Basic Information

Insect: Sipha maydis
Gene Symbol: Hivep2
Assembly: GCA_034509805.1
Location: JASXSY010002264.1:286966-291165[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00029 0.053 15.2 0.3 2 23 28 50 27 50 0.97

2 11 0.066 12 7.7 0.5 1 23 180 203 180 203 0.92

3 11 0.00057 0.11 14.2 1.0 1 23 211 233 211 233 0.97

4 11 0.00011 0.02 16.5 3.3 1 23 239 262 239 262 0.98

5 11 0.012 2.3 10.0 2.9 1 23 513 536 513 536 0.95

6 11 0.0019 0.35 12.6 0.5 3 23 716 736 715 736 0.98

7 11 1.8e-05 0.0034 18.9 3.1 1 23 742 765 742 765 0.97

8 11 0.00096 0.18 13.5 0.9 1 23 808 832 808 832 0.95

9 11 0.19 34 6.3 1.1 1 23 897 920 897 920 0.97

10 11 0.00068 0.13 14.0 2.2 3 23 954 974 953 974 0.97

11 11 0.022 4.1 9.2 3.6 1 23 980 1003 980 1003 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00029	0.053	15.2	0.3	2	23	28	50	27	50	0.97
2	11	0.066	12	7.7	0.5	1	23	180	203	180	203	0.92
3	11	0.00057	0.11	14.2	1.0	1	23	211	233	211	233	0.97
4	11	0.00011	0.02	16.5	3.3	1	23	239	262	239	262	0.98
5	11	0.012	2.3	10.0	2.9	1	23	513	536	513	536	0.95
6	11	0.0019	0.35	12.6	0.5	3	23	716	736	715	736	0.98
7	11	1.8e-05	0.0034	18.9	3.1	1	23	742	765	742	765	0.97
8	11	0.00096	0.18	13.5	0.9	1	23	808	832	808	832	0.95
9	11	0.19	34	6.3	1.1	1	23	897	920	897	920	0.97
10	11	0.00068	0.13	14.0	2.2	3	23	954	974	953	974	0.97
11	11	0.022	4.1	9.2	3.6	1	23	980	1003	980	1003	0.95

