Smay028060.1
Basic Information
- Insect
- Sipha maydis
- Gene Symbol
- -
- Assembly
- GCA_034509805.1
- Location
- JASXSY010001983.1:21190-31149[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0005 0.7 11.2 0.0 10 31 22 44 20 57 0.93 2 4 0.032 46 5.4 1.2 3 36 240 290 238 291 0.65 3 4 2.1e-05 0.03 15.6 0.1 4 40 348 400 345 405 0.80 4 4 1.1 1.6e+03 0.5 0.0 1 17 502 518 502 531 0.88
Sequence Information
- Coding Sequence
- ATGTGCCATTTCAAAGACTTGgatgTACAATTCTATGAAGAAATGCTTGATAGTTATCAActtcaattattaatacaatgcaCAAGCGAGTTCGGTTACGGTAACTGGAATGCCATTTCTAAACTGTATAACTCTATCATACATGAGGAATACCCCAAAGAAAAATGGAATTATCTCTCAGAACAAAATGTCAAAGAAGAATATACACTACGTTTTATTCAAACCCCATTATTGTGTGGCACTTGGGTACCATTGGAGCATACAAGACCTTTGATACCTGATCGAACAAACCGTATACAAGGCCCTAAAAATGGATttgaagattatttaaaaaaacaacTTCCCATTGATaatttggatatatttttttatccacctcaattaaataacaatggagcagataaagataaatttcattcttctaatgaacattcaaacaaaaaacCAGAGAAATCTGAATCAAATCCTTCAGAATGTGTCTACTGTCAAGAAGAGTTTGAGGTTATTGGATTTCGGACAGATAATCATAAGTTTTCAAACTATAAGACCATTACAAAGTATTCTTGTTGCACAAATAAACAAACGTGTGAAAACATGTATCTATGTCTTTCGTGTTTAGGAAGTGGAGCAGAAATTGGAAAACATAAGAGATatcataattacaaattaataactgaAGTTAAGctttattctagtcaaaattattttcatgaaacAGATTGGACGGCCATGGAAGAATTGGCATTTCTTTATGCATTAGAAGAATGGACATGTAaagaaacagaaaaatatatagatcCTATGAAttctgaaaatttaattaacgaTTGGAATACTGTTTCCCAGCATGTTAGATCAAGAAATGCGAACGaaGCAGAAAttgaatttgaacattttatttcaaatcaaaGAATTTGGAGATTGGTAGAATTATACACGGGTACTGAACCTTTAATTACATATGAAGAAGCAGTTGAAATGGGGTGttttgaaaatcatataaattgttttagtgctttaaatcaaacacaaaaaaaaatttggacaaaatctgatttagaattattatttgattgcaTGACTATTTATGGTTATggtaattggaaaaaaattacaatagaattcaacaaaattataactgataaatattttggaaaaataaatcaatgtataaAAAGAACACCTGAAGaaataaaaaacgaatGTTTACTTCGATTCTATGATAGACCTATTAGACAAAGAAAATGGAAGCCACCTTCTAATTCTAGACCAATCATACTTGATCGTACACGttattttaaagaacctgttaaTTTGAAATATCCTGTTGtgaattctaatttatttgctCAAATTGGTTATGATCATGTTAATGATGAATTTGAATATCCTTATATGGATCATGCTGAATCTCTTTTGGACCTTATAgaagattttgaaattaaaccAAAACTTCCTACTGAAGACTCATGTAAAGTGAAATCGAAGGATCAGTATGATATAAAACCACGCTTCAATGTTGAAGAAGaaaaagcCATAATATCTTGCATACAGTATAATGAAGTTATAAATCAGCGAAGAATAGCTAAAAAATGTGTTCACAATTATAGACTAATTGAACAATTTGCAATTTATAAGGATAAAAAATTgccaaaaataaaaccattctctGAACAATCCTTTGGAGAGCGACTAGTTAAATTGTCGAGATTCATGACACTCGACATTCATAGGTCTTTGATTGAAGgtgcaaaaaatgaaaaacttttgGCTCATCGATtaaatgaattacaattttacaaaattataggtttgaaaaaattgtatgaaattgatgtatttaataaattacatcaaAAGaatttatcaaAAGTACTTGATAGTGATTTAGAACATCAATCGTCAAATGAACTAATTCCTTCTAGATCTGATggaaaaaggtaa
- Protein Sequence
- MCHFKDLDVQFYEEMLDSYQLQLLIQCTSEFGYGNWNAISKLYNSIIHEEYPKEKWNYLSEQNVKEEYTLRFIQTPLLCGTWVPLEHTRPLIPDRTNRIQGPKNGFEDYLKKQLPIDNLDIFFYPPQLNNNGADKDKFHSSNEHSNKKPEKSESNPSECVYCQEEFEVIGFRTDNHKFSNYKTITKYSCCTNKQTCENMYLCLSCLGSGAEIGKHKRYHNYKLITEVKLYSSQNYFHETDWTAMEELAFLYALEEWTCKETEKYIDPMNSENLINDWNTVSQHVRSRNANEAEIEFEHFISNQRIWRLVELYTGTEPLITYEEAVEMGCFENHINCFSALNQTQKKIWTKSDLELLFDCMTIYGYGNWKKITIEFNKIITDKYFGKINQCIKRTPEEIKNECLLRFYDRPIRQRKWKPPSNSRPIILDRTRYFKEPVNLKYPVVNSNLFAQIGYDHVNDEFEYPYMDHAESLLDLIEDFEIKPKLPTEDSCKVKSKDQYDIKPRFNVEEEKAIISCIQYNEVINQRRIAKKCVHNYRLIEQFAIYKDKKLPKIKPFSEQSFGERLVKLSRFMTLDIHRSLIEGAKNEKLLAHRLNELQFYKIIGLKKLYEIDVFNKLHQKNLSKVLDSDLEHQSSNELIPSRSDGKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -