Sflv012082.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sipha flava
Gene Symbol
gata5-a
Assembly
GCA_003268045.1
Location
NW:1022353-1065190[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.1e-18 1.7e-14 52.6 3.2 1 34 695 727 695 729 0.97
2 2 1.9e-18 4e-15 54.6 4.0 1 36 750 784 750 784 0.97

Sequence Information

Coding Sequence
ATGCCgaccaacaataataacaacgcCACTTACTTGAGAGCTTTTGGTAAGTGCACAAACGGTTTGCCGGCAACGACAGGAGAAGAATCGTTGTTGGAACACCACCACCATCATGTGGTCGTTATCGGTGGCGGTGGAAGAGATTCCGGGGGTGGTGGTGAGTTTGACACGTCAGCCGAGGAAGACAGAGCAGCGGCGGACACCATAGACGAGCTGAACAGCCGTCGTGGCGACATAAACAATACGGTGGTGGCCGCCGATCCAGACGACGAGCCGTCGCCCGTCGTTGAGACGATCGCGGCGTCGCAGCATTGTTGCGGCGACGGCGCGGCCGATGTAGCGTCAGTGGCGAACGAAGAAAATGGCGGCGGCATCGCGGGCACGCCCAGCATCGGCTACGGGTCGCCGGCGGTAGATGGTGCGCCGGTCGGTAGGACGTCGTTCGGTGCGGAGGAGGAGGAGCCGGCTGTCGTCGACCGTTTACAGCAACAACAGGTTCACGGTACGACAGACGAACGGCCGACTGGCAACGTGTACGAGCACCGTGATGATATGAACTATCATCAACATcaccaccagcagcagcagcagcagcagcgaaCCAGTCCGTCGCAGCAAAACGTCGCAGTCAGCAGTAGCAACAGTAACAGCAGTGGCAGCAACAGCGCCGGCAACAATAATACTACTAATAACGGACCGTCGACAATTATTAACCGTTACGACATGATAGTGGCACAGAATTATCAGCAATCCAAGTACGGCAATAGTCGGGACTTGATCGCCTCGATTTTCCCACAGACCCTAACCACGGATCAGCTCCAGCAGCAACACCAGCAGCAACGTGATGATGAAGAAGATTTCTACGAGTACCAGCAGGTGTaccagcagcaacagcagcagcaggcCAAGTTCGAACACATTGTGTTGAAGCAAGAGCCGCACGTGTATACGGACGAGTACTTTCACCAGGAACACCAACCGCAGTTGCAGTTGCAGCATCAGCAGCAGGACCATTGCTCCAGTCCGGGCAGCTCGGCCGGCGCATATGACGAGGAGGTGGTGGCCGCTAAGGGCGGCGAATTACTGGACTTGCACATGTCTCGCGCGGACGATGGAACCGTCACTGTGCAGTCCAACCCTTTCGTTCACCTAGTGGCCTCGTTACACAGCGACTCGGGCAGCGTGTCGCCCATGCAGGGTCACCTGCAAGATGACCAACAGGGCTCCGGGGGTGGATCACCTACTGTCGTGTTACAGCAGCCTCACGTGGCCGATCACTCGTACACGCCGTCGTCCGCGACCACCGCCGAACAACAGTTAACCCAGCATCTGTCGCAGAACCATCACAGCGTCGTTTACCACCCGGGTGCCACTAACGTTATTCACCATAACAACAGCGGTTCCAGCATCTCGGGCTCTTCCATGTACCCGAGAAGTAACGGAGCCGGCTTGTACTCGGCAACGCTGCAGCAGTACTTCACTTCCTCGCCCGAACTCGTGGCCCAGCAGCAGaccacaaataatattatcacgtcCGTTGCCGGCAACCACATGTGGTCCACAGTCGTTTCCGATGACGGTACCGAAGTGTATTCGCCAACATCGtccggtggtggcggcggcggcggcggcggcggcggcggcagtggctccaaacagcaacagcagcagcagcagcagcaacaacagcaacagcaacagcagtcTGGACACAACGGCGGCGGCGGGCTACCGGCTTTCGGGCAACGTTTCGTCACGCACACGTCATCCGCGTACACGTCGCCCGGTACGTCGCGCTCGTCCGCGTCCTACCACCCGATCGCCACCTCCGGCGTTGTGCCGTATCACTTGGCTCCCGCGGCCGTCGTCAACAACGCCAGCGGTTCGTCGGATCCCTCTACGCTGCAGTGGGCCACGACCGCGACCGTTGCGACCCACGGGTACCCGAATACCGACGGTTCCATAAACTACGTTCCAATAGCCAACAACCAGACGAGCAGGAGCCGGTCGAATGCCACGTTCTCCGCGGCCGCGTCCCTCCACGCCTTCAACGAGATGGAAATGTTATGCGAGGGTCGGGAGTGCGTGAATTGCGGAGCGATTTCCACACCATTGTGGAGACGCGATGGCACCGGCCATTACTTGTGCAACGCGTGTGGACTTTACCACAAGATGAACGGCATGAACAGACCTTTAGTGAAACAACCCAAACGGCTGCAAAACGCGTCTAGGCGTCAAGGACTGCATTGTACAAATTGTTCGACGTCCACCACGTCATTGTGGCGCAGAAATCAAGTGGGTGAACCAGTGTGTAATGCCTGTGGTCTGTACTATAAGTTACATAGCGTCAAGAGACCACTTACAATGAAAAAGGACTCTATTcagacaAGAAAACGTAAGCCTAAGAGTGGAACTAAAATTGACCCAGAACCTAAGAGGATCAAACAAGAAATACcaTCTGAACACAACTATAGTGATTGCCATCGTACTTCGGGCAGCATTTTAAATCATGGCAGTGCTAGTTATACCAACTTGTATCAGACAGCCACACATATAACCCCATACTACGATGTTATAAAGTCGGAACCATCGCAAGAGTCTATTAACAGTCCACATATAGTAAGCCTTGCATCTGCCagtaacaacaacaacaataataataacaacaataacacaaGCAACAAAGATAGACCTAGTGTCTTATCAATGTCTGTAATTTcctaa
Protein Sequence
MPTNNNNNATYLRAFGKCTNGLPATTGEESLLEHHHHHVVVIGGGGRDSGGGGEFDTSAEEDRAAADTIDELNSRRGDINNTVVAADPDDEPSPVVETIAASQHCCGDGAADVASVANEENGGGIAGTPSIGYGSPAVDGAPVGRTSFGAEEEEPAVVDRLQQQQVHGTTDERPTGNVYEHRDDMNYHQHHHQQQQQQQRTSPSQQNVAVSSSNSNSSGSNSAGNNNTTNNGPSTIINRYDMIVAQNYQQSKYGNSRDLIASIFPQTLTTDQLQQQHQQQRDDEEDFYEYQQVYQQQQQQQAKFEHIVLKQEPHVYTDEYFHQEHQPQLQLQHQQQDHCSSPGSSAGAYDEEVVAAKGGELLDLHMSRADDGTVTVQSNPFVHLVASLHSDSGSVSPMQGHLQDDQQGSGGGSPTVVLQQPHVADHSYTPSSATTAEQQLTQHLSQNHHSVVYHPGATNVIHHNNSGSSISGSSMYPRSNGAGLYSATLQQYFTSSPELVAQQQTTNNIITSVAGNHMWSTVVSDDGTEVYSPTSSGGGGGGGGGGGGSGSKQQQQQQQQQQQQQQQQSGHNGGGGLPAFGQRFVTHTSSAYTSPGTSRSSASYHPIATSGVVPYHLAPAAVVNNASGSSDPSTLQWATTATVATHGYPNTDGSINYVPIANNQTSRSRSNATFSAAASLHAFNEMEMLCEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPKRLQNASRRQGLHCTNCSTSTTSLWRRNQVGEPVCNACGLYYKLHSVKRPLTMKKDSIQTRKRKPKSGTKIDPEPKRIKQEIPSEHNYSDCHRTSGSILNHGSASYTNLYQTATHITPYYDVIKSEPSQESINSPHIVSLASASNNNNNNNNNNNTSNKDRPSVLSMSVIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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