Sflv002575.1
Basic Information
- Insect
- Sipha flava
- Gene Symbol
- RCOR2
- Assembly
- GCA_003268045.1
- Location
- NW:170721-177556[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8e-08 5.3e-05 22.8 0.0 3 46 124 167 122 167 0.95 2 2 8.6e-11 5.7e-08 32.3 0.0 3 46 351 394 350 394 0.97
Sequence Information
- Coding Sequence
- ATGGCTAACGACAATTCAGATTTGAAAAACGGCAATGGCAAACGACCTGCTCCATCTGATATAGCTGCAGACATTGATGATCTAATACAGGAAAATGctGAAAAAATCAGAGTAGGACGTGATTACCAAGCTGTTATTCCAAAATTACTGGTTCTCCCAACACATAGGCGTGAACGACTTAACAAAAAAGCATTATTAGTCTGGGCTCCTACTGAAAATATTTCAGAAGTTAAATtaaatgaatatatattactttCTAAAGAAAAATATGGCTACAATAGTGAACAGGCATTAGGAATGTTGTACTGGCACCATCATGATATGGATAAGGCCCTAAGTGATCTAGCAAATTTTGCACCTTTACCTGATGATTGGACAACTGAAGACAAACTAACATTTGAATCAGCTTTTAATAGTATTGGGAAAAATTTCTTGCGCATTAAACAAAtgatgcCTGACAAGCCAATAGCATCATtggtaaagtattattatttatggaaaaataaaagaaagaagaGCAGTGTGATTGATCGACAAGCCAAGAAATTAGCTAATGTCCGTGCAAATGAGAATCAAAATGGCAGTAGAGAAGGATCTAGTTCAGCAGAATCCGATCCTGATGACAAGaagGATCTTGGAGAAGGAAGTTCAAAACAGTCATGTTCTGTTTGTGGAGTTTTTGTTACTATGCTTCAACAGACACCTAAAGGATCAATGTGTGGAACATGTTATACACATTTTAGgaGAACTAATGGAGGTATTAGACCAACATTAGGTCCTCCACGTCCAAATAATCGTCACTTAAATGTTGCTCGTAATAAACGTTTGCCACCTCGTGGTATGTATGTTAATCATGATGATCTTCAAGCCATTGCATCTAGTCCAGATGCCAAAggagataatattttatcagcaGTGGATGATGAGGTtgtatcattaaaatgtaaaATTCAGTCAAACAAACAAGACATTGGACAGTTGCAAAAGAAGATTAAACTAAATATCAATGAGTACAGAAACAGTGAACCAATATCGCCTCGTATTGTTCCACGATGGTCCAATGATGAAATAATGCTAGCTATTGAAGGAATCCGTAGGTATGGAAAAGATTTCAAAGCTATTGCTGAAACAATGGGAACCAAGAGTCAAACTcacttgaaaacattttatgctCAATATCGTAAACGTTATAAATTAgatgatttaattaaacaatatagaGCTGATCAatgcaatacaattattgaacTAAGTGATGATGATGACGAACAGGTCTCTATCAAAGAAGAAGCGCCACCTTCCGTATCTAGACCCACTACACTATCATCCATGGCTTCAGGAACTCGACTTATTAATCTTTCATTGTCTACTCCTAAAGCACATCAAACGGCTGCTGCTGCAAAGTGA
- Protein Sequence
- MANDNSDLKNGNGKRPAPSDIAADIDDLIQENAEKIRVGRDYQAVIPKLLVLPTHRRERLNKKALLVWAPTENISEVKLNEYILLSKEKYGYNSEQALGMLYWHHHDMDKALSDLANFAPLPDDWTTEDKLTFESAFNSIGKNFLRIKQMMPDKPIASLVKYYYLWKNKRKKSSVIDRQAKKLANVRANENQNGSREGSSSAESDPDDKKDLGEGSSKQSCSVCGVFVTMLQQTPKGSMCGTCYTHFRRTNGGIRPTLGPPRPNNRHLNVARNKRLPPRGMYVNHDDLQAIASSPDAKGDNILSAVDDEVVSLKCKIQSNKQDIGQLQKKIKLNINEYRNSEPISPRIVPRWSNDEIMLAIEGIRRYGKDFKAIAETMGTKSQTHLKTFYAQYRKRYKLDDLIKQYRADQCNTIIELSDDDDEQVSIKEEAPPSVSRPTTLSSMASGTRLINLSLSTPKAHQTAAAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01347030;
- 90% Identity
- iTF_01169774;
- 80% Identity
- -