Smay034974.1
Basic Information
- Insect
- Sipha maydis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_034509805.1
- Location
- JASXSY010002782.1:163935-173081[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-16 1.5e-13 51.4 0.0 1 38 336 374 336 379 0.96 2 2 5.1e-18 4.7e-15 56.2 0.0 1 43 866 909 866 911 0.95
Sequence Information
- Coding Sequence
- ATGGGAAGAAGAAAATGGCACCAGTATCAAGATATTTTGACCAAAAACTATTTACTGGAAGAAGAATTGATGGACCGGAGAGAATGGGTTCCCGTAAAATCGTTTAATTCGTGTGATGTGAACACAGACCTAAGCGTAGCGGATCAGTCACCTGCAGAGCtgGAGCCATCGTCTGAAACGGGAAGCTTGAGCGGCGGCAGTCGCAGCGCAGAAAGTCCGGAACCGGAGCCGGGCAGACGGCCGTCGTCCACTCCGCCGCCGGCGGCTTCAGAGCCGTATCGCGTCGATGACCGGTCGCCACCGCCACTGCTGCTGCTTTCCAACGCCTCGTCCGCGGCCGCAGCCGCAATGGCAGCAGTCGCGTCGCTGAACAACTCGTCGCCCTCGTCGGCGACCGCAGCACCGGCGGCCGGACCGCCGTCGCCCGGCGCGTTGGACGCTGCGGCCGCGGCCGCAGGGCTGCCCAGATGGCTGCTGGCCGCCGCCACGCTGAGGCTGCAAGAGACCACGGCAGCCGCCGCAGCCGCCGCatcggcggccgcggccgcaGCTGCTGCGTCCGCGGGCGGCAGGTTGCCGGCCGACCCGCAGCACCACCGCCACGGCCAGCAACAGCACCACCACCAACAGCCGCTCGACCAGCCGCTCGATCTCAGCGCCAAgggcaacagcaacagcaacagcaataACATCAACAACGGCACGACGACGGGCAACGCGTCGTCATCGTCCGCGACGTCCACGCCGACGTGCCCGAGCGCGTCGTCCACGCCGTCGTCCGAGCTGAAAAACGTGGCCAACGCGGCCGCCGTCAACCCGTTCACGCCAGATCTCATAGCCACGGACATGATGAACAAACTTCACAACCTGATCCCGGGCCCGTCCACGTTCCTACCGCACCAATCGCTCAATGCACCTGCGTCGCTCAACACCGGCGGCAACCGGAACGCGTTAAAGTTGAAGACGACAAAACAAACCAGCCACATGGCCGGTAGGAAGACGTACACGGAGGACGAGTTGCAAGCTGCGCTCCGGGACATCCAGAGCGGTAAGCTAGGCACGAGGAGAGCGGCCGTCATATACGGTATACCACGGTCGACGCTTAGAAACAAGGTGTACAAACAGTTGGCGCTGGAACGGGACAGCGGTGGAGGGATCAGAGACGCGTCGGCTAGTGTGGACGACCCTGGCACGGTGGTCAGCGCCGAGTTGCTGGAAGAGGACGACGAGGACGACCGGGACACGGCGTCTGCGGGCGAAGACGATTTCAGCAAATCAACGCCGGACAACAGAGAACACCACCAACACCACGTGCATCAACCACCACAACGCCAGCAGTCGCACCAGCTGCCGAACCGCGTCCCACAACCCGCCTGCAGGACGTCCGCGTCACCGTACATGACGATCGAAGAACTGATCCGGTTGTCGACggaacagcagcagcagcaacagcagcagcagcagcaggcCGTGCCCACCGCGGAGACGCTCCGATTGTTCCTGCAGCACTACACCAACAACAAACTGAGGACTGATTATCGTCACGGCGGCGTGGACGGCACGGCGGACAGTCGAAGGTCACCGTCACCGTCGACTGTGGCGGCCACCAGGTTGCCGCCGCCGCCCATGACCGCCGACCTGTGGCCCGCAGCGGCCGCAGCTGCAGCGGCCGCCGTGGCGCTGGACCCGCAGCACATGGGTACGTATCTGGCGCAGCTGCTGTCCTCGTCGGTAACGACCGCACCGCCGTCGGCTGGGCTCGGCTCTCCGCACTTACCCGCGCACGGCAGCCCACCaccgcagcagcagcagcagccacCCCAGCACCAACAAGACTTCCTAAAAGAGTTCACCGTCAAAGAGATGATGCGCAAGATGCTGGACGACGAGCAGCAACGGTACGTCGGCAAGTCGTTGGACCCGAGACGGTGGTCGTCGAACGGATGTGGCTCGTCCGAACCGATGGACACGGGCCGCAGCAACGACGACGACTCGAACCAATCCGTCATACTGAAGGTGCCGCAGTACAAGCCCGCGCCCGGAGCCAAAGGGCCCGAGTGCGAAGCGGCCGGAGGTCGGGAACTGCGGTCCCCGGGACGCGCAAACAGCGTGCGGAGCGACACGTCTTCGCCGCCTTCGTCATCCGGCGGCGGCGGTAAGCACTCGATCAACATGAGGGAAGTAATTGCAAAGAGCATCACGCACAAGTTCCAGAACACGGCCAATCAGCCGCTGCCGCCGCCCATACCCGCGGTCGAGTCGTTCGCCCGCGCTTACCACCAGTACCAGCAACAGCACCAGCACCACCAGCAGCAGAACATGCCCTCGGCCGTGGCCGCGGCCGCCGCCGTGTTCGGTGCCAGCAGTCCCATAGTGGTCAGGAACCATAACAACAACAACCTGCTGGACGACTGCCGGAAACGGGTGCCAACGCCCACCAAATCCACGTCCAATTCGTCCGGCGGCGGTTTTCACGTGAGCGgctcgtcgtcgtcatcgtccaACTCGGCAGCGGCGGCTGCGGCGGCAGCGGCTGCAGCCGCGGCGGCCGGCGGCAAGGGCACCAGACCGAAGCGGGGCAAGTACCGAAACTACGACCGGGACAGCCTGGTGGAAGCGGTGCGCGCGGTGCAGCGAGGCGAGATGAGCGTGCACCGGGCCGGGTCGTACTATGGCGTACCGCATTCGACGCTCGAGTACAAGGTCAAGGAGAGGCATCTGATGCGGCCCAGGAAGCGCGAGCCGAAGAACCCTCCGTCCGCGTCCTCGGTGTCCACCGCGGTCGTCGAACAGGACCGGAAAAAGTCGTCGTCCGAcctgtcgtcgtcgtcggcccGGTCGGCCGTCGACAAGGCGTCGTCCACGACACCGCCGGCCGTAAAGTTGCCCGCGCACGTGTTCCCGTCGCAAcagccgccgccaccgccgcagCTGCAGGCGCCCAACGGGTTGAAGATGTTCGACGCGGCCGGCCCGGTGGGCCCGTTCCAGCCGTCGTTCCCGTTCTGGGCCCCTAACCCGTTCCACGTGCCCATGGACTTCGCGCGCAGCTCGGTGGGTTTCCCGCCCATCTCGATGATGCATCGCATGCCGACCGCCGAATCGCGGTTGCACCATCACCACCAGGCTGCCGCGGCCATCGCCAGCCTGGGCAAAAACGCACGCGAGGTGGCCGAAAACCTGTACGACGGCACGGACAACGGCAGCTTTTTGGACGGCATAATACGGTCCAGCCTGGAGACCGGGCTCAAGTCGGCGGCCCAAGCGGCCGCGGCCCAAGCGGCTTGCAAGGGGTCGTCCGGCGAAGTCGGTGGCGAGAGTCCGGAACGCGCGGACGACCAGTCGGTAGCCGACGAGAACGGCACCGGACTGCACGCCGAAGACCGCGCGGCCACGCCGCAATCCTGCAGGGACTCGGCCACGGACAGCGATGAAGACGagaagcagcagcagcagcaaccaCCGGGATCGGATTCGCCGGCCGGACCGGAGCAGCTCGAGGACGCAGAACAGTACGACGCCGTCGCCGAGCGGACGTCGGACTTGTCGCCGGAACACGTGACCGAAACGGAAAACGACGACTAG
- Protein Sequence
- MGRRKWHQYQDILTKNYLLEEELMDRREWVPVKSFNSCDVNTDLSVADQSPAELEPSSETGSLSGGSRSAESPEPEPGRRPSSTPPPAASEPYRVDDRSPPPLLLLSNASSAAAAAMAAVASLNNSSPSSATAAPAAGPPSPGALDAAAAAAGLPRWLLAAATLRLQETTAAAAAAASAAAAAAAASAGGRLPADPQHHRHGQQQHHHQQPLDQPLDLSAKGNSNSNSNNINNGTTTGNASSSSATSTPTCPSASSTPSSELKNVANAAAVNPFTPDLIATDMMNKLHNLIPGPSTFLPHQSLNAPASLNTGGNRNALKLKTTKQTSHMAGRKTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKQLALERDSGGGIRDASASVDDPGTVVSAELLEEDDEDDRDTASAGEDDFSKSTPDNREHHQHHVHQPPQRQQSHQLPNRVPQPACRTSASPYMTIEELIRLSTEQQQQQQQQQQQAVPTAETLRLFLQHYTNNKLRTDYRHGGVDGTADSRRSPSPSTVAATRLPPPPMTADLWPAAAAAAAAAVALDPQHMGTYLAQLLSSSVTTAPPSAGLGSPHLPAHGSPPPQQQQQPPQHQQDFLKEFTVKEMMRKMLDDEQQRYVGKSLDPRRWSSNGCGSSEPMDTGRSNDDDSNQSVILKVPQYKPAPGAKGPECEAAGGRELRSPGRANSVRSDTSSPPSSSGGGGKHSINMREVIAKSITHKFQNTANQPLPPPIPAVESFARAYHQYQQQHQHHQQQNMPSAVAAAAAVFGASSPIVVRNHNNNNLLDDCRKRVPTPTKSTSNSSGGGFHVSGSSSSSSNSAAAAAAAAAAAAAAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKNPPSASSVSTAVVEQDRKKSSSDLSSSSARSAVDKASSTTPPAVKLPAHVFPSQQPPPPPQLQAPNGLKMFDAAGPVGPFQPSFPFWAPNPFHVPMDFARSSVGFPPISMMHRMPTAESRLHHHHQAAAAIASLGKNAREVAENLYDGTDNGSFLDGIIRSSLETGLKSAAQAAAAQAACKGSSGEVGGESPERADDQSVADENGTGLHAEDRAATPQSCRDSATDSDEDEKQQQQQPPGSDSPAGPEQLEDAEQYDAVAERTSDLSPEHVTETENDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01346375;
- 90% Identity
- -
- 80% Identity
- -