Salt014750.1
Basic Information
- Insect
- Siphlonurus alternatus
- Gene Symbol
- nfxl1
- Assembly
- GCA_949825025.1
- Location
- OX463782.1:9994285-10002387[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 2.8e+04 -5.1 1.9 15 19 173 177 173 177 0.85 2 18 0.15 2.1e+03 -0.5 0.8 4 10 208 214 207 214 0.95 3 18 3.1e-08 0.00043 20.9 17.0 1 19 222 239 222 239 0.99 4 18 2 2.8e+04 -6.2 4.7 9 13 245 249 243 250 0.73 5 18 1.5e-09 2.2e-05 25.0 13.3 1 19 275 293 275 293 0.99 6 18 1.1e-08 0.00015 22.3 16.5 1 19 328 346 328 346 0.99 7 18 3.2e-05 0.45 11.2 13.9 1 18 382 399 382 400 0.96 8 18 0.76 1.1e+04 -2.8 0.5 1 5 409 413 409 418 0.73 9 18 6.3e-05 0.88 10.3 16.2 3 18 436 451 434 452 0.92 10 18 1.6e-09 2.3e-05 24.9 15.5 1 19 461 479 461 479 0.99 11 18 0.61 8.5e+03 -2.5 1.0 5 10 507 512 507 512 0.94 12 18 4.4e-05 0.61 10.8 7.2 9 19 527 537 525 537 0.90 13 18 0.005 71 4.2 6.1 3 12 548 557 540 557 0.82 14 18 2 2.8e+04 -5.2 3.5 14 18 588 592 588 593 0.85 15 18 0.13 1.8e+03 -0.3 4.9 1 11 629 639 623 641 0.81 16 18 2 2.8e+04 -5.2 2.7 5 10 656 661 654 661 0.82 17 18 0.0032 45 4.8 15.9 4 19 671 686 669 686 0.95 18 18 4.8e-06 0.067 13.8 12.6 1 18 731 750 731 751 0.90
Sequence Information
- Coding Sequence
- ATGGAGGCCCAGCGTGGCAAAAAAGGCCGTGGTCAACCCAAAAATGCGTGGAATATACCAAACCAAAAGCCGAATCCGACTCCTGGAGCCAAGGCGGCGAACCGTGAGCATGATAGGGCTGCCGCCGAGACTCGCTTCCAGGCGGCCAAGGCGAAGCTCGAGCAGTCCGTGAAGAAGCACCTCGAGTACGACGCCTCGTCGTCCGAGGAGGAGGAACTGCAAAGCGACAATATCCTTGGCTCTGTATTGAAATCCTATGCCAACTCTGGAGGAGTCGTTAATAACTTGGGACGCACTCAGAGGTTCTTGGAAGATGCCTTCCAGTCTGGTGCTGCCACCTGCCTTATTTGTATTGCAACTGTAAAGAGAGCAGATCCCATTTGGAGCTGTGAGGAATGCTACTGCTTCTTCCACCTGCCCTGCATCCAGCGCTGGGCTGCTGACTCAATCGCTCAACAGAAGCGCTCGGCCGAGGATCTTGCTCCGTACGAGAGGCCGCCGAAGCTGCTGTGGGGTTGTCCCAAGTGTCGCAGAGACTACGAGCCAGAGGCCACTCCCCAGCGCTACGTCTGCTTCTGTGGCCAGACCGAGGACCCCGCGTTCCAACCGTGGCTCGTGCCTCACTCTTGTGGGGAGACGTGTGGCAAGCCACTGCAGCCGGAATGTGGACATAAGTGCCTGCTTCTTTGCCACCCAGGTCCTTGTCCCCCCTGCCCTCAGGTGGTACAATGTCCGTGCCACTGCGGCCAGAGCCCCGCCCAGCCTCGGCGCTGCTCCGACCAGCGCTGGTCCTGTGGGGCCACCTGTCGTCGCGTCCTGGGCTGTGGCCGGCACAAGTGCAGTGCCGTGTGCCACGAGGGGGTGTGTGAGCCGTGCCCCCGCACCAGCAGGCAGCAGTGCCAGTGTGGGGGGCAGGAGAGGGAGCAGCCCTGCGCGACCCCTGCTTGGCAGTGTGGCAAGGTGTGTGGCCGGCGACTGAGTTGTGGGCATCACTCGTGCCAAGACGTCTGTCACTCCGGCGCTTGTGGCTCGTGCCCTCGTGCAGGCTCACGCACCTGTCCGTGCGGCAAGTCCAGCCACGCCTCCCTGTCGTGCACGGCCGAAATCCCTACTTGTGGAGACACATGCGGCAAACTGCTGGCGTGCGGGGCCCACACCTGCCAGGAGAGATGTCATCGTGAGCAATGTGGAGGGTGCTTGCAGGTCTCGGTCAAATCGTGCCGCTGTGGACTGCACCAGCGTGAGATGCCGTGCCAAAAGGAGCTGCTCTGTGAGGTCAAGTGCAAGCGCAGCAGACACTGCCTGCGACACCCCTGCAACCGCAAGTGCTGTGATGGTCAGTGCCCCCCTTGTGAAAAGCCCTGTGGCAAGACGCTCGGCTGTGGTAACCACAAGTGTTCGGGGGTGTGTCACCGCGGACCCTGCTACCCCTGCCCTCGCACAGAGACCCTGGCTTGCAGCTGCGGCGACACCACCCTGACCGTACCCTGTGGCAGAAGAAGGCAGGCGAGGCCCCCCAAGTGCAACAAACTCTGCAGGGTTCCGGCTGACTGCCACCACCCCTCACGGCTGTCCCACAAGTGCCACGCAGGGGAGTGTCCGCCATGCCGGCAAGTGTGTGGCCAAAAGCGTCCCTCATGTGTGCACCGATGCCCTGCTCCCTGCCACTCGGCAGTGTGGGTCGTGTCCGTGGTGGGGGGAGACAAGCCCCTGGCAGGACCCTGGGAGAAGAGGGAGAGTGTCAGGGAGAAGAAGAGCCTGCCCTGCCCAGACTGTGAGGTTCCAATGCCGGTGACGTGTCTTGGAGGCCACGAGACGAGTGACTGGCCGTGTAGCAGAGCATCGCCTTCTTCGTGTGGGAGGCGCTGTGGCCGCAGACTGGCCTGCGAGAACCACCAGTGTGTTCTGGCCTGCCATCTGGTGACCGGCGCAGCAAGCGAGCTCACGGCTGGCTCCAACTGCTCCCGCTGTGAAGCTGCTTGCTCGCTGCCACGGCCCCCAAACTGCCTGCATCCCTGCCTGGCCCCCTGCCACCCCGCCCCCTGCAAGCCGTGCCCCCAGGGGGTACGTCTAAAGTGCCACTGTGGGGTGAGCCAGCTGCACCGCCCCTGCGCACAGTGGGTCAACGCCAGCCCTGAGCAGCAGCAGAGCCTGCTGAGCTGCGGCAACCAGTGCCCTAAAAACTACCCATGTGGTCACCGGTGCCGTGCCACGTGCCATGAGGGGTTGTGTCCGGACCCCGAGACGTGCCAGCGGAAGGTCAAGGTGCCGTGTGCATGCAAGCGGCTGCGCAAAGAGTTCTCCTGCGAGGCGGTACGGAAAAACACGGCAAAAGTATCATGCGACGCTGTGTGCAAGAAGAAGCAGCAAGAAGAGAAAATGGAGCTAGAGAGGGAGGCGGCCGAGCGGCAGCGAGAGCAAGAGCGACGGGAGCGTGAGGAGCTGGCTCAGTTTGAGAAGCGGCAAGGCAAGCGCAAGGGCCGGGAGCGAAAACGCAGACACAGCGAGGAGGAGCTGCCCCCTGCCTGGCATCGCTATGCCAAAGTGGGCGTGGCAGTGTTGGTGGTGGGCCTGCTGCTGGGCCTGGCAGTGAACCTGACCTCCTAG
- Protein Sequence
- MEAQRGKKGRGQPKNAWNIPNQKPNPTPGAKAANREHDRAAAETRFQAAKAKLEQSVKKHLEYDASSSEEEELQSDNILGSVLKSYANSGGVVNNLGRTQRFLEDAFQSGAATCLICIATVKRADPIWSCEECYCFFHLPCIQRWAADSIAQQKRSAEDLAPYERPPKLLWGCPKCRRDYEPEATPQRYVCFCGQTEDPAFQPWLVPHSCGETCGKPLQPECGHKCLLLCHPGPCPPCPQVVQCPCHCGQSPAQPRRCSDQRWSCGATCRRVLGCGRHKCSAVCHEGVCEPCPRTSRQQCQCGGQEREQPCATPAWQCGKVCGRRLSCGHHSCQDVCHSGACGSCPRAGSRTCPCGKSSHASLSCTAEIPTCGDTCGKLLACGAHTCQERCHREQCGGCLQVSVKSCRCGLHQREMPCQKELLCEVKCKRSRHCLRHPCNRKCCDGQCPPCEKPCGKTLGCGNHKCSGVCHRGPCYPCPRTETLACSCGDTTLTVPCGRRRQARPPKCNKLCRVPADCHHPSRLSHKCHAGECPPCRQVCGQKRPSCVHRCPAPCHSAVWVVSVVGGDKPLAGPWEKRESVREKKSLPCPDCEVPMPVTCLGGHETSDWPCSRASPSSCGRRCGRRLACENHQCVLACHLVTGAASELTAGSNCSRCEAACSLPRPPNCLHPCLAPCHPAPCKPCPQGVRLKCHCGVSQLHRPCAQWVNASPEQQQSLLSCGNQCPKNYPCGHRCRATCHEGLCPDPETCQRKVKVPCACKRLRKEFSCEAVRKNTAKVSCDAVCKKKQQEEKMELEREAAERQREQERREREELAQFEKRQGKRKGRERKRRHSEEELPPAWHRYAKVGVAVLVVGLLLGLAVNLTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -