Snig009596.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- Arid5b
- Assembly
- GCA_958496155.1
- Location
- OY292315.1:46222470-46238696[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-22 1.3e-18 67.3 0.1 1 89 284 369 284 369 0.92 2 2 4.1 8.6e+03 -2.6 0.0 20 35 644 660 638 660 0.76
Sequence Information
- Coding Sequence
- ATGCTTCAAGTgtacttattatatttatttatatttcattcaaTTGACTCAACCCACATAAAGCCTGAGGAAATCGCTTTAAAAgaTGAAGTTTTGGCCATTTCTGAAAAAGTGGTCCTTCGCGTTGAGGATCTACTGATGTGGATTACACAAGAGGCCGAATGGAACTGGGGTTTGCCATCGATTTGGAGCAAATCAGTACCGTCACCGCCGCCCGTTCCTATTAAAAACGAGGAACCAGATCCGTCCTCGGAAAATAGTGATCCGTTAGATCTAAAATATCCTCTCAACGATTACAAGGATCCATTGGCGGATACAAAACCGTTCATTTGTACTCGAAGAACAGCGCCAGCTTTAACTGATAGCTTATTAGATTTTTCCGATGTGGAAAAAGAGCGTAATATTttagGAATCGAATCAACGAACAAGGGAGTTGGAGTGATGGTGCTCAGTTATCCACGGTATTGCAGATACCGTGCTCTTATGAAACGCCTTGAAAGCGTCGAAGACAAATggttaaaaaattcaatcgtAGCTGCTCTCGGTGGATTCACATCACCATTTCGTAACACTAGAGTATTATTTTGCAAGGATACATTCGACTATCCTGATTTAGAAGGGCATGAATTGCTGTGCAATCATTTAGCACCGAAATTAAAAGGAAGACCGCGCGGCAAACGGAAAAAACGTAGCATTTCGCCGGGAGGATCCGAGTCAAATGAATCGGAATCCTCTGTTTCCACAGTTGCCGCAAGtgttaaaacTCGACTTACAACGGGAGGTCGAAATGGTCTTCGTTGTAACTCAACTTCATCTCCACGTCGCAGTACCCGATCTACTCAAAGTTCGGAAGAAAAAGAATTCTTTGCTAAACTTAATACTTTCATGAAAACACATCGAAATACAATTGGTCGACCTCTATCTTTGGGGTTAAAAGAAGttgatttatatcaattttatacaaaagtCCAAGAGTTTGGTGGATATGATAAAGTAACTGGTAATCGCCTATGGAAACTAATTTATGATGAATTAGGAGGACACCAGTGTAGTACAAGTGCTGCGACAGTAACACGACATTATGAACGTTTTCTGTTACCTTTCGAAAGAGCTCAACGTGGCGAAGAGCACAAACCTCTTCCAATTTCTGAGCGGCGTcgattaaaaagtaaaaaccataGTAATAGTGATACGGACAATAGTGAGGGTGGTTCAAGTGACCGAGGAACTCCAACTAAAAGCGAAAGTCCCGAAACAGTTCCATCCACACCAATCGATGCATCGAAGATGGCCCGAGTTGATTTGTGTCTTCATTTTGAATTTCGTCTTCTGATTCATTTTCAGGAGTTTGAATCATCTGATGTTGAATTGGCCACAGTACCTCATCTTCGTCCTCACTTTCAATGCGATCAGATGAGGGTGAGGTACGAAGATGAGCTTTTCACCATACCAGAGAAAATTAAATCGGATGGCAAAATGTCTTCGTTGCGAAGTGTTCGAGTTAAACCCGACCGCGTTCGAGACTTTTCGAAACAAGACAAAAGTCCGACCACAAGTAATTGTTCGACCCCGGTGCCATCATCGGTTCCCAATTCTCCAGGATCAAACGCATCACCGATTGGAATCACACCGATCACACCTGCAAAATCACCCACTGAACAATTACCCCCACCCACTGTGCCAATTAGCATTCCTTCAAACGCGACATTAAAAGATCCATCGTCGATTGTAGCCGATAAGCCATTAACAGAAGACGCTTCAACGCCTCCACAATCAACCGTTGATGTCACCAACAAAGAATATGCTTCAACCGACCaaagcttaaagaaaaatgaaacCATCGAAGAAGACGATGATGAACTCGTGGAAATACCATACAAACCTAAGACACCTGAAATAATTGAATTGGAAGACGATTCGCAATCGTCACTAAGTCCACAAGTTCCAGAAATGAAAAAGCGAAagttagatattttaaaagagGGTGGTCTTGAAGTTACGCCCATTTCATCTCCATTAGAAATAATTCCAATAAGTTCCGAACCTCGACCGTCTGTAATTCATCATTTTAATGTTCCTCCGGAACCGGTTCGAGGCGTTTCGATCACAGTTAGTACAGATGCGGGACGGATGTTACCACCAGCTCCTGGTCTTCGTCCACCTTCGAGACACTTACCAACCCCTGATCTAAGTGTCCATCATCGTCGTACTAATCCACCGTCTAAAACTCCAAATGTTTCATCAAATACTTTATACAATAACGGCCAAGTTCCACCTCGAGTTATTCAATCTCGTTCAATTTATAGTCACTCAGAAAAAACGGTTTATGGAAATCCAAAGGATACGTTTATGGCACCGCCACCAAGTTCGCAAGTTCCACGACACGTAATTCCAACAATTAATAAACCACCGGGTGGAGAAGTTCTTGATTTGACTGTGAAAAGTCCACAAAAGCCAGTCGTGGAAATAATGCGAGTACCTTCTGTGCCTTTATCCACTGCCTCCAGAGGCTACGCTCGAGAACAAGTCCCGAGTAAACCGAAAAATCCGGCCGGTTTACCGATGATTGATGGTCGAATTGTTGGCTCAAACCTAGAAATCACACTAGTGGGTGCACCCAAACCCACTCCCAAAATGAATGTACCTCCACAAAAATTACCGATTCCGGCCAATCACAATCGATACGTGCACAAGCGCACGTCTTCGGGTAAATTCATCCCGCAAAAACCAACGTCAATTAGATCCGAAAACGGAAAAGTCTCGAATCACCATAATATACCAGCGTCGTCAATGTCACATAGCCATCATAGAAATGGATCTACCTCGTCTAGTGCCAATTTAATAATTCCAACACCACAAACAAATAGTCGGTCAAGTGCTAAAATCGAAGATCATTCTCGCTTGAAACATAGTTCACATCCGAACAGTCCTAGTCCATTCCTGCCACCAGCAAGTCCACTCTACCCACCTTACTTACCTCAATTGCCAAATTCATCCAAACATCCATTCATGCCCATGTTGGATCCATCCCTGTACTATTCAGCACTCACCCAAGGTCTATATTCACATAGTCCTTTACAATTACCAACTGCTCCTCCCTTATTTGCACAAAGTGCTGAACAATTGCAACTTTACAAAGAACTAATCAATCAAAACCGAATGCGATTTCCATTTCCTCCCTATTTACAAGATAATCCTGGAGCGTTAGCTTCAATAGGACAAACatcaaataacaatttaaaaaattaa
- Protein Sequence
- MLQVYLLYLFIFHSIDSTHIKPEEIALKDEVLAISEKVVLRVEDLLMWITQEAEWNWGLPSIWSKSVPSPPPVPIKNEEPDPSSENSDPLDLKYPLNDYKDPLADTKPFICTRRTAPALTDSLLDFSDVEKERNILGIESTNKGVGVMVLSYPRYCRYRALMKRLESVEDKWLKNSIVAALGGFTSPFRNTRVLFCKDTFDYPDLEGHELLCNHLAPKLKGRPRGKRKKRSISPGGSESNESESSVSTVAASVKTRLTTGGRNGLRCNSTSSPRRSTRSTQSSEEKEFFAKLNTFMKTHRNTIGRPLSLGLKEVDLYQFYTKVQEFGGYDKVTGNRLWKLIYDELGGHQCSTSAATVTRHYERFLLPFERAQRGEEHKPLPISERRRLKSKNHSNSDTDNSEGGSSDRGTPTKSESPETVPSTPIDASKMARVDLCLHFEFRLLIHFQEFESSDVELATVPHLRPHFQCDQMRVRYEDELFTIPEKIKSDGKMSSLRSVRVKPDRVRDFSKQDKSPTTSNCSTPVPSSVPNSPGSNASPIGITPITPAKSPTEQLPPPTVPISIPSNATLKDPSSIVADKPLTEDASTPPQSTVDVTNKEYASTDQSLKKNETIEEDDDELVEIPYKPKTPEIIELEDDSQSSLSPQVPEMKKRKLDILKEGGLEVTPISSPLEIIPISSEPRPSVIHHFNVPPEPVRGVSITVSTDAGRMLPPAPGLRPPSRHLPTPDLSVHHRRTNPPSKTPNVSSNTLYNNGQVPPRVIQSRSIYSHSEKTVYGNPKDTFMAPPPSSQVPRHVIPTINKPPGGEVLDLTVKSPQKPVVEIMRVPSVPLSTASRGYAREQVPSKPKNPAGLPMIDGRIVGSNLEITLVGAPKPTPKMNVPPQKLPIPANHNRYVHKRTSSGKFIPQKPTSIRSENGKVSNHHNIPASSMSHSHHRNGSTSSSANLIIPTPQTNSRSSAKIEDHSRLKHSSHPNSPSPFLPPASPLYPPYLPQLPNSSKHPFMPMLDPSLYYSALTQGLYSHSPLQLPTAPPLFAQSAEQLQLYKELINQNRMRFPFPPYLQDNPGALASIGQTSNNNLKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01349411;
- 90% Identity
- -
- 80% Identity
- -