Snig007651.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- kn
- Assembly
- GCA_958496155.1
- Location
- OY292315.1:7134808-7158510[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-144 3.3e-140 468.4 0.0 177 386 29 246 20 249 0.98 2 2 1.3e-11 1.4e-07 30.4 18.4 417 566 255 427 247 431 0.67
Sequence Information
- Coding Sequence
- ATGACAGCGAAGAAGGAGTCGATCTACATAATATATGGGACACCGCAAGACGTTGCGAATGCGGCAGTCTTCGCAAGTCAAACTCCTGTCCTCAAACTAACGAAatTTTTCCTGAAATTTTTCCTAAAATGTAATCAAAACTGTTTAAAAAACGCCGGGAATCCGAGAGATATGCGGCGATTTCAGgTGGTGATAGCGACCCAAGTAGCGGTGGATGGCCCCCTTCTAGCCATTTCCGACAACATGTTTGTTCATAACAATTCGAAACATGGTCGACGAGCTAAAAGACTGGATCCCGCGGAAGGCTTGTATCCACCTTTACCGGTCGCAACGCCTTGTATCAAGGCAATCAGTCCCAGCGAGGGATGGACGTCAGGTGGTTCAACTGTTATAATTGTTGGAGACAATTTCTTTGACGGGTTACAAGTTGTCTTCGGTACAATGCTGGTTTGGAGTGAGTTAATCACACCACATGCGATCAGAGTACAAACACCGCCCCGACATATTCCTGGTGTTGTTGAAGTCACGTTATCTTACAAGTCGAAACAGTTCTGTAAAGGCGCTCCTGGTCGATTTGTTTATGtttCTTTGAACGAACCAACGATAGATTATGGCTTTCAACGATTACAAAAACTTATACCTCGACATCCGGGCGATCCTGAAAAACTACCAAAGGAAATTATATTGAAACGAGCAGCCGATTTAGCCGAAGCTTTGTATACGATGCCTCGAAATAATCCGTTATCGGGGCCTAGATCTCCCTCAATGTCTAATAATGGTATGACCACCGGATTTAACACCTATACTGGCCAATTAGCTGTTAGTGTGCAGGACTCCGGAAACGGTCAGTGGACTGAAGAAGAGTACGGTCGCGGGCAGAGTAGCAGCGTGTCGCCTCGTGGGGGTGGTTACTGTTCAAGTACCTCCACACCGCATTCCTCAAACGGGGGAGGCTCATATGGAACAGGCGCTTCAAATACGGGAGGGTTAAATGGTTACGGAGGATCCACACCAAGTAACGGATCGCAACTAGGAAATATGACATTGCCGGGTTCACCTGCCGGCGGTCTTTTTAATTCTGCTTCACTTTCCCCTGAAACGAGCCATTGTTTTGGTTTGCCATATTCTAGTTCAGGGTCCGGGGTTACAGGCGCAACGTCGAATGAAAGCGTTCAAATGCATGTTGAAGCGGTGGATGCCAAGCAAGCTAGGGCTGTTGAGAAAAGTGCATTTGCTCCTGTTTTAAGGATATCTAATAACATAAGTCAGTCTCAAACCCGCACGTTGCAACCCCCTGGCCCTGCACATTTTCATCACCAACCAATGACAGGTTGGCATCATTTAGTTGTGCAatgttag
- Protein Sequence
- MTAKKESIYIIYGTPQDVANAAVFASQTPVLKLTKFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPAEGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYTMPRNNPLSGPRSPSMSNNGMTTGFNTYTGQLAVSVQDSGNGQWTEEEYGRGQSSSVSPRGGGYCSSTSTPHSSNGGGSYGTGASNTGGLNGYGGSTPSNGSQLGNMTLPGSPAGGLFNSASLSPETSHCFGLPYSSSGSGVTGATSNESVQMHVEAVDAKQARAVEKSAFAPVLRISNNISQSQTRTLQPPGPAHFHHQPMTGWHHLVVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01349416;
- 90% Identity
- iTF_01349416;
- 80% Identity
- -