Smay033422.1
Basic Information
- Insect
- Sipha maydis
- Gene Symbol
- Atf6
- Assembly
- GCA_034509805.1
- Location
- JASXSY010002548.1:243976-249631[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.1e-14 1.3e-10 42.3 5.6 3 55 250 302 248 308 0.95
Sequence Information
- Coding Sequence
- ATGGATGTATTAGTCGAACCTAAAGATGAATTACTTAggTTTGATGAGTTGAAGGTAGAACCATTTTCGGAATACTATGAAGatgacttaaaatttaattcaggAATTAATGATCTCAACAATGATTTGACAATGCAATGGAACATTGAATCTTGTTTTGGAAAtgGTATTGACTTGGAACAACATGATTCATCTCCTCCATCATCTCCTTCGTCTAGTGGATCAACACCAAGTGGTGATTCTCAATCTTCTTTTGATTCAAATCAAgtaTTATCAAGAATATTATCACCAAATATAAGTAatgagaataatattaaaaatgttagtgCTACCAATACTGTAATAGCCCCGGAATGTAtagatataaatcaaaaaagttcaaaacttaaaatattaccagCTCCAATTAAACCAGCATTAAATACACATACTTCTAATGCCAATAattctttaatatataataattttaatgttTCTTCAATGTTGACCGATCAAACAAATCAATCATCAATCACAATTTCAAAAtcttttgttccaagaaaaattatacttactcctgatcaattttcaaaaataaccaaattacaaaaacaaaaacaaactgATTTACACATATCAACTGCACCACTAGCATCAAGTACATCATCAGAAGTTAATACTCGATTGTCATTGCCAGTATTAGAAGTTGATCCCACAAAATCTAGATGTAATTCTTCCACCACCTTACAATATAAccaaatcaGTGCAATAAAACGCCATCAACGAATGATAAGAAATCGAGAAGCAGCAAGTTTATctcgtaaaaagaaaaaagaatatttaacatctttagaagaaaaaataagcaTACTGCATAAAGAAAatttggaattaaaaattgaAAATTCAGCATTAAAAGAAAGgcttaaaatttttgataaattatccTCAATGACAGATAGACCTTTGATCAAAAGAGTAAAAAAGGCTACAGCTATACTATCTGTAGTTTTAATGATTTCCTTAAATGTTGCACCTCTaggacttTTTAATTCAAAGCAAATTGATAACTCTTTGATGAAAATGAATCtgggtaaaaatttcaaaacaaaaagtattgaaaacttaaattttcaaagtagaAATTTGTTGTGGGCAAGTGATTTTGAAGACACCAATTCAACATTAAATTCTACGGAGCATCTAATGTGTCCAACTTTCATAAACATTTCCGAATCAAAAAGAATTGATAGTGAATTGCGAAAATGGATTGAACCAAGAAATTTGAAGCTGTTGAATGATAACTTATCAATGGTTTATGTTGAACCAAAAATTATTAGTACTAATATTGAACaaggtaaaaataatgaatatgttgcaaagaaaaacaaaaaaatggatACAATTCCAAAAAGAAATTTTAAaaaaagaaagcatatttcatcaaataatgATTTCATAGAAATATTTGGACACTTGAAATTAAATAGCAAAGAAAGTTTATTTGACTCCATTGAAAGGCAAGATGACACATTTTATGTCGTATCATTTTCTGGAGACCATTTACTATTACCACCCAGTCATAATGCTTCTAATACTACTATTCGACCAAAAATGTCACTTGTTTTCCCAACTTTATCATCAAATGgttCAGATTTTGTCACAATGATTCAAATAGATTGTGCTGTAACTGACACAAAAACATTACAGATACGAGATACTCATTTAAgacataatgattttaaaaataacatttcttcTAATTCAAAACAACATCATgATCATAGAAACAATATAGCACACAAACCATATTTTGTACGACAAAACTATCGTGGTTCAATGTTAAGTAAAATGAATCCAGAACTTCCAagttactaa
- Protein Sequence
- MDVLVEPKDELLRFDELKVEPFSEYYEDDLKFNSGINDLNNDLTMQWNIESCFGNGIDLEQHDSSPPSSPSSSGSTPSGDSQSSFDSNQVLSRILSPNISNENNIKNVSATNTVIAPECIDINQKSSKLKILPAPIKPALNTHTSNANNSLIYNNFNVSSMLTDQTNQSSITISKSFVPRKIILTPDQFSKITKLQKQKQTDLHISTAPLASSTSSEVNTRLSLPVLEVDPTKSRCNSSTTLQYNQISAIKRHQRMIRNREAASLSRKKKKEYLTSLEEKISILHKENLELKIENSALKERLKIFDKLSSMTDRPLIKRVKKATAILSVVLMISLNVAPLGLFNSKQIDNSLMKMNLGKNFKTKSIENLNFQSRNLLWASDFEDTNSTLNSTEHLMCPTFINISESKRIDSELRKWIEPRNLKLLNDNLSMVYVEPKIISTNIEQGKNNEYVAKKNKKMDTIPKRNFKKRKHISSNNDFIEIFGHLKLNSKESLFDSIERQDDTFYVVSFSGDHLLLPPSHNASNTTIRPKMSLVFPTLSSNGSDFVTMIQIDCAVTDTKTLQIRDTHLRHNDFKNNISSNSKQHHDHRNNIAHKPYFVRQNYRGSMLSKMNPELPSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01346225; iTF_01169605;
- 90% Identity
- iTF_01346225;
- 80% Identity
- -