Smay019544.1
Basic Information
- Insect
- Sipha maydis
- Gene Symbol
- ARID3B
- Assembly
- GCA_034509805.1
- Location
- JASXSY010001228.1:54124-68850[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-17 4.7e-14 53.7 0.0 27 89 2 62 1 62 0.94 2 2 0.031 1.1e+02 4.5 1.8 35 86 109 157 102 158 0.76
Sequence Information
- Coding Sequence
- ATGGCGAAACGAGTGTTAGACTTGTACACCTTGTACAAGCTGGTTGTTCAAAGGGGTGGGATCGTGGCTGTCATAACCAAAAAACTTTGGCAAGAGATAATCCGAGGCTTGGGCCTCCCGCCGTCCATCACAAGCGCGGCTTTCACACTACGCACgcaATACGTCAAGTACCTGTACGCGTACGAGTCTAAGATAAATAGGTTCAGCTCGGTGGACGAGTTGAACATGGCCATAGCGGGCAACAGGCGCGAGGGTCGGCGGAATAAATCGTTGCTGTCCGAGTATTTGCCTTCGCTCCCGGTCTCCGCCGCCGGGCACCACCACCATATGCCGTCGGCTGTATTGTCACCGGGTTCGCACCAACAGCACCAGCAGCACCAGCACCATCAACAGCTTCAACAGAAGCACCAGCAGCACCAGCACCAgcagcaccagcagcagcagcaacagcattACGCCAACGTGCTGGCCGCCGACGATCGGTTCCGTCATTTCGCCGCCGCCATACTGGACAACAGACACCGCGCGGCCGCCGCAGCCGCGGTCGCCACGGCCGCCGCCGAACAGCAGGTCAGACAACAGGCGCCGCCGCAGCCGTCGTCGTCCTCGTCGTCCCCGCGGCCGGCCAGTCCGCAGCGGCACGGGCACATCCCGTCACTggcagccgccgccgccgccgccgcagccgccGCAGACGCTTCGCAGTTCAACGGCCATCTCCCACCGATGCCGTATCAGTCGGCCTCGATGATCGCTGCTCATCAAGCGGCCGCTGTGGCCGGCGACCACTCCAACAAACAGAGAGAAATACTTAGCATGTTGATGTGGATGGATTTGATGAGAGCTAATCAGTCGACAATTTCGAGACATTCAATACCGAACTTGCAGCCCAATACGTTGCCGTACAACGCTGCTGCGGTTGCGGCCGCGATGAACTTATCGCCGATCGTGCTGCAGCAAAAGGGATTGATACCGGAACAGTGCGAAGCATTAAACTTGGGAAAAAAATGCCAAGGGACGAACAATAACAACGCGGGCGAGAATGACGACGAGCCGACCGCGAAACGGATCAAAGCAGAACATTCCCCCGGGGGAGCGAACGAAAATAAAGAGAGTCCGAAAATGAAGAGCCCGAGCCCGGTGCGTAACTCTATCTCTCCCGGACGCATAAGCGCCGACGAAAACGAGAACGACGATCACAGCAGTAACATGATCGAAATGGATATCGACGTGTCCGCCGGTATGTCAAATGGTCTCAACATATGCGTTTGTAAAAGGACTAGAGACGGTATTTACAAGGGTCAACTCGTCAAGGTTGAATCttCCTTTATACTGCGTCTGAACGGCGAACTCTATACTGGATGTCTACAATTACAGAACAATACTATTAATCATGATGATGAAAAGATATGTAGTTAA
- Protein Sequence
- MAKRVLDLYTLYKLVVQRGGIVAVITKKLWQEIIRGLGLPPSITSAAFTLRTQYVKYLYAYESKINRFSSVDELNMAIAGNRREGRRNKSLLSEYLPSLPVSAAGHHHHMPSAVLSPGSHQQHQQHQHHQQLQQKHQQHQHQQHQQQQQQHYANVLAADDRFRHFAAAILDNRHRAAAAAAVATAAAEQQVRQQAPPQPSSSSSSPRPASPQRHGHIPSLAAAAAAAAAAADASQFNGHLPPMPYQSASMIAAHQAAAVAGDHSNKQREILSMLMWMDLMRANQSTISRHSIPNLQPNTLPYNAAAVAAAMNLSPIVLQQKGLIPEQCEALNLGKKCQGTNNNNAGENDDEPTAKRIKAEHSPGGANENKESPKMKSPSPVRNSISPGRISADENENDDHSSNMIEMDIDVSAGMSNGLNICVCKRTRDGIYKGQLVKVESSFILRLNGELYTGCLQLQNNTINHDDEKICS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01169643;
- 90% Identity
- -
- 80% Identity
- -