Salt025528.1
Basic Information
- Insect
- Siphlonurus alternatus
- Gene Symbol
- stc
- Assembly
- GCA_949825025.1
- Location
- OX463788.1:46745845-46786888[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.5 7e+03 -2.2 1.5 12 18 26 32 26 32 0.92 2 11 0.13 1.9e+03 -0.4 0.4 4 10 607 613 606 613 0.96 3 11 9.8e-07 0.014 16.0 18.0 4 19 626 641 624 641 0.94 4 11 8.9e-07 0.012 16.2 9.4 1 18 677 694 677 695 0.94 5 11 5.2e-07 0.0073 16.9 13.1 1 18 733 750 733 751 0.97 6 11 0.36 5e+03 -1.7 6.1 3 11 828 836 826 837 0.85 7 11 3.8e-08 0.00053 20.6 14.0 1 18 853 870 853 871 0.97 8 11 2 2.8e+04 -4.4 1.3 6 10 900 904 899 904 0.83 9 11 2 2.8e+04 -8.8 9.8 1 18 910 927 910 927 0.61 10 11 9.2e-07 0.013 16.1 10.7 1 16 964 979 964 990 0.81 11 11 4.1e-06 0.057 14.1 16.4 1 19 996 1015 996 1015 0.97
Sequence Information
- Coding Sequence
- ATGCTGCCTATTTCTGGTAATATCATGCCTAGCGTTGGACCTGTGTTGCCTAACCCGGGGTATCCAATACCCAACCCTGGTGATTGCACCACCTGCTTCATCAAGAGTGATTGCACCACCTGCTTCATCAAGAGTGATTGCACCACCTGCTTCATCAAGAGTGATTGCACCACCTGCTTCATCAAGAGTGATTGCACCACCTGCTTCATCAAGAGTGATTGCACCACCTGCTTCATCAAGAGTGATTGCACCACCTGCTTCATCAACAGTGATTGCACCACCTGCTTCATCAACAGTGATTGCATCACCTGCTTCATCAAGAGTGATTGCACCACCTGCTTCATCAAGAGTGATTGCACCACCTGCTTCATCAAGAGTGATTGCACCACCTGCTTCATCAAGAGTGATTGCACCACCTGCTTCATCAAGAGTGATTGCACCACCTGCTTCATCAACAGTGATTGCACCACCTGCTTCATCAACAGTGATTGCACCACCTGCTTCATCAACAGTGATTGCACCACCTGCTTCATCAAGAGTGATTGCACCACCTGCTTCATCAACAGTGATTGCACCACCTGCTTCATCAAGAGTGATTGCACCACCTGCTTCATCAACAGTGATTGCACCACCTGCTTCATCAACAGTGATTGCACCACCTGCTTCATCAACAGTGATTGCACCACCTGCTTCATCAACAGTGATTGCACCACCTGCTTCATCAAGAGTGATTGCACGGCCTGTGTCATCAAAAGAGAATTCGCAGCCTGTAGTCTCATCAAATATGGTCCCGTCTACTCTTGGACCCTCGTCTGTAGTGCAGATATCCGATGTACCATCAGCAGTGAGGGCACATCAAAAGGAAGAATGAGTCAAGGAGGCTGGGGACTCGGAAAGCCTGACTTCCATGGCAACATGCCTAATGGTTCCCGTGTTTCCTTCCAAGCTCCAAGAGGCACCCACACCGAGTCCAAGAATGCGGGACGACAGAAGCTGCTGGCGGAAACTGGCTCCTTACTTACGTCAATGAGTATTCAAAATCAAATCCATGACGAAGACGATGGAGCTGTGAAGTCGCCAAATCGTAAGACAAAGAACAACTATGGAGTTAGTCTACCCTGGCCACATGAGCAGCAGAACACTACCTTCCATCCAGCAGTGGGACCACGTGGCAACATGTCTGATGAGACTGCCTCTGGCTGTAACAATAACAACTTgggacGCACATTCTACCGGCCTACCAACCCTCATGAATACACTGACTACCATGGCATTCATCATGGAAATCATTCTCGTAATGAGTACATGTCACAACCAAGCCTTCAAGCCTCACAGGACGAAAAGCAAATGTACAAGAATGAAGATCATGCCTCCCAGAAAGCCAAGCTGCGTCGCCAGAAGCAGCTACCACATGAGCAGCAGCAAAATCAACAGCACGAACTGCCGTGTTATCAACAGCAGTTGACACGTGAAGAGCAACAGCCACGTAAACAGCTGAAGAAGCCACGCGAAAGCTACGCTGATAAAGTGAAAATggCCCAGAGAGATCTGCTAATGGATCAGCTGTTACGTGCCACCTACGAGTGTATGGTGTGTTGTGACTTTGTCCGTCAGAATGATGCCATTTGGTCCTGCTCAAATTGCTACCACATATTCCACCAAAAATGTATCAATCGTTGGGCTAAAACTATGGAGTCAGACCCAGACAGCGGCTGGCGTTGTCCCGGGTGCCAGAACGTGAATCATGGCAAGCCAGCCAGCTACCACTGCTTTTGTGGTAGGATGGAAAATCCCAGGTGGAACCGATATAACCGTCCCCATAGCTGTGGTGAGCTTTGCGATAAAACACCAATTCAGACCCTGATTCAGTGTGTCCACAAATGCTCCTTGCCGTGCCACCCAGGACCATGCCCGCCATGTCCTTCCTCCATTGCAAGgaGTTGCTGTTGTGGTAATGGCACGGAGTATACGTTTTGTGGAAACCCTCAAAAGTTTTTCTGCAAAAATAAGTGCCAAAAAGTTTTGAAGTGTAATATTCACATCTGTGATCAGCCTTGCCATGATGGAGACTGCAGGGTCTGCGAAGAAACTGTTGAACAAGTGTGTCGCTGCAAGAAAGTTTCTCGTACAGTACCATGTACATTGGAGAATCAAACAACATTTTCATGTGATAAAACTTGTGATAAAACACTTAATTGTGGTAATCACTTGTGTGGAGTTAAATGTCATGTTGGAGAATGTCGTCCTTGCGAGCTGCTTCCTGCTCTTCGTTTGAAGTGCCTGTGTGGACAGACCCTACTGAAGACCCTAATCAACTTGAAGCCTCGCACCTCATGCCTTGATCCGATTCCATCTTGCGGCAAACAATGCAACAAACTGCAAGGCTGTGGTCCCCCAGGCAGTGATCTACAAGCAGCCTCCCCAGTAATCAAAATAGAAATAACAATTTCCATCAAAGATTTGTCCAGACGAAATTGTATTCGCCACAAGTGCCTTGAAATGTGTTGTACTCTGGACGACCATATATGCCCCTTGGAGTGCAACCGCACCCTCAGCTGTGGACTGCACAAGTGTGGAAATCTGTGTCATCCCGGCAACTGCCCTGCATGTGAAAACACAAGCTTTGAGGAGCTACACTGCCGTTGTGGAGCTGCAACAATCTACCCTCCAGTCCCATGTGGTACCAAGCGTCCTGAGTGTTCAAAACCCTGCAACCGCGAGCATGAGTGTGGGCATTCTCCTCTGCACACCTGTCACGATATGCCAGACTGTCCGGCATGCTTTGTTTTCACTGAGAAGTGGTGCCACGGCAAACATGAGCTGCGCAAGAACGTGCCATGTCATCAGAAGGAGCTGTCGTGTGGCCTGCCATGTGGTGCTCAGCTTGCTTGTGGCCGCCACCGATGTGTGCAGGTGTGCCACAAGGGTGTGTGCCTGAAAGAAGGTCAGGTGTGCCGGCAACCATGTCCCACTGTGCGCCAGCTCTGTGGACACCCTTGTGCTGCCCCCTGTCATGATGGACCTTGCCCTGACACCCCGTGCAAAGAAATGGTAAAAGTGACCTGTGAATGCAAGCACCGCAGCGTGACTCGAAACTGCTCTGACAACGCCCGAGAGTACCAACGCATGACCACCTCCCTGCTGGCCTCTACCATGGCTGACTTACAGCTGGGACACTCTGTCGACATTGGAGACAAGCTCATGGGTCCCAAAGTCTGGAATGATGCTCTTAAATCcCTGGAGTGCAATGCAGAATGCAAGGTCATAGAAAGAAATCGCCGCATGGCCGTTGGTCTACAAATAAAGAATCCTGATCAAGGTCAAAAGCTCATGCCCCAATACTCAGAATTCATGAGAAAATGGGCAAAGAAAGATCAAAATTTTGTCCAAATGGTTCATGAAAAGCTTACTGAACTTGTAACCCTGGCAAAACAGTCTAAGCAGAAGTGTCGCAGTCAGTCGTTTGATGTGATGAATCGTGAGAAGAGGCAGTTTGTGCACGAGTACTGCGAACACTTTGGCTGCTCTTCTGTGTCTTATGATGATGAGCCCAAGAGGAACGTCGTTGCAACAGCCAGCAAGGACAGTTCGTGGCTGCCTAGCATGGGCCTTCTGGAGGTGATTCAGCGCAAAAGTGGCCACAGGAAAGTGCTTGCCCCGACGTTTGCCAAGTCTTCTCAAGCAGTTTCCCAGTCAATGCCTCTGAAACCAGCAGAAGCTGCAAGCCGGCCTGTGAACGGTGGTGCTGTCTCCTCATATATTCAAGCTGCTGGCAAGACCCCCAGCGGTCAGTAG
- Protein Sequence
- MLPISGNIMPSVGPVLPNPGYPIPNPGDCTTCFIKSDCTTCFIKSDCTTCFIKSDCTTCFIKSDCTTCFIKSDCTTCFIKSDCTTCFINSDCTTCFINSDCITCFIKSDCTTCFIKSDCTTCFIKSDCTTCFIKSDCTTCFIKSDCTTCFINSDCTTCFINSDCTTCFINSDCTTCFIKSDCTTCFINSDCTTCFIKSDCTTCFINSDCTTCFINSDCTTCFINSDCTTCFINSDCTTCFIKSDCTACVIKREFAACSLIKYGPVYSWTLVCSADIRCTISSEGTSKGRMSQGGWGLGKPDFHGNMPNGSRVSFQAPRGTHTESKNAGRQKLLAETGSLLTSMSIQNQIHDEDDGAVKSPNRKTKNNYGVSLPWPHEQQNTTFHPAVGPRGNMSDETASGCNNNNLGRTFYRPTNPHEYTDYHGIHHGNHSRNEYMSQPSLQASQDEKQMYKNEDHASQKAKLRRQKQLPHEQQQNQQHELPCYQQQLTREEQQPRKQLKKPRESYADKVKMAQRDLLMDQLLRATYECMVCCDFVRQNDAIWSCSNCYHIFHQKCINRWAKTMESDPDSGWRCPGCQNVNHGKPASYHCFCGRMENPRWNRYNRPHSCGELCDKTPIQTLIQCVHKCSLPCHPGPCPPCPSSIARSCCCGNGTEYTFCGNPQKFFCKNKCQKVLKCNIHICDQPCHDGDCRVCEETVEQVCRCKKVSRTVPCTLENQTTFSCDKTCDKTLNCGNHLCGVKCHVGECRPCELLPALRLKCLCGQTLLKTLINLKPRTSCLDPIPSCGKQCNKLQGCGPPGSDLQAASPVIKIEITISIKDLSRRNCIRHKCLEMCCTLDDHICPLECNRTLSCGLHKCGNLCHPGNCPACENTSFEELHCRCGAATIYPPVPCGTKRPECSKPCNREHECGHSPLHTCHDMPDCPACFVFTEKWCHGKHELRKNVPCHQKELSCGLPCGAQLACGRHRCVQVCHKGVCLKEGQVCRQPCPTVRQLCGHPCAAPCHDGPCPDTPCKEMVKVTCECKHRSVTRNCSDNAREYQRMTTSLLASTMADLQLGHSVDIGDKLMGPKVWNDALKSLECNAECKVIERNRRMAVGLQIKNPDQGQKLMPQYSEFMRKWAKKDQNFVQMVHEKLTELVTLAKQSKQKCRSQSFDVMNREKRQFVHEYCEHFGCSSVSYDDEPKRNVVATASKDSSWLPSMGLLEVIQRKSGHRKVLAPTFAKSSQAVSQSMPLKPAEAASRPVNGGAVSSYIQAAGKTPSGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -