Basic Information

Insect: Sipha flava
Gene Symbol: zld
Assembly: GCA_003268045.1
Location: NW:2380172-2386180[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00023 0.02 14.9 0.9 1 22 289 310 289 313 0.90

2 5 1.2 1.1e+02 3.1 3.5 2 19 733 750 732 755 0.87

3 5 7.2e-05 0.0063 16.4 1.2 1 23 761 783 761 783 0.98

4 5 0.00022 0.019 14.9 2.1 1 23 790 813 790 813 0.96

5 5 0.0044 0.38 10.8 7.3 1 23 819 841 819 841 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00023	0.02	14.9	0.9	1	22	289	310	289	313	0.90
2	5	1.2	1.1e+02	3.1	3.5	2	19	733	750	732	755	0.87
3	5	7.2e-05	0.0063	16.4	1.2	1	23	761	783	761	783	0.98
4	5	0.00022	0.019	14.9	2.1	1	23	790	813	790	813	0.96
5	5	0.0044	0.38	10.8	7.3	1	23	819	841	819	841	0.99

Sequence Information

Coding Sequence: ATGGAAATGCAGATCAGTAACGCGTCCGAGTTCCCGCTGTACCACTCGATGGCCGCGGGACCCCACTCGTTCCAACTGCCGGGCGCCATACCGCCCGTCAGCACCATTCCGTCGTATAAGAACACCATGTTCCCGGACCGATTGGGCTTCTACTACGACTCCGCGGGCGTCACGCACACAATGCCCACGGAACGGTGCGACCGATGTTACGTTGAACTGCCGGCAATCGGTGCCGGCCACCAATTCGGCAAGAAGCTGTGCGGCATGTGCGCGGCCAAGGAACAGCAAGTGTCGCCCAAGGTGGAGACCGAGATACTGGACCTGGACTCGCAACAAGTCATGtcgcaacagcaacagcagcagcagcaacaacagcagcaggaCTCCAAGGCGTTcttgcagcagcagcagcagcaagaCTCCAAGGCGTTCTTACAGCAGCAGCAGGACTCCAAGGCGTTCTTGCAGCAGCAACAGGACTCCAAGGCGTTTCTGCAGCACGGCGGCGGTGTCGTCGTGCCGCCCGGCTACGACCGGCCGCCcccaccgccaccaccgccaACGGTCGAGTGGCCCGGCTACTTTCAGCCGCAGCAGAACACGCTGTCCGGCGAGCACCTGTCGCCTGACTACAACAATGTGACGACCACCACGACCACACCACCAACCATGATGGGTGGGTCGCCGCCGTCCGACatgcaacagcaacagcagtaCCAGGCCAACTTtgacggcggcggtggtggtggtggaggCGGCGGTGGTTACGCGGTCAATTCGAACCAACAGtccggcggcggtggcggatCGGCGACTAAGGGCAATGGGTCGTGGAAGTCCAACGAGGCGCGGCGCGCAAAGACGTACGAGTGTCCGGCTTGCGACAAATGGTTCACCAGTTCGGGTCATCTGAAACGGCACTATGGCACGCAGCTGCACAAGAACGCGGTGAAGCAAAGTGGCAAGCCTGACCCCGCGCTGTTGCCGATGAAGCATCACTATCACCCGTACCGGGACCCCGCGTACGTCGCCCAACAGAAGCTCAAGCAGCAGCAGCAGAACGGCTCGTCTTTGCACAAACAACAGTCGTCCATGATGATGTCAGCAGACTTCCGCCCCGTCACGTCCACGTCATCGTTCAACACCGATTCTTTTTTAGAGCTGACTCCCCCAAACCTGACAGCAAGCCTCTCGGACAGTTTGGGGGGAACCCAATTCCTACCGGCCCGTCGGCCGgtcagcaacagcagcagcagcaacagcaacagcagtaCGGCAGGTTTCACGGACGAGATCCAAATTTCTTCGTACcccagcaacagcagcagccgCAACAACAACAGCTACCCGGTGGACCCAATGGTGGACCCTACGGCCCGCCCCCACCTGGCCACATCGTACCACGACCACCACCGATCGTCGATGGCGGATCAACAAGCGCGTTCGGCATACCGGCACCCCCAGATCACGGGTACCATCCAGCCCTACACCACCCAGGTTTCTATGATCCATCAAATTACCAACACGGATTCGTACATCACTATGCCCGATAATAACGGTGTCGGCGGCTATCACTACGATCATCATCTCCATCAGTATCATCCTCACAACATTATCAGTGATCACCatcagcaacagcagcagcagcacaaCGTTGACTATCAGCCGTCGTCAACGTCGTCCACGTCGTCGTAtctgcagcagcagcagcagcaacagcaacaacaacaacaacagcagcagcagcagcagcagcaacaacaacttCACCACCATCAACAACAACATCGTCAACAGCAACACCAGCCGTTCCAGAGATTGTCCACGCTCATTAAACAGGAACCAAACGATTTGGCCGAATTCAGCGCGGACGATACTTCGATGGCCAGCCCGGACTCAAGCATCGATCACCACAACAATCAGCATTACAGAGGCTTGTTGGTGGTGGCGCCTTTATCTTCTCCGCCGCCTCTGCAGCCTCCACAGCCGCAACCCCATCAGCATCATCACAATCAGCATCAGCACCATCAACATCATCAACACCAGCTGCAGACCGCAGTCGACGACGACGCGGTGGTCAGCGACAGCGGCGGTTCCGTCGACCTGGACTTCGGGTGCGGTGGCTCGGCGGAactgtcgtcgtcgtcatcaccCTCGCAGCACGCGGCCAAGAAGTTCCGGAAGGCCACGCGTGTCACGTGCGTGCTGTGCAACAAGGACTTCACGGACAAGTGTTACAAGACGCAGCACGACCAGCGGTTTCACAGTGGCGAGAAACCGTACCGGTGCGGCGTGTGCGGCAAGCGGTTCGGCGAACACAAGCAGTTGCAGGTGCACGAGCTTCGGCACAATGACAGCAACAAAGCGTTCCCGTGCACCATGTGCACGAAGAGTTTCAACTTCAAAAACGACCTGGACCGGCATTTCATGTCCAGCCACTCGGCCGAGAAACCGTACCAGTGCGTGCAATGTAAGAAGAAGTTCGTGCGGCTGGACCACAAGCGGCACCACGAGAAGACGCACGGCGGTGCCGTGGAGAagacgaaaaagaaaaagaaagccGTGGCCGAGCTAGCGCAGTCCACCGGCGGCCACTTCGAAGACCAGTCCTAA
Protein Sequence: MEMQISNASEFPLYHSMAAGPHSFQLPGAIPPVSTIPSYKNTMFPDRLGFYYDSAGVTHTMPTERCDRCYVELPAIGAGHQFGKKLCGMCAAKEQQVSPKVETEILDLDSQQVMSQQQQQQQQQQQQDSKAFLQQQQQQDSKAFLQQQQDSKAFLQQQQDSKAFLQHGGGVVVPPGYDRPPPPPPPPTVEWPGYFQPQQNTLSGEHLSPDYNNVTTTTTTPPTMMGGSPPSDMQQQQQYQANFDGGGGGGGGGGGYAVNSNQQSGGGGGSATKGNGSWKSNEARRAKTYECPACDKWFTSSGHLKRHYGTQLHKNAVKQSGKPDPALLPMKHHYHPYRDPAYVAQQKLKQQQQNGSSLHKQQSSMMMSADFRPVTSTSSFNTDSFLELTPPNLTASLSDSLGGTQFLPARRPVSNSSSSNSNSSTAGFTDEIQISSYPSNSSSRNNNSYPVDPMVDPTARPHLATSYHDHHRSSMADQQARSAYRHPQITGTIQPYTTQVSMIHQITNTDSYITMPDNNGVGGYHYDHHLHQYHPHNIISDHHQQQQQQHNVDYQPSSTSSTSSYLQQQQQQQQQQQQQQQQQQQQQQLHHHQQQHRQQQHQPFQRLSTLIKQEPNDLAEFSADDTSMASPDSSIDHHNNQHYRGLLVVAPLSSPPPLQPPQPQPHQHHHNQHQHHQHHQHQLQTAVDDDAVVSDSGGSVDLDFGCGGSAELSSSSSPSQHAAKKFRKATRVTCVLCNKDFTDKCYKTQHDQRFHSGEKPYRCGVCGKRFGEHKQLQVHELRHNDSNKAFPCTMCTKSFNFKNDLDRHFMSSHSAEKPYQCVQCKKKFVRLDHKRHHEKTHGGAVEKTKKKKKAVAELAQSTGGHFEDQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01170177;
90% Identity: iTF_01347565;
80% Identity: -