Smay009321.1
Basic Information
- Insect
- Sipha maydis
- Gene Symbol
- -
- Assembly
- GCA_034509805.1
- Location
- JASXSY010000554.1:22232-26353[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0021 2.9 9.3 0.2 26 45 100 120 58 121 0.65 2 2 0.00041 0.57 11.5 0.1 26 44 221 240 179 242 0.69
Sequence Information
- Coding Sequence
- AtggatacatattatgtttgtaatgGAAATCTTGTGAAAAATGATACTCAAATTGACccaaaagatatatttattattgaagaaCCTTTCGACACATACGACACTAACAGTAATCCAGATGAGTCATTACATCTTGAAAATGATATTCTTCTAGAGtctcgTAAAAGAAATTGCCGAGAATGGAGTCAATATGAAACAAAGATTCTTATGGATATGTATAGACGTAATGTCACTCAAGTGGGGCcaatgaaaaagtttaaaagcaAAAGAGAAATGTTCAAATATATTGCACAAATAATatctactaaattaaatataatgagaaGTGCTCATCAATGTGAAAAccgATATAAAACTGTAGTAAACCAACTTAAAGTTGGGcctacaatattacaaaaaactaaATCCAATGTAGAAAATAATGAAGAAGAAAGTCaggaaaaatctcaaaatgatGTAACAGCTTCAGTATCGGCAGACCATGACTATAATGGACAGAACTCTAGAATTAATGgaCAATGCCCAATAAAATCAATGAGTGAATGGGGAGTTGATGATACAAAGCTACTTATGGAACTTTACCGAAAGAACATTTCTAAAGTTGGTTTAGAAAGAACTTTtagaactaaattaaaaatgtttgaacacATAGCAACTGTAATTAgtgatattcttaatattacaaGGACGGCTGAACAATgtttaaataggtataaaacaatattcagaagaaaaagttttaagcaaaataagataaacaataataatttatcaatgaataacacaattatagaaaataatttaaacagcaATGATAGTCCAGATTGTGATACACATCTAGTTAATAATTTCTGTGAAACTGAATTCAAGACTCACATTTATGatggaaaaacattaaaaaagatTGTTAGACAGCCTAAAATAGTACCTAAAATAATACCTACGGAACTGAATATGAATCCGGAAACTTTGTTGGTGAAAACTTTAAAAGATATTGCTGCCCAAAAAGAAAAGACTCTATTAAAAATTGCAGCAAGTCAAGAGTGTGCTCATGAACGTAGGCATCAAGAACAATTAGCTCTTATCCGATATTATGgaGACAATTTTGCTCGAAGTTTtggaattcaaataaataatacaactgaACATcaatattga
- Protein Sequence
- MDTYYVCNGNLVKNDTQIDPKDIFIIEEPFDTYDTNSNPDESLHLENDILLESRKRNCREWSQYETKILMDMYRRNVTQVGPMKKFKSKREMFKYIAQIISTKLNIMRSAHQCENRYKTVVNQLKVGPTILQKTKSNVENNEEESQEKSQNDVTASVSADHDYNGQNSRINGQCPIKSMSEWGVDDTKLLMELYRKNISKVGLERTFRTKLKMFEHIATVISDILNITRTAEQCLNRYKTIFRRKSFKQNKINNNNLSMNNTIIENNLNSNDSPDCDTHLVNNFCETEFKTHIYDGKTLKKIVRQPKIVPKIIPTELNMNPETLLVKTLKDIAAQKEKTLLKIAASQECAHERRHQEQLALIRYYGDNFARSFGIQINNTTEHQY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01169789;
- 90% Identity
- iTF_01346402;
- 80% Identity
- -