Snig015228.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- Mblk-1
- Assembly
- GCA_958496155.1
- Location
- OY292317.1:39430080-39432488[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-18 4.7e-15 55.2 0.1 1 45 11 56 11 56 0.96 2 2 1.2e-18 1.4e-15 56.9 0.0 1 43 409 452 409 454 0.95
Sequence Information
- Coding Sequence
- ATGTCGGCGGTGGCTGGACGTCGCACCTACACCGAGGAGGAACTCCAAGCGGCACTTCGCGACATTCAGTCTGGCAAATTGGGAACACGTCGTGCTGCTGTCATCTACGGAATTCCACGCTCGACACTCCGCAACAAAGTCTACAAGTTGGCGATGGAACGGGAACGTGAAAGCCATCTGCTGTCCTCAGCCCCGGTCAAACTTGAGGACGACGACGTTGGCGACGACGACAAAGAACTGTCCGGTGCTGAAGAGGAGAAAGAAGTCGAAAAAGCCCTACAAAAACCGATCCTCTCAATGGAGGATATTCTACGATTTTCGAATTTAGAAAATCAAACACCCGAcggattgaaaactttgttACAAAAGAGTGGCAAAGAGAAGCCTGATCCCTGGGCTGGTATGGAACATAGTAGTCTCGGACCGTATATACAGACGTTGATTCGTGCAGGGTTATcgccgcatcaaaaactagACGACTTAAATGCCGTGTTGCCAGAGTTTGTGCGAAAAATACTCGCGGAAGACATGGTCGAACAGGGCCAATCGGAACATTACGGGAACAATAAGAATGGCACGAGCCACGAGCGTGCCACGAACAGTTTGTTATCGCGCCAGAACTCGGCCAATTCGGTGATAAATCGTGCATCGCGAAAGTCAACCACACCGGACGTGATGGACACGGAGACAAACGACTCTTCGACACAGCCACAGACCAGTGATTCGCCTTCTAATGTGATACTCAAAATTCCGTCCTTCAAACCGACAACCAGCAAGAACGGGGGCGATCTATTCCGGCAAAGTCCCGGACTGCTCGATCCGATGCAAACGCCTCTGAACGTCACGCCGCCGATCGGTGGCGCTGGTAACGACTCTACCTCACCTCCCATCATGCCCTCGAAAAGTATCATGTCACTGAGGGACGTAATCGCAAAGAGTATCAGCCAAAAGTTCCAACAGTCCTCACCCAGTGAACAGCTGGCAATGAAAATGACTCCGCCAATCTCGGAAATCGATTTCAGTTCGTATAAACGTGGCCGATTTACGCCACCAATGGGTAACATGTCGGTCATCAAGAATCACCAGGAGTCCCAGCATCATCACTCAAGACAATTTCCTCATCCCCCCAAACCGCAGAACAACTCGCAAAATAACAACAATGCACCATCACAAGGTAGTGGTGGTAAAGGAACGCGACCAAAACGTGGAAAATATCGAAATTACGACCGAGACAGTTTAGTCGAAGCGGTTCGAGCAGTTCAACGTGGTGAAATGTCCGTACATCGAGCTGGAAGCTATTATGGAGTACCACATTCAACTCTAGAGTATAAAGTGAAAGAACGACACTTGATGAGACCACGAAAGCGTGACCCAAAACCGACTGTCACCGATGAAAAATCTCTTCCACCCAAAGTTCAAGATCCAATTAGAAGTTCTGGATTGAATGATAAAAGTAAATCAGGATCTTTGAAAACACCTCAGAAGTATCCACCGACGTCTCCTAATGGTTTAAAAATGGGGCTGTATGATCCTAGTATGGCACCATTGGGATATAACCATGCTCCGTTTCCCTTTTGGCCACACGCTCCGTTCCATCCGATGCCAATAGCGTCGACGTCCGGATTTGCCCCTCATCCTGAGTTGTTTGCCACGCAAATGATGCAACGACTTCAGGATAACGTTCAAAATGTCGCGTCACCTCCACAAGCCAATACTATAACATCCCCAACACTTGCCACTGCAACTCGGGAGATTGCCGAGTCGTTGTATGACGGCACCGGGGCAAATGGTACATTTCTCGATGGAATCATAAGATCGAGTCTTGAAATGGGAATTCCAGGAAGTAGTAAAAAAGGGGATGAGAAAAACTCTACACCTGAAACGATGAGTAACAAAGCGTTACTGGATCAGTTATGTCGAAGTAGTCGAATCGCTCCCAAGACGAACTTATTGGATGCACAAAGTTCCGGGGATGAAAGTGGTTCGTTTAACTCAAAACGGGCGCATAGTCCACTGAACTTTTCACGTGAGTATTCCGATGGGAAGGGGAGCGACGGTGCGTTAAACTTTTCGGGATCGAAAAAGCGGAGTTCGAGCGATGTGGTTGACATGTCGAATGACTCGAACGATTCGATGCCGGCGCGCAAACGGAAACATTCCGTCGACAATAACTATTCGGAAGGTGAGCGCTCGTCGACGACGAGTCCCACGCCCGTGTCACGGATCTACGTCAAACCTCAGTTCCAGGAAATCACGAAACCTGAAAATCTCAAGCCGGAATCGCTGGTGCGATACGGCCGCAGTATGCGTGACGTCGACGACTTTGTCGCGTCCGACCAAAATGGCATTAGCAAAGAGACTGCTGACAACAATGAAAGTGCCTCGAAACCTGAAGCGGGCCAAGACTGA
- Protein Sequence
- MSAVAGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERESHLLSSAPVKLEDDDVGDDDKELSGAEEEKEVEKALQKPILSMEDILRFSNLENQTPDGLKTLLQKSGKEKPDPWAGMEHSSLGPYIQTLIRAGLSPHQKLDDLNAVLPEFVRKILAEDMVEQGQSEHYGNNKNGTSHERATNSLLSRQNSANSVINRASRKSTTPDVMDTETNDSSTQPQTSDSPSNVILKIPSFKPTTSKNGGDLFRQSPGLLDPMQTPLNVTPPIGGAGNDSTSPPIMPSKSIMSLRDVIAKSISQKFQQSSPSEQLAMKMTPPISEIDFSSYKRGRFTPPMGNMSVIKNHQESQHHHSRQFPHPPKPQNNSQNNNNAPSQGSGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPTVTDEKSLPPKVQDPIRSSGLNDKSKSGSLKTPQKYPPTSPNGLKMGLYDPSMAPLGYNHAPFPFWPHAPFHPMPIASTSGFAPHPELFATQMMQRLQDNVQNVASPPQANTITSPTLATATREIAESLYDGTGANGTFLDGIIRSSLEMGIPGSSKKGDEKNSTPETMSNKALLDQLCRSSRIAPKTNLLDAQSSGDESGSFNSKRAHSPLNFSREYSDGKGSDGALNFSGSKKRSSSDVVDMSNDSNDSMPARKRKHSVDNNYSEGERSSTTSPTPVSRIYVKPQFQEITKPENLKPESLVRYGRSMRDVDDFVASDQNGISKETADNNESASKPEAGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01349550;
- 90% Identity
- iTF_01349550;
- 80% Identity
- -