Smay010700.1
Basic Information
- Insect
- Sipha maydis
- Gene Symbol
- pnr
- Assembly
- GCA_034509805.1
- Location
- JASXSY010000630.1:476826-480813[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-18 1.2e-14 54.8 3.2 1 34 42 74 42 76 0.97 2 2 8.1e-19 4.3e-15 56.2 5.7 1 35 101 134 101 135 0.98
Sequence Information
- Coding Sequence
- ATGACCGGTTTCTTCTTCTTTCTTGTCGTCGTCTTCGTGTGTTGGCGCGTCTTAGACGACGACGGCgtcgttgttattattgtagACACGGGAATGGATTTGCAGTTCGGAGACGGCCGGGAATGTGTTAACTGTGGTGCCATCTCCACTCCGCTGTGGCGCCGTGATGGTACTGGACACTATCTGTGCAATGCCTGCGGGCTGTACCACAAAATGAACGGCATGAACCGGCCACTGGTCAAGCCTGCCAAAAGATTGGTCGCATTCGAGACTGCATCAAACAGACGCCTAGGTCTGTCGTGCACAAACTGTGGCACTCGTATGACCACACTGTGGAGGAGGAACAACGACGGCGAACCCGTATGCAACGCCTGTGGACTGTACTATAAACTTCACGGCGTCAACAGGCCGCTGACGATGAGAAAAGACGGCATTCAGACAAGGAAGAGAAAACCGAAAAAGCAACCTTCATCGTCGTCCTCTTCTTCCACTGGCTCGTCCAACGTGGAGAACAACAGGCAGTCCTCGTCAACGGCAATAGATCTATTAgTGAATAAACATCAGGCGGTCGAAATCAAACACGAGCACTATGACGCTGCGGCTGCGGCTGCTGCGGCCGCGGAACATTTCCTCTTCCCCGGATCGACTGGACCAggccatcatcatcatcatcatcatcatcatcctCAACTCGGCAGTTTCAGTTTCCCGCTTCCCCAGGCTCCAGTGACCGCCCATAGCTACCAACACTTGTTAAACGGTCACGTCAACAACAAACTGATGGCGTCCTAG
- Protein Sequence
- MTGFFFFLVVVFVCWRVLDDDGVVVIIVDTGMDLQFGDGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPAKRLVAFETASNRRLGLSCTNCGTRMTTLWRRNNDGEPVCNACGLYYKLHGVNRPLTMRKDGIQTRKRKPKKQPSSSSSSSTGSSNVENNRQSSSTAIDLLVNKHQAVEIKHEHYDAAAAAAAAAEHFLFPGSTGPGHHHHHHHHHPQLGSFSFPLPQAPVTAHSYQHLLNGHVNNKLMAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00019853;
- 90% Identity
- -
- 80% Identity
- -