Snig003816.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- Kdm5
- Assembly
- GCA_958496155.1
- Location
- OY292314.1:295330-298275[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-15 1.9e-11 44.4 0.1 3 89 95 179 93 179 0.90 2 2 3.7 7.7e+03 -2.4 0.0 53 84 689 723 679 725 0.71
Sequence Information
- Coding Sequence
- ATGTCGTCAGAATCGTCCAATGAAAGTAGCGAGTGTGATAGCAGCCGAAATATTTTCATTCCACCACCGGAGGCACCGACATTATATCCGACACCTGAAGATTTTGCCGATCCAttagaatattttgaaaaaatcatagCGATCGGCATGCAATATGGCATTGTGAAAATAGTTCCGTCGCAGCCCGAATGGAAAATGTATATGGCTCTTAATATTGACAAGGTGTGCTTTAAAGTGCGCAGACAAAAGCTCTTTGAACTCGACGTGGATAATCGCAGTGCCAAATCATATTGTGAAAAGTTGACTCGATTCTGGACAATGCACTCGCAAGATCTCCAATCTCATGTCATCGAATCTGTCACGATTTCGTACTATCGACTGAAGTGCCTTGTTAATGAACATGGTGGTTTTGAGCAGGTCGAAAGAAACCAAGAATGGGATGTAATAGCGATggtgttacttgaaaaaaaccACGTGACGATTGAATCGAGAACGCAAATACGAGCTGTTTATTGTGATATTATTCAGCCGTATGAAAAGTTTATCAAATTACGACTGGATCGTCAGACGACTGAACAGGAGTTTCAAAAGATTTTTAGGCAGAAAGCTGAAAGTAATAAAACTGTTCAAATGCCAAGCTTTAATCGAGCGAGGAATGAAAGTTTCAACAATTCATTGTGTATGGTTTGTTATAAACAGGATGATGACGAGCGATTATTGATTTGTGATCGTTGTGATGATTATTATCACACATATTGTTTGATTCCGGCTTTAGAGGAAATTCCGTCGAACAGCTGGCTATGTCCTTTGTGTTGTATCAAGCCTCGAAAAAAATCCGAGGCCTATTCATTTGTGCAACGTGATTATGAGTATAAATTTGACACGTACATGCGTAAAGCGATCAAATGGAAATCACGTTATTTTCGTAGTGTGAACAGCGATGAGCTTACGTCGAATTTCATTGAACGTAAGTATTGGAGTTTGTTTCGTGATGAACAGCAACCCGTGGTCGTTGAATACGGCACGGATTTGCCGGCCAGCGATTTTGGCTCGGGTTTTCCAACGGCAGACTCGGAAAACTCGTCGCATCCCCTATACCAAGAAATGATGCAATCGAAATGGAACTTGAATAACTTACCCAAGTTGAACGGATCTGTGTTGCGATATTTACCTGAAATTTCAGGTGTGACCAGTCCGTGGTTGTATGTTGGAATGTGCTTTTCAACGTTCTGTTGGCATGTTGAAGATCATTGGTTGCCATCTGTGAATTATTTGCATTGTGGCGATATGAAAACCTGGTATGGAATTCCACCGTCGAGTGCCGAtaaatttgaaagttatttacGTACAGTGCATTCAGATTTGTTTGAGAATCAACCGGATTTGTTGCATCATTTAACGTTAATGGTGAATCCGAGGAAGTTAATCGATGCCGGCATTCCCGTGTATCGGTTAGATCAAAAAGAAGGCGAGTTTGTCGTCACGTTTCCACGTGCCTATCACGCTGGATTTAACCAAGGATTTAATGTGGCCGAAGCCGTAAATTTTGCTACGTTTAGTTGGCTACGTATTGGTCGTATGAGCGTTAAAAGCTACGTACTTATGAAACGAAAATGTGTCTTTTCTCACGATCGACTTCTCTACAACATTgttaaaaactatgaaaatatcGAAGAGAAATATATCTACGATGTATACATGAGCTTTCTAAACTTAATCAGTCATGAACATAAGTTACGTGAAGAACTCAGTTCAGTTGCCATCGAAAAACTCGATGATAATTTTCGTGAAAATGAACTGTCCGATTGTGAGATTTGTAACACGTCGTGTTTCTTGTCAATGGTGACCTGTGCGTGTATTAAGCATAGTTGTCTTGAACATTATAATCAACTTTGCTCGAAATGTTCGCCCACTGATTTTAGTATGAGACAACGCTTTTCAATGACACATCTCACTGAAATGATGTTCAATTTAATATTACGCAGTTCTCATTACAAGGCATGGCGAAATGATGGTCTCGAAATGCTCACAGCTGGGAAAATTATAACAACATTGAAAGACTTGGAAAATTGGATACGGATTGGCCGTGAAAAGAAATATCCCGATTGGCAAATGATCAACCAAATAGCGAACTATGTGGCCAATATTAAAAAGTGTTTTTCACGTATTTTTGTTGATGATCTAGAGTCAACGATTAAGTCGACGTGCACAATGGCACAATTGCATCAATTTGTGCGCCATTTCAATTCATATCCGTTTCGTTTAATCGAGTTTAAATATGCGTTTAAAATGTACCGTGCGTGCTTACAGTTTGAGAACATGTCGAAAGTAATCCTAGGTAAACGCATTAATTGCGTCAATAAGAAAGATTTGGAAGCAATGCTTCGACTCAAATCAAACATCAAACACATTCTTTTGCCGTCATATAAACGACTTAACGACCGACTGAAACAAATTATGTGGATCGAGGATGTGACCAAAGCGCTTAAGACACCTAAAGAGTTGTCGCTTGTTGCGCTGAATACGTTTTTCAATACTGGTTTGAGTTGGATGAGACAATCGCCTAACAAGGAACTGATTCAAACTATCAAAAAAAAGATTATGACCATTAAAAGTTGGGAAAAAATGGTTGCTGAATGGCTAAATGGTGAGACTGATTTCGATATATTGGCACTGCGACGTACAATTCGAAAGGGTCACGCTTCGGGAATGATATTACCGTCTATGTCAAAACTTGTTGAGCTTCGACAAAAATTGGAgcttttaaatcataaaaaggaAACATTGCCGTTTTTAAAAGACTATGCGTACGATAAAACGGTTAAATATCTAGTggatgaaacaaaaaaatcaatttgtattAGAAATGTGTTGATTGATGACGATGAGAGTATCCCACTTGATAATGATGAAAGTCAAGAAATAGAGGAGGTTGAAATGATTTGA
- Protein Sequence
- MSSESSNESSECDSSRNIFIPPPEAPTLYPTPEDFADPLEYFEKIIAIGMQYGIVKIVPSQPEWKMYMALNIDKVCFKVRRQKLFELDVDNRSAKSYCEKLTRFWTMHSQDLQSHVIESVTISYYRLKCLVNEHGGFEQVERNQEWDVIAMVLLEKNHVTIESRTQIRAVYCDIIQPYEKFIKLRLDRQTTEQEFQKIFRQKAESNKTVQMPSFNRARNESFNNSLCMVCYKQDDDERLLICDRCDDYYHTYCLIPALEEIPSNSWLCPLCCIKPRKKSEAYSFVQRDYEYKFDTYMRKAIKWKSRYFRSVNSDELTSNFIERKYWSLFRDEQQPVVVEYGTDLPASDFGSGFPTADSENSSHPLYQEMMQSKWNLNNLPKLNGSVLRYLPEISGVTSPWLYVGMCFSTFCWHVEDHWLPSVNYLHCGDMKTWYGIPPSSADKFESYLRTVHSDLFENQPDLLHHLTLMVNPRKLIDAGIPVYRLDQKEGEFVVTFPRAYHAGFNQGFNVAEAVNFATFSWLRIGRMSVKSYVLMKRKCVFSHDRLLYNIVKNYENIEEKYIYDVYMSFLNLISHEHKLREELSSVAIEKLDDNFRENELSDCEICNTSCFLSMVTCACIKHSCLEHYNQLCSKCSPTDFSMRQRFSMTHLTEMMFNLILRSSHYKAWRNDGLEMLTAGKIITTLKDLENWIRIGREKKYPDWQMINQIANYVANIKKCFSRIFVDDLESTIKSTCTMAQLHQFVRHFNSYPFRLIEFKYAFKMYRACLQFENMSKVILGKRINCVNKKDLEAMLRLKSNIKHILLPSYKRLNDRLKQIMWIEDVTKALKTPKELSLVALNTFFNTGLSWMRQSPNKELIQTIKKKIMTIKSWEKMVAEWLNGETDFDILALRRTIRKGHASGMILPSMSKLVELRQKLELLNHKKETLPFLKDYAYDKTVKYLVDETKKSICIRNVLIDDDESIPLDNDESQEIEEVEMI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -