Salt000844.1
Basic Information
- Insect
- Siphlonurus alternatus
- Gene Symbol
- SNAPC4
- Assembly
- GCA_949825025.1
- Location
- OX463778.1:3380649-3392004[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.4 3.3e+03 -1.1 0.2 3 18 209 224 208 225 0.88 2 5 0.083 81 4.1 0.1 23 43 290 312 285 315 0.78 3 5 1.4e-10 1.3e-07 32.2 0.5 1 43 321 365 321 368 0.95 4 5 9.8e-11 9.5e-08 32.7 0.0 2 44 373 419 372 421 0.94 5 5 1.3e-08 1.3e-05 25.9 0.0 2 44 428 470 427 472 0.96
Sequence Information
- Coding Sequence
- ATGGAAGAAAGAAGTATTCACTCTCTACAGTCTctacctaaaaaaaatcattatgctTCTGATTGTGATGAAATAAACTCAGAAGATGAATGTGAATATGACACCGCCACAGACTGTGACACCGCAGATGGTGAGGACGATGAAGTCATCGCTAACTTCGTTAGAGCCATAGAAGAAGACTTCGATGAGATTGGAAGCAGAGAAGTCGAAGCACTCGTCACTTCTGGAAGTAGTGATAAAGATGATACCGCGCCTGATTCGACGATTCCAATACATTTAGTTCAGTCTGCTGAAGATGTTCTGGGCGTGGATCTTAATGTGCAGGATACAAGtgaaaattgcattgaaatttgtttaaaactgAACCAAGCAAAAGCAGCATTCCTGCGAGAAAAACTAGAAACAATCAATAAGCTGCTGGAAAATAATTTGGAAGAAACTATGGAACAGTTTAAAACTAATTCTTCAGAACTCCAAAATGCAATCTTAAATCTGGATAGCACCAGAAAGTTTGGCATGCCGTACTTCAAAGACTCGGCCCTGTTTCCTTGTCCGAAGAACGCAGACACCATCACCAAGGCTCGGAGGAAAGAGGTGGACTTTGCCAACATGGGGCCTCAACTCAAGTGGCAACGTTGGGAGATGAAGCTTCTTGATGATGCAGTCCGCAAGGCTGCCGTAGAGAAACTGTTGAACCCTCTGAAAGCTCGCCGAGCGCGGCTGCAGGAGCAGCTGAACAACGACGAGTTCCGAGGCTTGCCCACCAAGAAGACTCGTCAGCTGCTGGAGCAGCTGGAGGAAGAGATCTCGGAGCAGACGGGAGAGCCCCTCTTTGAGCTGCTCCATGACGCAGAGGCAGAGCTTGACTGGATGAAAGTGTCCGCCTCCGATTTTCTGGGAAGACGCTCCGCCAATGAGTGCCAAGCCATGTGGCGGTGCTGCCTCATGCCGGGCATCAAGCGGGAGAACTGGAAGATCAAGGAGACCACCATCCTCAAAGAGCTTGCCCATAAGCACAAATTCCAGGATTGGGAGAAGATTGCTGAAGAGTTGGGCACCGGCCGCTCAGCTTACCAGTGCTACATCCACCTTCAAGTAACATTCAACCGGAAGCGAACACTGTGGACCAAGGCTGAGGATAGGAAACTGATGGCCAGAGTTGCAACCTACAGACAGGGATCGTATATTCCCTTCGCCAAGgTGGCTGCCACGTTTCCTGGTCGCACGAGCCAACAATGCCGTCAACGGTGGATAAACTCGTTGAACCCCAACATTTGCAGTGGCAATTTTACTGCTCGTGACGACCTGATCCTGGCCACTGCACGCCACACCCATGGGCTCACTTTCAGCCAGATCTCGAGCGTGCTGCCACAGCGCACACCTGGCCAGCTGCGCAATAGATACTTGCGCCTGCAGAATCTCGAACCCTCTCTGCCTTGGACACCGTGA
- Protein Sequence
- MEERSIHSLQSLPKKNHYASDCDEINSEDECEYDTATDCDTADGEDDEVIANFVRAIEEDFDEIGSREVEALVTSGSSDKDDTAPDSTIPIHLVQSAEDVLGVDLNVQDTSENCIEICLKLNQAKAAFLREKLETINKLLENNLEETMEQFKTNSSELQNAILNLDSTRKFGMPYFKDSALFPCPKNADTITKARRKEVDFANMGPQLKWQRWEMKLLDDAVRKAAVEKLLNPLKARRARLQEQLNNDEFRGLPTKKTRQLLEQLEEEISEQTGEPLFELLHDAEAELDWMKVSASDFLGRRSANECQAMWRCCLMPGIKRENWKIKETTILKELAHKHKFQDWEKIAEELGTGRSAYQCYIHLQVTFNRKRTLWTKAEDRKLMARVATYRQGSYIPFAKVAATFPGRTSQQCRQRWINSLNPNICSGNFTARDDLILATARHTHGLTFSQISSVLPQRTPGQLRNRYLRLQNLEPSLPWTP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -