcaaaTAACGAGACGAGcgaaaatctcaatgaaaacgAAACCAAGACAAGTGAAGAAGAACCaattaatagttaa
- Protein Sequence
- MVSDSKKYIFYLFLVAQINFSFCWDEDDLVIFDLVEEVNKNFYSFLDLPQDANATAIRKAFRSYSLILHPDKNDAPDAEIQFRNLVAIYDVLKDPVKREKYDQVLQNGLPNWKSAVYYYRHVRKMGLMEMSIILFVVISIGQYIVAWASYFEQKLTMESQRKTKIKKGQKKTMKQNVSKQEPEPEYEILKPSLKNTLPIQIPKLIFTTIVSVPFIIKAILSFIAEEKERRKLKKQQEIEELEEIEEKKLSQEVKYPRRRKPQFVVEERNYEDEGCLLDPVDEPLSKELKPPPISGGFWSDDDLDELIRLVNKHPPGTTDRWERIAEIMNRPAAEITFMAAKIKNLSLKPSPKAQENQTIVVEVPKKVKTKKNVEAEVANSAWTQTQQKALESALSKYPKGSVADRWDKISKSVPNKTKEECILRYKYLATIINKQKANNETSENLNENETKTSEEEPINS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01349573;
- 90% Identity
- -
- 80% Identity
- -