Basic Information

Insect: Sipha flava
Gene Symbol: Hinfp
Assembly: GCA_003268045.1
Location: NW:144570-147719[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3.5 3e+02 1.7 0.4 1 23 121 145 121 145 0.90

2 8 0.01 0.87 9.7 0.4 1 23 260 284 260 284 0.97

3 8 0.016 1.4 9.0 3.1 2 19 291 308 290 311 0.93

4 8 0.0087 0.76 9.9 4.3 2 23 319 340 318 340 0.97

5 8 3.4e-07 3e-05 23.7 2.5 1 23 344 367 344 367 0.97

6 8 0.00024 0.021 14.8 3.4 1 23 373 395 373 395 0.99

7 8 0.00063 0.055 13.5 2.4 1 23 401 426 401 426 0.97

8 8 0.96 84 3.4 1.4 1 23 436 459 436 459 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3.5	3e+02	1.7	0.4	1	23	121	145	121	145	0.90
2	8	0.01	0.87	9.7	0.4	1	23	260	284	260	284	0.97
3	8	0.016	1.4	9.0	3.1	2	19	291	308	290	311	0.93
4	8	0.0087	0.76	9.9	4.3	2	23	319	340	318	340	0.97
5	8	3.4e-07	3e-05	23.7	2.5	1	23	344	367	344	367	0.97
6	8	0.00024	0.021	14.8	3.4	1	23	373	395	373	395	0.99
7	8	0.00063	0.055	13.5	2.4	1	23	401	426	401	426	0.97
8	8	0.96	84	3.4	1.4	1	23	436	459	436	459	0.91

Sequence Information

Coding Sequence: ATGAACCCTGAACGCAACAGTGACACCGGTTTCCTGTGCAAGAGGGAACGGAGAACCGAAGAATCGAATGATGACTCCATGTTTGCCGCGCAAACATACTTATCCGTTGATCAAAAAACTGACTGTGGTTCCATGTCCATGATGAAGGACAAACAGTACTGGTGTCAACAGTGGGTTTTTGCTCATCGTGAAGGAAATGtagcagaagaaaaaaaatatgttgcgaaaaaATGTGTAGTTACCAATAGTTTTGATGACACAGCTTCTTATGAGTCAAGtttggatttaaataatttaaaaaaacgtatGAAGCAACCTTCTAGGATAAAGAAACTTGATTTGGATAAAGTAGAAATGAATTTCAGCTGCGCATGGGAAGAATGTGATTACGAATCATCACatatcaatgattatttttatcatgtcAGTGGACATGTTGATTACTTGTGGACTGAAGAATGGCAAAGCAATAAAGATAaatgGTTTACATGCTTATGGAACAGTTGTACATTTCAATCACATTGTGAGGTGAAATCTACCACACATGTGAATTTCCATGCATACCATACACGTCTTAAATGTATTGGTTTAGCGGTTTTAACTCTTTGTGAAATTCCTgGATGCAAGTTAAATGGTGAAGGTACTAATATCTTGCCAGATTTACCTAACGAATTTGAATGCAATTGGGAAAATTGTAATGAAAGGTTTGAATGTATGCAGTATTATTCATATCATGTAgctgaacattttcaaatttcagaatttgaaaaatataattttaactgccCATGGAGAgATTGTACTTTACAATTTACTGCACGTTATCGATTAGTTGATCATATTAAGAGTCACACCCAGGAAAAGTCATGTGCTTGCCCTAACTGTGGTATTATGTTTGCTACACACACAAAACTAAAAGATCATTGTCGACAGTCAAATAAAGaCAAAAGCAATCAATGTTCGTTGTGTAAAAAAACGTTCTCTTGTGAACGACTCCTAAAACAGCACGTCCGccttcatataaattattacaaatgtcATTTATGTGACGCATCCTTTTCTAGAGCCTCACAACTGTCCACTCACATACGTTATCGTCACATTGgtataaaaccatttaaatgtaaactatGTGATTCCAAatTTGTGCGGAAACTAGATTTCAACAACCACTTGAAAAAACATACAGCAGGtccattatttaaatgttcaaaagatGACTGTGATTTTTCATGTCGTAGTGAATACGCAATGAGAAAGCATATAAATATGGAACATTACGATAATACtgaagaattatataaatattattgtcatcTGTGTGATGATTTATTTCTCAGAGGCTCATTTCTAACTAAACATTTAGAAATGGAACATAACTTTCATAAGCCATCAGGTTTAAAACGTTTTAGgTACATAGAAGATGATGATGGGTATTATAAACTTCAAATGTCAAGATATGAGTGTCTAGACATTCAagaacaaaagaaaattaagttggtcaaaacaaaacaagttattgttaagaaaaatattcaaactatttCTAATGGTAAGCAGACGCtaaattttaatgttgaaattttaaagGGTGCAAGTGATGAAGATGATGATGAAGATGACTGA
Protein Sequence: MNPERNSDTGFLCKRERRTEESNDDSMFAAQTYLSVDQKTDCGSMSMMKDKQYWCQQWVFAHREGNVAEEKKYVAKKCVVTNSFDDTASYESSLDLNNLKKRMKQPSRIKKLDLDKVEMNFSCAWEECDYESSHINDYFYHVSGHVDYLWTEEWQSNKDKWFTCLWNSCTFQSHCEVKSTTHVNFHAYHTRLKCIGLAVLTLCEIPGCKLNGEGTNILPDLPNEFECNWENCNERFECMQYYSYHVAEHFQISEFEKYNFNCPWRDCTLQFTARYRLVDHIKSHTQEKSCACPNCGIMFATHTKLKDHCRQSNKDKSNQCSLCKKTFSCERLLKQHVRLHINYYKCHLCDASFSRASQLSTHIRYRHIGIKPFKCKLCDSKFVRKLDFNNHLKKHTAGPLFKCSKDDCDFSCRSEYAMRKHINMEHYDNTEELYKYYCHLCDDLFLRGSFLTKHLEMEHNFHKPSGLKRFRYIEDDDGYYKLQMSRYECLDIQEQKKIKLVKTKQVIVKKNIQTISNGKQTLNFNVEILKGASDEDDDEDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01347573;
90% Identity: iTF_01347573;
80% Identity: -