Snig019123.1
Basic Information
- Insect
- Sisyra nigra
- Gene Symbol
- cnc
- Assembly
- GCA_958496155.1
- Location
- OY292319.1:25479082-25491088[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-17 3e-14 53.0 3.9 3 65 362 424 360 424 0.96
Sequence Information
- Coding Sequence
- ATGCCTATCCGGTCTTCTGGCCTCTCTCCCAAATCCACGTTGCCATTTATTGATGGAACCAACTTAGGTTCTGCTGTTGCGACTTCAATCAACCTCACAAACACGACGGAAATGATGAACGAGACCGGAGCTGCCGGAGCATACAAAATGGAAAACAACCCCCATGACATCATGTACTTTCCGAATTCTTCATCCGAAATTGGAAATGCCACGGATGGATTTTTCAATTCGATTTTGAACGAGGAAGATTTACAGTTGATGGACATGGCTATGAGTGAAGgtATGTATCCTATGCGAATGCTCGACGGAGGAGGAGGAGGTGGAATTGGGAATGGGACAATGACGAACACGTCTCGGATGGATATGGCAGCTGCTTCTGAGCGAATGGATGCTTCTAGTGATAGTGCTGTTAGTTCGATGGGTTCCGAACGTGTGCCTTCGTTATCAGACAACGAATGGGGCGATGCCACCTCAGACTCCGGCCATAATGCCGACCATTCTGGCCATTATGCCTTAGATCACACCAATAAATACCGACCATATGATTATAGCTATAGTCGACAACAAACGAACAACTTACTGGGATCGGACACGCGAAGAATGTCACCGGTTGCCCAGAAGAAACATCACATGTTTGGAAAACGATTTTTCCAAGATCAAACAACGAATCCACCAGCTGCCATAAAGTACGAGTATAATAATATCTCAGGATTGAATTCTGTGGATATCCGAAGTGGACAAccaATTGGTGGGTCATCACGTCCAAAAATGAACGATTTAAAGTTTCCATGCTCGATGGAGCCCAGTGGCCATATTCATTCTGGTCGTTCCGTTTTGGATCATATTCACCACAATCACACATACGGTCTCCCGCCAGAGAGTACGGGAACGATGCAACGACCAGTGTTTCGAGATAAGACTAAAGGGGGCAAATGTGAGGAGGAAACGCATTTAACGCGCGATGAGAAACGAGCACGGGCCCTAAACGTTCCTATGTCGGTCGATGATATTATCAATCTGCCGATGGACGAATTCAACGAAAGACTGTCCAAGTTTGATCTGAGCGAGCCCCAGCTCAGTTTGATCCGGGATATTCGACGACGTGGCAAAAATAAGgTTGCCGCTCAAAATTGCCGCAAACGTAAACTGGATCAAATCTTAAACTTAGCCGGAGAGGTAAAAGACATGCGGGACAAAAAGCATTGCTTGTTATCCGAGCGTGAGTTTATGATCTCGGAACTACAACGTGTCAAGGAAAAGTTTTCGCAGTTATACCGCCATGTTTTTAGGCATCTTCGTGATCACGAGGGAAACTTGTACTCTCCAAACTTGTACAGTTTGCAACAGTCGGCAGATGGCACCGTAATCATTGTTCCCAAGGGTAACGCGACAGAGCCGAAAGATCCACACAAAAAACCGCAACCATAA
- Protein Sequence
- MPIRSSGLSPKSTLPFIDGTNLGSAVATSINLTNTTEMMNETGAAGAYKMENNPHDIMYFPNSSSEIGNATDGFFNSILNEEDLQLMDMAMSEGMYPMRMLDGGGGGGIGNGTMTNTSRMDMAAASERMDASSDSAVSSMGSERVPSLSDNEWGDATSDSGHNADHSGHYALDHTNKYRPYDYSYSRQQTNNLLGSDTRRMSPVAQKKHHMFGKRFFQDQTTNPPAAIKYEYNNISGLNSVDIRSGQPIGGSSRPKMNDLKFPCSMEPSGHIHSGRSVLDHIHHNHTYGLPPESTGTMQRPVFRDKTKGGKCEEETHLTRDEKRARALNVPMSVDDIINLPMDEFNERLSKFDLSEPQLSLIRDIRRRGKNKVAAQNCRKRKLDQILNLAGEVKDMRDKKHCLLSEREFMISELQRVKEKFSQLYRHVFRHLRDHEGNLYSPNLYSLQQSADGTVIIVPKGNATEPKDPHKKPQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -