Snig011927.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- ATF2
- Assembly
- GCA_958496155.1
- Location
- OY292316.1:30204590-30209752[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-10 1.5e-07 31.5 1.2 2 51 336 385 335 387 0.96 2 2 0.023 22 5.4 0.6 41 61 389 409 385 411 0.79
Sequence Information
- Coding Sequence
- ATGAATGCTCCTGATAAACCCTTCGTATGTACAAGTGAGGGTTGTAAAATGTCTTTTACAAACGAAGATCATTTAATGGTCCATAAAAAAAAGCATGACATGAATCTAAATCTTGGCCTCGGCCAGAAATCGAACATCTTCGTTGCCGATCAAACACCGACTCCAACGCGTTTTATTCGTAACTGCGAAGAGCTAGGTCTATTCCAGGATCTCCAAAACGTCAATCCATTTGAAGAAACTTTTCGTCAGGCCACCGAATTGGTCAAATCGGGACATCTTCCAACTCCCGAAATTTCCACGGATGACACTCTTCATACACCACACGTATTCCCTATTATCAACGAGGATTTCCACAAGAAACGTTCAGTTTCACCCCCAACAAAATTAAACCCCGAAGATGATGAACTTAAAACTCCGAATATCCTCAAACCCGACGTCAAAGAATACACCAATGAAAAGGAGAAAGTACCGGATATTAAAACcccattaattttaaaagaaaatactctCGATGAGTTATTCAGAAGCAAGAGAAACGAAGAGCCTACTTTGAATTCGAATCTCTTCAATTTTGCGAAAGAAAGAATGCAAATTGGGGATATTAAAACAGTTCCTATTTGTCCCGATAAACCTGAAACTCAAAGTCGGGAAGTAATCAAACAAAAGGTCAAAGAAGCCATAGCAAAAAACCAAGCTCGCTACAATAAACAACCCGTTTTACGAACGGTAATTCCTTCGATCGAACCAAAAGTCGTAATCCCAAATGTCGTTAACACAGTACCAATTAATACAATGGTCTCAAATCCAATTATTCTCAGCCCGCCCTTTGTTAACAGTGGAGTTCAAACCATTACATTTCTTCCAGTTCAAACATTCATTCCAAAAGTACAACTTCCTATTAATACTTCTGGTATAACCGAAAAACTTGTGGAAGCACCACGAAAGAAGAGCACCagtaaaatcaaaaaacaaactACAAATAATATTAGCGAAAAGAATAAAGTGGATGAGAAACGACAAACGCTTCGTATACGAAATCGTGCGGCTTCATTTCGGTCTCGAAACAAACGAAAGGTTTGGGTGGATAATTTGGTGCAAGAGAACGATAATTTAACGAAGTGGGTCGATAAGTTGATCAAAGAAAATGATAGTTTAGTGCAAATAAATATGTCTCTTAGTGAAGAATTGGTTCGATTAAAAAATGAAGTGAAACAGCTTAAAGCAGCGGTTCCAGGTCAAAAAATTGAAGAATCAGAGGATGTTAGTGTAGAGAAATTACCAGGAACATCAAATAATAagAAACCCGCATCGACTTTTATACCTGCATTCCAATTGAATGTTTCTCAAACACCAACACTTACGGTACCTTTTAAACGTGATAACGAAATCGTTCCTAAAGTTccaataaaacgtttaaaaccCAATGTAAAGCCGCTATCAATGCCAAAAATAGCAATCACAAAATCCGCCACGATTCTACCAATCACAATAAATCAACGACCAAAAGTCATCATTGAAAAACCCAAGAAAAGAGTGGAGAAAACACCAATCAAAGAGAAAAACTCTTAA
- Protein Sequence
- MNAPDKPFVCTSEGCKMSFTNEDHLMVHKKKHDMNLNLGLGQKSNIFVADQTPTPTRFIRNCEELGLFQDLQNVNPFEETFRQATELVKSGHLPTPEISTDDTLHTPHVFPIINEDFHKKRSVSPPTKLNPEDDELKTPNILKPDVKEYTNEKEKVPDIKTPLILKENTLDELFRSKRNEEPTLNSNLFNFAKERMQIGDIKTVPICPDKPETQSREVIKQKVKEAIAKNQARYNKQPVLRTVIPSIEPKVVIPNVVNTVPINTMVSNPIILSPPFVNSGVQTITFLPVQTFIPKVQLPINTSGITEKLVEAPRKKSTSKIKKQTTNNISEKNKVDEKRQTLRIRNRAASFRSRNKRKVWVDNLVQENDNLTKWVDKLIKENDSLVQINMSLSEELVRLKNEVKQLKAAVPGQKIEESEDVSVEKLPGTSNNKKPASTFIPAFQLNVSQTPTLTVPFKRDNEIVPKVPIKRLKPNVKPLSMPKIAITKSATILPITINQRPKVIIEKPKKRVEKTPIKEKNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -