Snig002890.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- rcor2
- Assembly
- GCA_958496155.1
- Location
- OY292313.1:48596401-48614543[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-09 1e-06 29.0 0.0 3 46 130 173 128 173 0.97 2 2 4.7e-13 4.2e-10 39.8 0.0 3 46 382 425 381 425 0.98
Sequence Information
- Coding Sequence
- ATGGTGCTGGCTGAAAAAGGATCAGATAATGCAAGAAATGGACGCAGGTCGCGGGGGCCGAGCCCCAATGGACATGTCGCAGCAGAATCTACTAGTGATGAAGAAACTGTGCCCGTAGATAAAATACGAGTGGGTCGAGATTATCAAGCAGTTTGTCCACCGTTGCAACCTGTCGAGCTGAGACGACCAGAAACGTTACAAGATCGAGCTTTGCTTGTATGGTCACCCACTGTAGACATAGCAGAACAAAAATTGGACGAATATATAACGTTAGCGAAAGAAAAGTATGGATATAACGGCGAACAGGCGCTGGGAATGCTTTTTTGGCATAAGCATGACTTGGACCGCGCTATATTGGACTTAGCAAATTTCACTCCTTTCCCCGATGAATGGTCAGTCGAAGACAAAGTATTATTCGAGCAGGCGTTTCAATTCCATGGAAAAAGTTTTCATCGTATTCGACAAATGCTCCCAGATAAAACCATCGCTAGTCTTGTCAAGTATTACTACTCTTGGAAGAAGACTCGCACGCGTACAAGTCTTATGGACAAACAAGCTCGTAAATTGACCTCAACTCGAGACGAGGCTGCATCGGAAGGAGGCTCCGAAGGTGGTGGCTCTAATGAAGAATCTGACGCCGACGACAAGAAGTGGACAATCCACCGTGGAATACAACGTAAGAGTGGGTCTCCGCCTCGAGCGGGCCAAGCACCCACAGCAAATGCAACCAAACATCAGGGGGAGGGGGGCGTGTGTGGAAATTGTGGAGTAACCTGTTCATTAACCCACGTTTCAGCCAAAGGACAGCAGTTATGCCATTCATGCTTTCAGCATTGGAGACGAACGGGGGTAGCGCGCCCCACGTCGGGGCCTGGGGCTGGGGGCCGTAGTAGAGCTGGGGTTGGTAGCGGAATTCGCCATAAACGGCGACCTCCACGGGGAATGCACATCAACCATGATGATTTGGTAGCTATGGCTGCCGCCCCCCATGGTCAACTAATGCTTCGTGCCATGGATCGGGAAATTATTTCACTTAAGCGTCAAGTCCAAATCAATAAGCAATCAGTtagtattttaaagcaaaaaacaaATGAAGGCGTAGCCGATTTACGTCCAGAGTCCGATTCCAGTCGTATCAACGCACGTTGGACTCAAGAAGAACTACTGTTGGCCGTGCAAGGCATTCGAAAATACGGTAAAGATTTCAAATCTATTGCTGAAGTGTTGGGCACGAAAACCGAAACACATATGCGAAGCTTTTTCGTCAACTATCGGAAACGATTCAATTTGGATCACGTGTTAAAAGAGTATGAAAGCGAGCATGGCATTGTGAATTCGTCGACAAATGATATCGACGAAAAAATGGAAGTTGACAATCCGGATCATACTGAAGCAATGGATGTGATAGAATCAGCGGGCACACAACCGGCTACATCTTCAACCACATCAAATGGTTCCGTTAGTGTTATAAAAATCTCAAATCAAGCCCAAACTCAACCCACTAAATGA
- Protein Sequence
- MVLAEKGSDNARNGRRSRGPSPNGHVAAESTSDEETVPVDKIRVGRDYQAVCPPLQPVELRRPETLQDRALLVWSPTVDIAEQKLDEYITLAKEKYGYNGEQALGMLFWHKHDLDRAILDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKTIASLVKYYYSWKKTRTRTSLMDKQARKLTSTRDEAASEGGSEGGGSNEESDADDKKWTIHRGIQRKSGSPPRAGQAPTANATKHQGEGGVCGNCGVTCSLTHVSAKGQQLCHSCFQHWRRTGVARPTSGPGAGGRSRAGVGSGIRHKRRPPRGMHINHDDLVAMAAAPHGQLMLRAMDREIISLKRQVQINKQSVSILKQKTNEGVADLRPESDSSRINARWTQEELLLAVQGIRKYGKDFKSIAEVLGTKTETHMRSFFVNYRKRFNLDHVLKEYESEHGIVNSSTNDIDEKMEVDNPDHTEAMDVIESAGTQPATSSTTSNGSVSVIKISNQAQTQPTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01349571; iTF_00238843;
- 90% Identity
- iTF_01349571;
- 80% Identity
- -