Sequence Information

Coding Sequence: ATGTCATCGGAAATGTTACGTGTTGACAATCTACGCCAAAGGCTATTTTGCAACTCCGTATTGGACACAAAACGGGAGAGTCGGTGTCCCGTGTGCAACGCAATGTTTTCCACCACGTACAGTATGCGATTACACTTACAAACCGCTCACATGAATTTGGAACCACAAAATCTTTCGGCCAAAACGTTTTACCGTGAGTTCAACAACAACAATAgcatcaacaacaacaacaacaataacaacaacaataacaacaataacaacaacaccGTCGCCGTGAAGTCATTCAACAGTCCCGAACGCGTGATGCACATCACGCCAGTCAAATCGATGTATAACGGCGATTCGACATGCAGCACAGATTTCAGCGATGGGTACCCATCAGATAAAGATTCGTACTTTGGGAACTCACCAAAAGACGAAATACCCCTATCCGTCACTGTTAGCGGTGGTGGCAGCGGtagcggtggtggtggtggttacATATCGCACTTGCCAGCTAAGCGCAGCAACCATCACTTGAAAACCAAACGTACATACACGTGTCGGCTATGCTCGACCGTGTTCGGAAACTTGCGCGCGTTAAAGGGCCACAACTCATCCAGTCACAACAAGTCCACCAACGGACTCTACGCGTGCAACATATGCGAATTCTCGAGCACCGAGAAAGCGTCACTGAACCATCACATGAAGGGCCACACGGGTGAAACGCCGTATGTGTGCAAAAAGTGTTCGTACGCGTTTACCACCAAGGCAAACTGCGAGCGACATCTAAGGACCATACACAAAGCGTCCAATTCCGAAGTGAAGACGTCAATATTGTTCAAGAACGAGGAGAAACCGGTGCAATCGACCAATGGTGAAGAGTCGGTCGTCGTTGACTGTAAAAGAGGAGGGGTGGACGACGAATACAAGACGATGATGGAATATTCGTATTACGAATCGTCGGCAGGCCAGAAGAGTTCAGAAGACGATGAGGACGATTTCGACGAGCCATTGGACCTGAGTATGAAACGTTTTAAACAGGATTTCGACTGCGAACCGCAGGATTTGTCCATGAATAGCGTTAAAAGGGAGTCGTTCATGACCACGGACCATTCGGACGAAGAAGACGCCGCGGTGATGCCGACGACAGCCTCGTTCAGGGAGCAACTTGTGCCGCAAGCCCCGCCCGGCTACATGGACTTGACAATACCTACGCCTTTACACGCGTATTTTCTCAATGAGCATAGGATGTTCTTCAACGGCATGTACCCGAACGCAGAACGCATGCTGCCCATCCCGCTCACCGTTGATATGATCCGAGCCATGCGGCAGATGAACGAACCACCGCCAGCTCCGGTCCAAGAGCCACCCGAGGTGCTGCCACCCAAGCCCAAGACGCCCGAACCCGTGGCCGTACCGTCGTCTGCAGCACCAGTGGCGGCGGCGACGGACGTCGCCCTACAAAAACCCAAGGACGTGAATGGACTGAGATTGGTGATGAAGAATGGAATTTTGGTGCCTAAACAGAGACGGTTCAGGACGGACCGACCTCACGTTTGCGAGACGTGCAAGCGAGCCTTTACATTAAAGTCAAACCGTGATCGGCACGTCAAGAACCAACATCCCACCGATTGGCATAAGAAACCCAGATCGCTGTCCAAATCCGAGCCGCAGTTCTTGGCCGCCAAACAGGAACAAGACTTGGCGCCGATATCAGATCAGGTAAAAATGGCATTGTCGTTAAAATGCCGACAACAGGATCAACAGCAGCAACGGACGACCGAAGACGAAGTGGACGACAGGGATGAGGAAGAAGATGACGTTGTGGAGGAGGACAAATTGGTTATAGTGGAAGACGTTGTTGAGAATTTGAAGCTCGAAGTCAAAGAAGAGTCGGCCGATTTGGCCAGCGTTTCCAGATTGCTGGACAATGCTTCGCACCAGATGTTTCCCCAGTTCAATAGATCCGATGAGGATCACAATGAAGCGACCAGCAGTGAGGAAGAACACTGTGAGGCGGTGATTTATTCCGAAAACGACGGATCTggTACCAACGCGGGCAACAACAACAATGACATAAACTTCAACAACGACAAGGACGAGAGCCGAGAGAAACGGAAGAAGGTGAGCGCATACGCGGCCGCACCCAACCGCGTGCTGTGTCCCTTCTGTTACCTATCGTTCCCGTGGACATCCTCGTTAAAACGTCACATCCGCACGCATACTGGAGAGAAACCGTACCAATGCAAGCACTGTCCGCTATCGTTTTCAACGAAGTCAAACCGCGACCGGCACATACTGCGCCTGCACTGCACGCCGCCCAGTAAGTCAGCCACGTCGTCCGACAACGAGGCGGTCATCTCCGCTGCGGTAGCAGCCTTCACCGCGACCACAAACGACGCATCTGCCACGTCCTCGGCTGATTCGAAAAACTTGTACAAGTGTACGCTATGCCCGAAGACGGCATTTTCCAAGCGCAAAAACCTCATAAGCCACATCAATCGGGTGCATTTTGATAAGAATGGAGGCGGCGGCGGTGAAGGCGGCGGTAGTGCTGGAGTGGACGATGACGATCGAGGTGGTGACGGTTCTGACGACGCGCCAGAATCGGAACGCGACTACGCGAACAACTTGATCGCGATACCGGGGAACAACGGCACTGGAGTCCCTTCAACCGCTACGACTACCGGGTCCGAACCGTGTTTTAAGTGTCACTTGTGTGACAGCAGTTACCTGGATAGGCAGAACGCCCTGGACCACATCCGGATCAACCACGCCGAGTGTTATGAAATATTGGTATCGCAGGGGGCCATGGACAACGATCACGAGGCGTCGGCCATCAAACAGGACGATGTGGAAAACAGAAAGGTCCTGTGCGCGTTCTGCCTGCACCGTTTCTACTCGGCCGAAGACCTACGCCGGCACATGCGCACGCACACCAAGGAACAGCCGTTCGCGTGCCAGTCGTGCAAGCGTCGATTTACACTCAAGCACAGCATGGTCCGACACATAGCGAAAAAACACGGCGGCGCGGGCGTGGGCGACACCGAGCAGCAGCACCACCACCAGTACCAGTACCAGTACCAGCGATCACGGAGTTCGAGTCCGCGACGGCCGTCGGCGGGCGCCGCGAACGACGACTGCGCGTCCAGAGACGAGAACCGCGCGGCCGACACCGGGCTCATCGGCACGCTGCTTGGGATACGCGACAACACGGTCATCGATCAGATGCTGCAGACCAAGTCTCCCGAGGATGCGGCCAAAATGTTGGGCATCGAAAACAACGAATGA
Protein Sequence: MSSEMLRVDNLRQRLFCNSVLDTKRESRCPVCNAMFSTTYSMRLHLQTAHMNLEPQNLSAKTFYREFNNNNSINNNNNNNNNNNNNNNNTVAVKSFNSPERVMHITPVKSMYNGDSTCSTDFSDGYPSDKDSYFGNSPKDEIPLSVTVSGGGSGSGGGGGYISHLPAKRSNHHLKTKRTYTCRLCSTVFGNLRALKGHNSSSHNKSTNGLYACNICEFSSTEKASLNHHMKGHTGETPYVCKKCSYAFTTKANCERHLRTIHKASNSEVKTSILFKNEEKPVQSTNGEESVVVDCKRGGVDDEYKTMMEYSYYESSAGQKSSEDDEDDFDEPLDLSMKRFKQDFDCEPQDLSMNSVKRESFMTTDHSDEEDAAVMPTTASFREQLVPQAPPGYMDLTIPTPLHAYFLNEHRMFFNGMYPNAERMLPIPLTVDMIRAMRQMNEPPPAPVQEPPEVLPPKPKTPEPVAVPSSAAPVAAATDVALQKPKDVNGLRLVMKNGILVPKQRRFRTDRPHVCETCKRAFTLKSNRDRHVKNQHPTDWHKKPRSLSKSEPQFLAAKQEQDLAPISDQVKMALSLKCRQQDQQQQRTTEDEVDDRDEEEDDVVEEDKLVIVEDVVENLKLEVKEESADLASVSRLLDNASHQMFPQFNRSDEDHNEATSSEEEHCEAVIYSENDGSGTNAGNNNNDINFNNDKDESREKRKKVSAYAAAPNRVLCPFCYLSFPWTSSLKRHIRTHTGEKPYQCKHCPLSFSTKSNRDRHILRLHCTPPSKSATSSDNEAVISAAVAAFTATTNDASATSSADSKNLYKCTLCPKTAFSKRKNLISHINRVHFDKNGGGGGEGGGSAGVDDDDRGGDGSDDAPESERDYANNLIAIPGNNGTGVPSTATTTGSEPCFKCHLCDSSYLDRQNALDHIRINHAECYEILVSQGAMDNDHEASAIKQDDVENRKVLCAFCLHRFYSAEDLRRHMRTHTKEQPFACQSCKRRFTLKHSMVRHIAKKHGGAGVGDTEQQHHHQYQYQYQRSRSSSPRRPSAGAANDDCASRDENRAADTGLIGTLLGIRDNTVIDQMLQTKSPEDAAKMLGIENNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01346657; iTF_01170152;
90% Identity: iTF_01346657;
80% Identity: -