Snig008126.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- Myb
- Assembly
- GCA_958496155.1
- Location
- OY292315.1:18556034-18561429[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-17 4.7e-14 52.4 1.1 6 46 3 44 1 44 0.96 2 2 2.5e-22 2.3e-19 69.4 1.0 1 44 50 93 50 95 0.96
Sequence Information
- Coding Sequence
- atgcgtcaagtggaAGATCAAAAAGTAATAGAACTTGTCCAGCGATACGGCCCGAAAAAATGGACTTTGATAGCCAGGCATTTAAAAGGGCGAATTGGAAAACAGTGCCGTGAACGGTGGCACAATCATTTGAATCCCCACATTAAAAAGACAGCATGGACTCCGGAGGAAGACAAGATTATTTATGAAGCCCATCATCAATGGGGAAATCAATGGGCACGAATCGCCAAACTATTACCGGGAcgaacgGACAATGCCATAAAAAACCATTGGAACTCAACAATGCGACGAAAATATGAAGTGGAAAGTCGGGGTCTGCCTAGAAAATCACGcatcaataataaattacgaGGTGACCAGAAACATAGTGGCTATGACTCTCGATATAATCAATCACATCATGATGGAGTTCCAATGAGTGGACTGAATGATGATTGGCCAGTTGAATTCTATGAACCTACAAGTAGCCAATCAAGCATTGGAGGATATTCAGAAGCGACTCCAAGTCCAAGTCCATTAACGCCATCACAAACACCCACGCCATTAACACAATCATATCCTCCTTATCTTGACAAAGAAAGTCAAGTTCGAGTGGCCACTAGCACAGGTGGCACTGAAGTTTTATCATCCTTTAAAATGTTGGAGTTGGAGATTTTAGGAAATCAACCAAGTCCTGTGAAGCTAACACCAATGACTGATGAAGGTGTTACTGAACTGAATGGAATTGGATATTATAGAGGACGACCGTACAACCAGAGTAAGCGGTCGTcgacaaataatttaaatcgttCCAGTTCACCACCTCCAATCTTACGACGTCGACGAAGAAGGAGTATAAATGATGCTTCAGATAGCCAAGAGAATGATTCAATAGAAATAACAGAAGTTGACAATTCGACGAATCGTAAAAGTACCCCAATCAAAGAGCTACCGTTCAGTCCTTCTCAATTCTTCAACAGTCCAAACCTGTCTTTTGATATAACATTATCTTCTACACCTGTTCGTGGTAATTCAGGGACACCGTCGAAAGACAAGCATTCACACAATACCGAATCGGCTAGTCCATTAACAACCCCCAAACCGCCAATGCTACGAGGCAATGCAGAGCGTTCAGAGCATCGAACTCCGaacaaatcaaaaatgttaGGCCCTCGCACTCCGACTCCATTCAAAAAAGCCATGGCTGAAATGGAACGTAAATCTGGTGTGTTAAAATATACACCCCAGACTCCAACTCATCTCGTCGAGGATTTGTCGGATATCATTAAAAAAGAACAGGAAGACATGTCGATTTCCTCGGAATCACATTACGATTCGGATCGTCCTTATCAACAGCACCAGGATAGTGGATATGCCACAACTAGTGGGAAGAGACGTACGCCACTTTTAGTGGGCAAAGAGAACGCACAGCCCAGTAAACGAGTGCGAAAGGCATTGGCGCCGTCGTGGAATTCAACACCCGTCTCAAATCCAGCAAACTCTTGTTCTGATATGTCGTTTATGGCCGAAACTCCAAGTAAATCTTTGGTCGGTGATAGTTCAGTTATGTTTTCACCACCGTCAATAATAAAGAATGCACTTGGGCCAGATGTGAGTCCGTTGGACGTGGCTCCATTAGCGAACGATTCTGCCAAGCAGCTGTTTCCTGGTCCTGGAACCCACGCAGCTAACGCCACTTCCAAGCGTAGGAGTTCGGCAGCTAAACGCATCACCTTTGGAGAGGCTTCGGGTCAGTTACGACCGCGGCCTAAGttGGATGTTGAATGGGAGATGGTAGCTTGTGGTCGAACTAAAGATCAATTAGATCTAACCAAATTGGCGCATCGTTTTCTAAATGATACAGCATTGAAGCCTCGATCGTTGAATTTCTAG
- Protein Sequence
- MRQVEDQKVIELVQRYGPKKWTLIARHLKGRIGKQCRERWHNHLNPHIKKTAWTPEEDKIIYEAHHQWGNQWARIAKLLPGRTDNAIKNHWNSTMRRKYEVESRGLPRKSRINNKLRGDQKHSGYDSRYNQSHHDGVPMSGLNDDWPVEFYEPTSSQSSIGGYSEATPSPSPLTPSQTPTPLTQSYPPYLDKESQVRVATSTGGTEVLSSFKMLELEILGNQPSPVKLTPMTDEGVTELNGIGYYRGRPYNQSKRSSTNNLNRSSSPPPILRRRRRRSINDASDSQENDSIEITEVDNSTNRKSTPIKELPFSPSQFFNSPNLSFDITLSSTPVRGNSGTPSKDKHSHNTESASPLTTPKPPMLRGNAERSEHRTPNKSKMLGPRTPTPFKKAMAEMERKSGVLKYTPQTPTHLVEDLSDIIKKEQEDMSISSESHYDSDRPYQQHQDSGYATTSGKRRTPLLVGKENAQPSKRVRKALAPSWNSTPVSNPANSCSDMSFMAETPSKSLVGDSSVMFSPPSIIKNALGPDVSPLDVAPLANDSAKQLFPGPGTHAANATSKRRSSAAKRITFGEASGQLRPRPKLDVEWEMVACGRTKDQLDLTKLAHRFLNDTALKPRSLNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01349568;
- 90% Identity
- -
- 80% Identity
- -