Smay033966.1
Basic Information
- Insect
- Sipha maydis
- Gene Symbol
- Xbp1
- Assembly
- GCA_034509805.1
- Location
- JASXSY010002626.1:34831-39510[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-14 1.5e-10 42.1 10.3 1 64 52 115 52 116 0.95 2 2 0.092 1.9e+02 3.3 0.7 42 55 107 120 104 122 0.65
Sequence Information
- Coding Sequence
- ATGGCGCCCAACGTCATCCGGCCTAATCAGATGCTGATCTTAAACTCGGCCATGTGTTACGTGGAACAGCGACAGGCTGTATCGGACGACGAATACGAGTCGACGTCGCCGCGATCGCCGCCGGCCAAAAGGACGTACGTGAAGAACATATCGCCGGAAGAGAAGATATTGCGCAAaAAATTACGCAACAGAGAAGCAGCACAATTATCAAGAGACAAAAAGAAAGCACAATTCAATCTTCTATCTGGAATGGTACATGGCTTAAGGAAAGAGaatttacatttaaaagaaGAAATAGAATCGTTACGATCTAATCAAGAGAAGTTAATGGCTGAGAATGAAAGATTACGTGAACAACTTGCCACAGACTCATTTGTACCAAAAGAATCAACACCCTCTGCAGAAGGGCAAACTGAATCGAATATCCTGTTTGATGCTATGTTGTCAGATCCTGTTCCTATTACTGACAGTTCAATTCTTCATGGTCTCAAACTTTCAGATGACGACAACATGGATTGGTTTGATAGTAATGTATCAGAACGTTTATCAAAAATCGCTGATGAACTACTTAGTGAAagttTTCTCAACGAATATTGTCTGGATGAAGTGGTGGGGAGCACATCAGAAATCATGGAACCCAgccaaaatattgattttcacCATATAGATATTAAGAATGATGATTCACTGTTCATGCCAAATACAGATACAGAAACATCAAAGATTTCTAATGAAAAAACACAAATCCCAACATTAGATGTTGAGATTAAACCTAAAGTTGAAGAAGAGTTGGAAAACGCAAGTAATGATTCTTTAGAACGTTTTATTATAGTAGAAGAAGCTGTTGAAGAAATAACAACTTCTTATGATGAGCATATTCTTGAAATATGTCAAGATGATGATAACATGGACACGGAACAATATGATGATATTGGTTATGAATCACTTAGTTCTCCAGAATATGATTATAGAGCACATTACTCAccacaaatattaacaaatttgcTTTCATAA
- Protein Sequence
- MAPNVIRPNQMLILNSAMCYVEQRQAVSDDEYESTSPRSPPAKRTYVKNISPEEKILRKKLRNREAAQLSRDKKKAQFNLLSGMVHGLRKENLHLKEEIESLRSNQEKLMAENERLREQLATDSFVPKESTPSAEGQTESNILFDAMLSDPVPITDSSILHGLKLSDDDNMDWFDSNVSERLSKIADELLSESFLNEYCLDEVVGSTSEIMEPSQNIDFHHIDIKNDDSLFMPNTDTETSKISNEKTQIPTLDVEIKPKVEEELENASNDSLERFIIVEEAVEEITTSYDEHILEICQDDDNMDTEQYDDIGYESLSSPEYDYRAHYSPQILTNLLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01169608;
- 90% Identity
- -
- 80% Identity
- -