Salt004229.1
Basic Information
- Insect
- Siphlonurus alternatus
- Gene Symbol
- pnr
- Assembly
- GCA_949825025.1
- Location
- OX463778.1:50957952-50962914[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.4 1.7e+04 -3.9 0.0 10 17 43 50 40 52 0.77 2 3 3.2e-17 1.3e-13 50.9 3.8 1 34 336 368 336 370 0.96 3 3 9.8e-19 3.9e-15 55.8 7.5 1 35 393 426 393 427 0.97
Sequence Information
- Coding Sequence
- ATGGATTGCAGTACAGGAAATAAAACTGAAGAAACATCCGGAGGAGCCGTAACAGAATCTTCTGAGAATGAGACAAAAGTAACTGCACCGTCAGAAAGTCAGGGATCAGATAATGCTGAAACCATTACCTTGTGGAAAGCTGATCCTGAAAGTTCAGAAAAACCTGAAACAGTTTTATCAAATCCTGAGCTTGATAatgaacaacaacaacaacaacaacagcaaatTTCTGATTCTCCTCCTGCAAGCGTCATCACGTCAACTGCATCTCGTCAACATAGAAACGTAATCCGGTCAGGCACTGAGAAGGAACATGGTCATGAATCACCGAGGCAACAATACCAGAATAACAACAATTACACACCACCATTACAACAACAGAACAACAATGAACTTGATGATCATCCTCAACAACCCCCACCCCCACCATATCAACCCCCTCAAGTTTATAACACCCCAAATCCTTCTCCTTCACAAAATTATCATTTGGAGCAACAAAATCAACATTATGTTCATAATTCTGATCAACAACAATCCCCTCCACCTCACTCTCAAGGTGTAGTGGTACAAAACATGCACCACGTTCCACCATTATTAACGTACGAGGCTCTTAAATACGAAGAAGAAATGCAGATCAATGGAGCCAGTCCTCCTCCACCCCAAAACACATTGTTGACCAACTCAACGTATGCCACACTCGAGCCTGTTCATTTACAACCTCAACCTTCGTACTCGCCCCCTAATTCAAGAGCTGGAAGTTATCCTGGAGCTTCTTCGCACCATCACCACCATCACTTGGCGCTGGCGTCACAACCACTGACCCTTCCTGGCGAGGCCACCCTGGAACTGCGGCCCTCGAGTGTGGCTGGTTCTGGGGGTGGTTTTGGGGGTCAGATGTCTAGCCAGGGTCACACCCACCACTGGATCAACACTGGAGGGCTGTCAGATGACCTTTATGATCCAGCTCGCGCAGCGGCGGAGGCGGCAGCCGTGGAAGGCAAGGAGTGCGTCAACTGCGGGGCCAGCAACACGCCGCTGTGGCGCCGGGACGACACCGGACACTACCTGTGCAACGCGTGCGGCCTGTACACCAAGATCAACGGCATGAACCGACCCCCAGCCAGGCAGCAGCAGAAGAAAACCTCAGGGACTGGCAGTCGGCGCACGGGCGTGACTTGCGCCAACTGCAACACCACCACGACCACGCTGTGGCGGCGTAACAACAATGGGGAGCCCGTGTGCAACGCGTGCGGCCTCTACTTCAAGCTGCACAACGTGAACCGACCCCTGAGCATGAAGAAGGAGGGCATCCAGACCCGCAAGCGCAAGCCCAAGAGCGGGGGTGGAGGGGGCGGAGGTAGTGGAGGCAAGGGGGACGCGCGACACAGCCAGCACCACACTGGATACTTCTCGGCGGTGTACCAGGACATCCACACTCCTGCCGCTGGTGTAGGGGGCGGGACCGGGGGCGTGGGTCGAGTGCTCATTGAGATGCCTGCTGGCTCCGAGCACGATGAGCTTCACGGACTGTACGGTGGCGGCGCCAGCTCCGCGGTGGGTGCCGGGGTGCACCAACCCTTGTCCTCACCCCCCAGTGGCGGTCCCTCCTCCTCACCCCTCCTCCCCTCCAGCTCCATCCTCAACCGACACATCGCAAACGTTCCTCCACTGGAGCCGCTGCAGGGCAGTGGTGGCGGGGACTCCCCTCGCCAGGACGAGGTGGACCCTCCCCCCTCGGCCATGTCCCTCATCCTTTCCGTGATGAACCAGCAGGCGCCCCAGCTGCACCAACAGCACCAGCAGCAGCACCAACAGGGCGCCAGGAACTGA
- Protein Sequence
- MDCSTGNKTEETSGGAVTESSENETKVTAPSESQGSDNAETITLWKADPESSEKPETVLSNPELDNEQQQQQQQQISDSPPASVITSTASRQHRNVIRSGTEKEHGHESPRQQYQNNNNYTPPLQQQNNNELDDHPQQPPPPPYQPPQVYNTPNPSPSQNYHLEQQNQHYVHNSDQQQSPPPHSQGVVVQNMHHVPPLLTYEALKYEEEMQINGASPPPPQNTLLTNSTYATLEPVHLQPQPSYSPPNSRAGSYPGASSHHHHHHLALASQPLTLPGEATLELRPSSVAGSGGGFGGQMSSQGHTHHWINTGGLSDDLYDPARAAAEAAAVEGKECVNCGASNTPLWRRDDTGHYLCNACGLYTKINGMNRPPARQQQKKTSGTGSRRTGVTCANCNTTTTTLWRRNNNGEPVCNACGLYFKLHNVNRPLSMKKEGIQTRKRKPKSGGGGGGGSGGKGDARHSQHHTGYFSAVYQDIHTPAAGVGGGTGGVGRVLIEMPAGSEHDELHGLYGGGASSAVGAGVHQPLSSPPSGGPSSSPLLPSSSILNRHIANVPPLEPLQGSGGGDSPRQDEVDPPPSAMSLILSVMNQQAPQLHQQHQQQHQQGARN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -