Snig007676.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- -
- Assembly
- GCA_958496155.1
- Location
- OY292315.1:7900586-7907317[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 4.4 4e+03 -1.8 0.1 3 18 177 192 176 193 0.86 2 5 0.0013 1.2 9.6 0.0 13 37 301 327 291 330 0.84 3 5 1.4e-09 1.2e-06 28.7 0.1 1 46 342 391 342 391 0.95 4 5 8.1e-15 7.3e-12 45.4 0.0 1 46 397 442 397 442 0.97 5 5 2e-12 1.8e-09 37.7 0.8 2 45 450 497 449 498 0.94
Sequence Information
- Coding Sequence
- atgttttcaaacatagaaaatataataaaaagtaatgTTGATGATGTTGAAAAGCTCAACCTCATCTTAAAAGTTGATAATCTTCGTTATGATGACAGCgatAACGAATCAGACAATTCCTCGAACGATGCAGCCTCAATATCATCTGAATTATCATTTCAACACGCACAAAACGTAAATTATAACTTTACGAGTTCTTCACCTTATGATGAACAAGTCGAACAAATAACTGCAACGTTCACAAACGAccatttaagtaaaattatattGTTGAACAAGGCTCAACAAAGCCTGTTACGGGAAGCAATAAACCATCATCGCACATTAATAGCCGACGttgacaataaaataaaaagtatttccgAATCAATAAAAGATCAGGCCGATGacacatcaaaaaaatatttcaattataaattcgGTTCTCCGTATTTTAAGGTCCGATCGTTTTGTTGTCCACACAACCAGGATAAATTAATCAAAGATAAAAACGGGGAATATAATCAATGTTATTTGCCGCCATCGGTCAGTTGGTTGGATTGTGAAAAGAAACTTTTAGTCAGTTACGTTCAGGAACAGTCAAAATTAATACGAGTGGGCCAATTAAGGGGACAAATCAAACAACTTACAAACTTAGTGtatacgaaaaataaaattcagaaTGAAGTCGAGTCAAAAATTCAAGAACTTACTAATGAAATCGCGCAATGGAAGCTTAAAGATCCTGCTGAGTGTGTTTTTCCAGTCAAAGATAAAACTGTTCCAATTGACTGGATGAAAATTGGGGTGTTGGGATTAAAAGGTAGACACAGTGATAATGAATATAAGGCAATGTGGTATTGTTGTCTTCATCCCGAACTGAACAATAGCCCATTCCCAAAAGGTGAGTTTGAAAAAATGTCGGATctcgttaaaattaataactttcaaAATTGGGATTTGATCGCTGACCAATTAGGCACAAATCGTTCTGGTTATATTTGTTGTTTAATCTATCACATAAGCCAATCGAATCgatacaaaaaatcaaaatggacGCCCGAGGAGGACGCCTATTTATTAGAACTCGTTGAAAATTGCCGCGTTGGCAATTATATTCCATGGAATAAAGTGTCGTATTTTATTAGAAATCGAACTAAAGCTCAAATTTATATGCGATATTGTTATCATTTGGCGACTGATATAAGAAAGGGTAGATTTAGTAAAGCTGAGGATTTATTGTTGTTAATGTTTGTGAAAAAGTTTGGACCAAATTATTCGAAAATAGCGACGTATTTACCGAATCGAACGTCGGTACAGGTTCGAGAACGATATTTGAACTGTTTGCAGTACGAGGGGAAAACACAGGGCGAATGGACCGTGGCTGAGGAtacacaaattgaaaatttcgtcATGAAACACGGAGATAAAGCTTGGGCTGATCTCGCGTCgaaattcaaaagtaaatataatCGAACTAGAAATAATCTTCGACATCGATGGAAAACGCTTCAAAAATTTCGTCAAACCTATCCAAATGCCTCGATTGAAGATGCACCTCGACGCAAAAAACGAAAAAGATTCAACATTGCTAAGCATGATGATGTTGATAATGTGATTGATATTTTAGGATCGAAAGACTTAGAAAACTCTGAGTcacaaataaaagacaaaaaattacGTCTAGAAACTTATAATTTAAGTGCTGTTTCGGGCGTTTTAAGCACGACTCAAGAAATTGAACCATTTTTTGCTTCCGATAAATTTATTCTACATATCCACACAACTATACGAGGCACTTTTCTCACGCAGGAATTTTCGCAGACGTCggttttagatttatttttcatcttACAAATCATAAATGGCCGAATCAATATTCCAgcaaattttaatgatataaaCGGCTACAAATATCTAAAGccgtttgaaaaaaaagttttggctGAAGTCAAACATTTTTCACTGGCACTGAGCAAAAGTTCCAGCGTTTTTACCGATTTCATAACGAAATGTTACGATGAAAACAATGCTCAACTAATTTATCCAGACAACAATTTGCTCCAGTTCATTCCACCATTCTTACAAAGCGTCTCGAATTTTGATCAAACTTTACTTCACTGTAAagtagtattaaaatatttaacatggcACAAATCGCCACTGAGCGGATATTTCGAGAAAAAGGGTGGTCGATTTTTAAGGATCTATAAAGGATATTTATCTGACCCCAAATCAGAGTTAGttcaaattgaagaaaatattaaaaaaacaattaaaacacaACCGTGTAAGGCACTATTAACATGTAAAAATTGTTCAACGTTACGAAAGCTTTTGTCGACGGACGAGTTTAAAAAACGATTGTTGACGTTCGTTTCGTTACCGGCAATGGAACCTTTTGTGGATAAATTAAATACAGAAATTGATGATATTGTAGAAAACCGGAGCACAGATTctacaaaaatattcaaaaatgtaGCACCGCTTAGGAAAAGAGGACGacctaaaaaaaagaaagtttaa
- Protein Sequence
- MFSNIENIIKSNVDDVEKLNLILKVDNLRYDDSDNESDNSSNDAASISSELSFQHAQNVNYNFTSSSPYDEQVEQITATFTNDHLSKIILLNKAQQSLLREAINHHRTLIADVDNKIKSISESIKDQADDTSKKYFNYKFGSPYFKVRSFCCPHNQDKLIKDKNGEYNQCYLPPSVSWLDCEKKLLVSYVQEQSKLIRVGQLRGQIKQLTNLVYTKNKIQNEVESKIQELTNEIAQWKLKDPAECVFPVKDKTVPIDWMKIGVLGLKGRHSDNEYKAMWYCCLHPELNNSPFPKGEFEKMSDLVKINNFQNWDLIADQLGTNRSGYICCLIYHISQSNRYKKSKWTPEEDAYLLELVENCRVGNYIPWNKVSYFIRNRTKAQIYMRYCYHLATDIRKGRFSKAEDLLLLMFVKKFGPNYSKIATYLPNRTSVQVRERYLNCLQYEGKTQGEWTVAEDTQIENFVMKHGDKAWADLASKFKSKYNRTRNNLRHRWKTLQKFRQTYPNASIEDAPRRKKRKRFNIAKHDDVDNVIDILGSKDLENSESQIKDKKLRLETYNLSAVSGVLSTTQEIEPFFASDKFILHIHTTIRGTFLTQEFSQTSVLDLFFILQIINGRINIPANFNDINGYKYLKPFEKKVLAEVKHFSLALSKSSSVFTDFITKCYDENNAQLIYPDNNLLQFIPPFLQSVSNFDQTLLHCKVVLKYLTWHKSPLSGYFEKKGGRFLRIYKGYLSDPKSELVQIEENIKKTIKTQPCKALLTCKNCSTLRKLLSTDEFKKRLLTFVSLPAMEPFVDKLNTEIDDIVENRSTDSTKIFKNVAPLRKRGRPKKKKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -